EnhancerDB
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  3. vista28413[chr19:6062045-6062746]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28413[chr19:6062045-6062746]
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Tissue distribution of vista28413
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Transcription factor that possibly regulate vista28413[chr19:6062045-6062746]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 6062199 6064174 POLR2A UCSC Txn Factor no Conserved 108376706
chr19 6062199 6064174 POLR2A UCSC Txn Factor no Conserved 108376707
chr19 6062073 6062091 RARA JASPAR yes 70793427
chr19 6062073 6062091 RARA JASPAR yes 112253555
chr19 6062080 6062090 GSC2 JASPAR yes 70793428
chr19 6062080 6062090 GSC2 JASPAR yes 112253556
chr19 6062081 6062089 OTX2 JASPAR yes 70793429
chr19 6062081 6062089 OTX2 JASPAR yes 112253557
chr19 6062084 6062098 RORA JASPAR yes 70793430
chr19 6062084 6062098 RORA JASPAR yes 112253558
chr19 6062087 6062097 RORA JASPAR yes 70793431
chr19 6062087 6062097 RORA JASPAR yes 112253559
chr19 6062089 6062097 CREB1 JASPAR yes 70793432
chr19 6062089 6062097 CREB1 JASPAR yes 112253560
chr19 6062092 6062096 ESR1 TRANSFAC yes 70793433
chr19 6062092 6062096 ESR1 TRANSFAC yes 112253561
chr19 6062095 6062105 TEAD4 JASPAR yes 70793434
chr19 6062095 6062105 TEAD4 JASPAR yes 112253562
chr19 6062100 6062111 RUNX1 JASPAR yes 70793435
chr19 6062100 6062111 RUNX1 JASPAR yes 112253563
chr19 6062147 6062161 SPIC JASPAR yes 70793436
chr19 6062147 6062161 SPIC JASPAR yes 112253564
chr19 6062151 6062158 SPIB JASPAR yes 70793437
chr19 6062151 6062158 SPIB JASPAR yes 112253565
chr19 6062151 6062161 GABPA JASPAR yes 70793438
chr19 6062151 6062161 GABPA JASPAR yes 112253566
chr19 6062162 6062166 NFE TRANSFAC yes 70793439
chr19 6062162 6062166 NFE TRANSFAC yes 112253567
chr19 6062168 6062178 MEF2A JASPAR yes 70793440
chr19 6062168 6062178 MEF2A JASPAR yes 112253568
chr19 6062172 6062186 FOXF2 JASPAR yes 70793441
chr19 6062172 6062186 FOXF2 JASPAR yes 112253569
chr19 6062172 6062187 FOXP1 JASPAR yes 70793442
chr19 6062172 6062187 FOXP1 JASPAR yes 112253570
chr19 6062173 6062184 FOXA1 JASPAR yes 70793443
chr19 6062173 6062184 FOXH1 JASPAR yes 70793444
chr19 6062173 6062184 FOXA1 JASPAR yes 112253571
chr19 6062173 6062184 FOXH1 JASPAR yes 112253572
chr19 6062173 6062188 FOXA1 JASPAR yes 70793445
chr19 6062173 6062188 FOXA1 JASPAR yes 112253573
chr19 6062174 6062185 FOXC1 JASPAR yes 70793446
chr19 6062174 6062185 FOXC1 JASPAR yes 112253574
chr19 6062174 6062186 FOXC2 JASPAR yes 70793447
chr19 6062174 6062186 FOXC2 JASPAR yes 112253575
chr19 6062175 6062186 FOXP2 JASPAR yes 70793448
chr19 6062175 6062186 FOXP2 JASPAR yes 112253576
chr19 6062176 6062191 HNF1A JASPAR yes 70793449
chr19 6062176 6062191 HNF1A JASPAR yes 112253577
chr19 6062177 6062185 FOXG1 JASPAR yes 70793450
chr19 6062177 6062185 FOXO3 JASPAR yes 70793451
