EnhancerDB
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  3. vista28419[chr19:6087956-6088249]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28419[chr19:6087956-6088249]
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Tissue distribution of vista28419
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Transcription factor that possibly regulate vista28419[chr19:6087956-6088249]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 6087877 6088186 RUNX3 UCSC Txn Factor no Conserved 108377024
chr19 6087884 6088231 EBF1 UCSC Txn Factor no Conserved 108377030
chr19 6087953 6087961 HOXA5 JASPAR yes 70793813
chr19 6087953 6087961 HOXA5 JASPAR yes 112255396
chr19 6087954 6087964 EMX1 JASPAR yes 70793814
chr19 6087954 6087964 EMX2 JASPAR yes 70793815
chr19 6087954 6087964 GBX2 JASPAR yes 70793816
chr19 6087954 6087964 GSX1 JASPAR yes 70793817
chr19 6087954 6087964 GSX2 JASPAR yes 70793818
chr19 6087954 6087964 HOXB2 JASPAR yes 70793819
chr19 6087954 6087964 HOXB3 JASPAR yes 70793820
chr19 6087954 6087964 LHX6 JASPAR yes 70793821
chr19 6087954 6087964 MEOX1 JASPAR yes 70793822
chr19 6087954 6087964 MEOX2 JASPAR yes 70793823
chr19 6087954 6087964 MNX1 JASPAR yes 70793824
chr19 6087954 6087964 POU6F1 JASPAR yes 70793825
chr19 6087954 6087964 RAX JASPAR yes 70793826
chr19 6087954 6087964 EMX1 JASPAR yes 112255397
chr19 6087954 6087964 EMX2 JASPAR yes 112255398
chr19 6087954 6087964 GBX2 JASPAR yes 112255399
chr19 6087954 6087964 GSX1 JASPAR yes 112255400
chr19 6087954 6087964 GSX2 JASPAR yes 112255401
chr19 6087954 6087964 HOXB2 JASPAR yes 112255402
chr19 6087954 6087964 HOXB3 JASPAR yes 112255403
chr19 6087954 6087964 LHX6 JASPAR yes 112255404
chr19 6087954 6087964 MEOX1 JASPAR yes 112255405
chr19 6087954 6087964 MEOX2 JASPAR yes 112255406
chr19 6087954 6087964 MNX1 JASPAR yes 112255407
chr19 6087954 6087964 POU6F1 JASPAR yes 112255408
chr19 6087954 6087964 RAX JASPAR yes 112255409
chr19 6087955 6087963 LMX1A JASPAR yes 70793827
chr19 6087955 6087963 LMX1B JASPAR yes 70793828
chr19 6087955 6087963 NKX6-1 JASPAR yes 70793829
chr19 6087955 6087963 NKX6-2 JASPAR yes 70793830
chr19 6087955 6087963 PDX1 JASPAR yes 70793831
chr19 6087955 6087963 VAX1 JASPAR yes 70793832
chr19 6087955 6087963 VAX2 JASPAR yes 70793833
chr19 6087955 6087963 VSX1 JASPAR yes 70793834
chr19 6087955 6087963 LMX1A JASPAR yes 112255410
chr19 6087955 6087963 LMX1B JASPAR yes 112255411
chr19 6087955 6087963 NKX6-1 JASPAR yes 112255412
chr19 6087955 6087963 NKX6-2 JASPAR yes 112255413
chr19 6087955 6087963 PDX1 JASPAR yes 112255414
chr19 6087955 6087963 VAX1 JASPAR yes 112255415
chr19 6087955 6087963 VAX2 JASPAR yes 112255416
chr19 6087955 6087963 VSX1 JASPAR yes 112255417
chr19 6087956 6087966 PAX3 JASPAR yes 70793835
chr19 6087956 6087966 PAX7 JASPAR yes 70793836
chr19 6087956 6087966 PAX3 JASPAR yes 112255418
chr19 6087956 6087966 PAX7 JASPAR yes 112255419
chr19 6087956 6087967 PROP1 JASPAR yes 70793837
chr19 6087956 6087967 PROP1 JASPAR yes 112255420
chr19 6088003 6088018 HSF1 JASPAR yes 70793838
chr19 6088003 6088018 HSF1 JASPAR yes 112255421
chr19 6088018 6088021 MYB TRANSFAC yes 70793839
chr19 6088018 6088021 MYB TRANSFAC yes 112255422
chr19 6088025 6088032 ETS1 TRANSFAC yes 70793840
chr19 6088025 6088032 ETS1 TRANSFAC yes 112255423