chr19 6062177 6062185 FOXG1 JASPAR yes 112253578
chr19 6062177 6062185 FOXO3 JASPAR yes 112253579
chr19 6062184 6062199 FOXP1 JASPAR yes 70793452
chr19 6062184 6062199 FOXP1 JASPAR yes 112253580
chr19 6062186 6062189 MYB TRANSFAC yes 70793453
chr19 6062186 6062189 MYB TRANSFAC yes 112253581
chr19 6062189 6062201 IRF1 JASPAR yes 70793454
chr19 6062189 6062201 IRF1 JASPAR yes 112253582
chr19 6062189 6062204 FOXP1 JASPAR yes 70793455
chr19 6062189 6062204 FOXP1 JASPAR yes 112253583
chr19 6062194 6062203 SRY JASPAR yes 70793456
chr19 6062194 6062203 SRY JASPAR yes 112253584
chr19 6062196 6062205 SOX9 JASPAR yes 70793457
chr19 6062196 6062205 SOX9 JASPAR yes 112253585
chr19 6062205 6062225 RREB1 JASPAR yes 70793458
chr19 6062205 6062225 RREB1 JASPAR yes 112253586
chr19 6062206 6062226 RREB1 JASPAR yes 70793459
chr19 6062206 6062226 RREB1 JASPAR yes 112253587
chr19 6062208 6062223 RUNX2 JASPAR yes 70793460
chr19 6062208 6062223 RUNX2 JASPAR yes 112253588
chr19 6062209 6062229 RREB1 JASPAR yes 70793461
chr19 6062209 6062229 RREB1 JASPAR yes 112253589
chr19 6062210 6062230 RREB1 JASPAR yes 70793462
chr19 6062210 6062230 RREB1 JASPAR yes 112253590
chr19 6062214 6062228 STAT1 JASPAR yes 70793463
chr19 6062214 6062228 STAT1 JASPAR yes 112253591
chr19 6062215 6062227 IRF1 JASPAR yes 70793464
chr19 6062215 6062227 IRF1 JASPAR yes 112253592
chr19 6062252 6062263 ESRRA JASPAR yes 70793465
chr19 6062252 6062263 ESRRA JASPAR yes 112253593
chr19 6062288 6062298 SP1 JASPAR yes 70793466
chr19 6062288 6062298 SP1 JASPAR yes 112253594
chr19 6062302 6062311 THAP1 JASPAR yes 70793467
chr19 6062302 6062311 THAP1 JASPAR yes 112253595
chr19 6062305 6062309 LFA1 TRANSFAC yes 70793468
chr19 6062305 6062309 LFA1 TRANSFAC yes 112253596
chr19 6062317 6062333 GLIS1 JASPAR yes 70793469
chr19 6062317 6062333 GLIS1 JASPAR yes 112253597
chr19 6062318 6062332 GLIS3 JASPAR yes 70793470
chr19 6062318 6062332 GLIS3 JASPAR yes 112253598
chr19 6062324 6062342 ESR1 JASPAR yes 70793471
chr19 6062324 6062342 ESR2 JASPAR yes 70793472
chr19 6062324 6062342 ESR1 JASPAR yes 112253599
chr19 6062324 6062342 ESR2 JASPAR yes 112253600
chr19 6062325 6062340 ESR2 JASPAR yes 70793473
chr19 6062325 6062340 ESR2 JASPAR yes 112253601
chr19 6062333 6062340 JUN TRANSFAC yes 70793474
chr19 6062333 6062340 JUN TRANSFAC yes 112253602
chr19 6062348 6062366 RARA JASPAR yes 70793475
chr19 6062348 6062366 RARA JASPAR yes 112253603
chr19 6062359 6062374 NR2C2 JASPAR yes 70793476
chr19 6062359 6062374 NR2C2 JASPAR yes 112253604
chr19 6062374 6062394 RREB1 JASPAR yes 70793477
chr19 6062374 6062394 RREB1 JASPAR yes 112253605
chr19 6062420 6062431 ESRRA JASPAR yes 70793478
chr19 6062420 6062431 ESRRB JASPAR yes 70793479
chr19 6062420 6062431 ESRRA JASPAR yes 112253606
chr19 6062420 6062431 ESRRB JASPAR yes 112253607
chr19 6062422 6062430 NR4A2 JASPAR yes 70793480
chr19 6062422 6062430 NR4A2 JASPAR yes 112253608
chr19 6062424 6062428 ESR1 TRANSFAC yes 70793481
chr19 6062424 6062428 ESR1 TRANSFAC yes 112253609
chr19 6062428 6062434 SOX10 JASPAR yes 70793482
chr19 6062428 6062434 SOX10 JASPAR yes 112253610
chr19 6062430 6062443 ELF1 JASPAR yes 70793483
chr19 6062430 6062443 ELF1 JASPAR yes 112253611
chr19 6062431 6062444 ELF3 JASPAR yes 70793484
chr19 6062431 6062444 ELF3 JASPAR yes 112253612
chr19 6062433 6062443 GABPA JASPAR yes 70793485
chr19 6062433 6062443 GABPA JASPAR yes 112253613
chr19 6062433 6062444 ELK4 JASPAR yes 70793486
chr19 6062433 6062444 FLI1 JASPAR yes 70793487
chr19 6062433 6062444 ELK4 JASPAR yes 112253614
chr19 6062433 6062444 FLI1 JASPAR yes 112253615
chr19 6062445 6062455 SMAD3 JASPAR yes 70793488
chr19 6062445 6062455 SMAD3 JASPAR yes 112253616
chr19 6062478 6062489 NFE2L2 JASPAR yes 70793489
chr19 6062478 6062489 NFE2L2 JASPAR yes 112253617
chr19 6062496 6062509 ELF1 JASPAR yes 70793490
chr19 6062496 6062509 ELF1 JASPAR yes 112253618
chr19 6062499 6062505 PEA3 TRANSFAC yes 70793491
chr19 6062499 6062505 PEA3 TRANSFAC yes 112253619
chr19 6062504 6062514 MAX JASPAR yes 70793492
chr19 6062504 6062514 MAX JASPAR yes 112253620
chr19 6062505 6062515 CLOCK JASPAR yes 70793493
chr19 6062505 6062515 CLOCK JASPAR yes 112253621
chr19 6062513 6062523 HOXA13 JASPAR yes 70793494
chr19 6062513 6062523 HOXC10 JASPAR yes 70793495
chr19 6062513 6062523 HOXD11 JASPAR yes 70793496
chr19 6062513 6062523 HOXD13 JASPAR yes 70793497
chr19 6062513 6062523 HOXA13 JASPAR yes 112253622
chr19 6062513 6062523 HOXC10 JASPAR yes 112253623
chr19 6062513 6062523 HOXD11 JASPAR yes 112253624
chr19 6062513 6062523 HOXD13 JASPAR yes 112253625
chr19 6062513 6062524 HOXA10 JASPAR yes 70793498
chr19 6062513 6062524 HOXC11 JASPAR yes 70793499
chr19 6062513 6062524 HOXC12 JASPAR yes 70793500
chr19 6062513 6062524 HOXD12 JASPAR yes 70793501
chr19 6062513 6062524 HOXA10 JASPAR yes 112253626
chr19 6062513 6062524 HOXC11 JASPAR yes 112253627
chr19 6062513 6062524 HOXC12 JASPAR yes 112253628
chr19 6062513 6062524 HOXD12 JASPAR yes 112253629
chr19 6062514 6062523 CDX1 JASPAR yes 70793502
chr19 6062514 6062523 CDX1 JASPAR yes 112253630
chr19 6062514 6062525 CDX2 JASPAR yes 70793503
chr19 6062514 6062525 CDX2 JASPAR yes 112253631
chr19 6062562 6062568 ETS1 JASPAR yes 70793504
chr19 6062562 6062568 SPI1 JASPAR yes 70793505
chr19 6062562 6062568 ETS1 JASPAR yes 112253632
chr19 6062562 6062568 SPI1 JASPAR yes 112253633
chr19 6062562 6062572 ELK1 JASPAR yes 70793506
chr19 6062562 6062572 ELK1 JASPAR yes 112253634
chr19 6062581 6062585 TEAD2 TRANSFAC yes 70793507
chr19 6062581 6062585 TEAD2 TRANSFAC yes 112253635
chr19 6062581 6062586 TBP TRANSFAC yes 70793508
chr19 6062581 6062586 TBP TRANSFAC yes 112253636
chr19 6062581 6062587 TMF TRANSFAC yes 70793509
chr19 6062581 6062587 TMF TRANSFAC yes 112253637
chr19 6062592 6062598 MZF1 JASPAR yes 70793510
chr19 6062592 6062598 MZF1 JASPAR yes 112253638
chr19 6062596 6062608 INSM1 JASPAR yes 70793511
chr19 6062596 6062608 INSM1 JASPAR yes 112253639
chr19 6062604 6062610 NFIC JASPAR yes 70793512
chr19 6062604 6062610 NFIC JASPAR yes 112253640
chr19 6062623 6062626 MYB TRANSFAC yes 70793513
chr19 6062623 6062626 MYB TRANSFAC yes 112253641
chr19 6062634 6062652 IRF2 JASPAR yes 70793514
chr19 6062634 6062652 IRF2 JASPAR yes 112253642
chr19 6062639 6062653 IRF7 JASPAR yes 70793515
chr19 6062639 6062653 IRF7 JASPAR yes 112253643
chr19 6062650 6062665 HSF1 JASPAR yes 70793516
chr19 6062650 6062665 HSF1 JASPAR yes 112253644
chr19 6062651 6062664 HSF1 JASPAR yes 70793517
chr19 6062651 6062664 HSF2 JASPAR yes 70793518
chr19 6062651 6062664 HSF4 JASPAR yes 70793519
chr19 6062651 6062664 HSF1 JASPAR yes 112253645
chr19 6062651 6062664 HSF2 JASPAR yes 112253646
chr19 6062651 6062664 HSF4 JASPAR yes 112253647
chr19 6062656 6062669 HSF2 JASPAR yes 70793520
chr19 6062656 6062669 HSF2 JASPAR yes 112253648
chr19 6062684 6062688 NFE TRANSFAC yes 70793521
chr19 6062684 6062688 NFE TRANSFAC yes 112253649
chr19 6062693 6062704 DMRT3 JASPAR yes 70793522
chr19 6062693 6062704 DMRT3 JASPAR yes 112253650
chr19 6062703 6062718 ZIC3 JASPAR yes 70793523
chr19 6062703 6062718 ZIC4 JASPAR yes 70793524
chr19 6062703 6062718 ZIC3 JASPAR yes 112253651
chr19 6062703 6062718 ZIC4 JASPAR yes 112253652
chr19 6062709 6062714 TFAP2A TRANSFAC yes 70793525
chr19 6062709 6062714 TFAP2A TRANSFAC yes 112253653
chr19 6062709 6062715 MZF1 JASPAR yes 70793526
chr19 6062709 6062715 MZF1 JASPAR yes 112253654
chr19 6062734 6062749 HNF4A JASPAR yes 70793527
chr19 6062734 6062749 HNF4A JASPAR yes 112253655
chr19 6062745 6062749 YY1 TRANSFAC yes 70793528
chr19 6062745 6062749 YY1 TRANSFAC yes 112253656
SNP sites on vista28413[chr19:6062045-6062746]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 6062190 rs536721001 C A
FOXP1 HNF1A IRF1
5412230
chr19 6062195 rs556641542 C A
FOXP1 IRF1 SRY
5412231
chr19 6062221 rs180819043 C T
IRF1 POLR2A RREB1 RUNX2 STAT1
5412232
chr19 6062226 rs185752477 C T
IRF1 POLR2A RREB1 STAT1
5412233
chr19 6062231 rs573037091 C T
POLR2A
5412234
chr19 6062248 rs73549940 C A
POLR2A
5412235
chr19 6062275 rs683305 T C
POLR2A
5412236
chr19 6062297 rs371606897 C T
POLR2A SP1
5412237
chr19 6062304 rs549578587 G T
POLR2A THAP1
5412238
chr19 6062323 rs527720208 G A,T
GLIS1 GLIS3 POLR2A
5412239
chr19 6062533 rs118134361 C T
POLR2A
5412240
chr19 6062728 rs79554965 G A
POLR2A
5412241
Genes possibly regulated by vista28413[chr19:6062045-6062746]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 5916150 5978153 - RANBP3 ENSG00000031823.10 5978153 0.53 1.0 16878 16108
chr19 6135258 6193112 + ACSBG2 ENSG00000130377.9 6135258 0.93 1.0 16880 27488
Expression level of Genes
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miRNAs possibly regulated by vista28413[chr19:6062045-6062746]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results