chr19 6088029 6088044 RUNX2 JASPAR yes 70793841
chr19 6088029 6088044 RUNX2 JASPAR yes 112255424
chr19 6088039 6088050 EBF1 JASPAR yes 70793842
chr19 6088039 6088050 EBF1 JASPAR yes 112255425
chr19 6088068 6088082 JUN JASPAR yes 70793843
chr19 6088068 6088082 JUN JASPAR yes 112255426
chr19 6088071 6088082 FOSL2 JASPAR yes 70793844
chr19 6088071 6088082 JUNB JASPAR yes 70793845
chr19 6088071 6088082 FOSL2 JASPAR yes 112255427
chr19 6088071 6088082 JUNB JASPAR yes 112255428
chr19 6088072 6088083 FOS JASPAR yes 70793846
chr19 6088072 6088083 FOSL1 JASPAR yes 70793847
chr19 6088072 6088083 JUND JASPAR yes 70793848
chr19 6088072 6088083 FOS JASPAR yes 112255429
chr19 6088072 6088083 FOSL1 JASPAR yes 112255430
chr19 6088072 6088083 JUND JASPAR yes 112255431
chr19 6088074 6088081 JUN TRANSFAC yes 70793849
chr19 6088074 6088081 JUN TRANSFAC yes 112255432
chr19 6088085 6088100 LEF1 JASPAR yes 70793850
chr19 6088085 6088100 LEF1 JASPAR yes 112255433
chr19 6088086 6088107 IRF1 JASPAR yes 70793851
chr19 6088086 6088107 IRF1 JASPAR yes 112255434
chr19 6088090 6088096 SOX10 JASPAR yes 70793852
chr19 6088090 6088096 SOX10 JASPAR yes 112255435
chr19 6088090 6088104 SPI1 JASPAR yes 70793853
chr19 6088090 6088104 SPIC JASPAR yes 70793854
chr19 6088090 6088104 SPI1 JASPAR yes 112255436
chr19 6088090 6088104 SPIC JASPAR yes 112255437
chr19 6088091 6088104 ELF1 JASPAR yes 70793855
chr19 6088091 6088104 ELF1 JASPAR yes 112255438
chr19 6088093 6088104 ELF5 JASPAR yes 70793856
chr19 6088093 6088104 ELF5 JASPAR yes 112255439
chr19 6088094 6088101 SPIB JASPAR yes 70793857
chr19 6088094 6088101 SPIB JASPAR yes 112255440
chr19 6088094 6088105 FLI1 JASPAR yes 70793858
chr19 6088094 6088105 FLI1 JASPAR yes 112255441
chr19 6088105 6088117 INSM1 JASPAR yes 70793859
chr19 6088105 6088117 INSM1 JASPAR yes 112255442
chr19 6088105 6088119 NR2F1 JASPAR yes 70793860
chr19 6088105 6088119 RXRB JASPAR yes 70793861
chr19 6088105 6088119 RXRG JASPAR yes 70793862
chr19 6088105 6088119 NR2F1 JASPAR yes 112255443
chr19 6088105 6088119 RXRB JASPAR yes 112255444
chr19 6088105 6088119 RXRG JASPAR yes 112255445
chr19 6088154 6088157 MYB TRANSFAC yes 70793863
chr19 6088154 6088157 MYB TRANSFAC yes 112255446
chr19 6088160 6088180 TP63 JASPAR yes 70793864
chr19 6088160 6088180 TP63 JASPAR yes 112255447
chr19 6088181 6088187 SOX10 JASPAR yes 70793865
chr19 6088181 6088187 SOX10 JASPAR yes 112255448
chr19 6088184 6088196 TEAD1 JASPAR yes 70793866
chr19 6088184 6088196 TEAD1 JASPAR yes 112255449
chr19 6088210 6088214 LFA1 TRANSFAC yes 70793867
chr19 6088210 6088214 LFA1 TRANSFAC yes 112255450
chr19 6088216 6088226 MSC JASPAR yes 70793868
chr19 6088216 6088226 MSC JASPAR yes 112255451
chr19 6088216 6088237 IRF1 JASPAR yes 70793869
chr19 6088216 6088237 IRF1 JASPAR yes 112255452
chr19 6088219 6088240 IRF1 JASPAR yes 70793870
chr19 6088219 6088240 IRF1 JASPAR yes 112255453
chr19 6088220 6088241 IRF1 JASPAR yes 70793871
chr19 6088220 6088241 IRF1 JASPAR yes 112255454
chr19 6088221 6088236 FOXP1 JASPAR yes 70793872
chr19 6088221 6088236 FOXP1 JASPAR yes 112255455
chr19 6088221 6088242 IRF1 JASPAR yes 70793873
chr19 6088221 6088242 IRF1 JASPAR yes 112255456
chr19 6088222 6088237 FOXP1 JASPAR yes 70793874
chr19 6088222 6088237 FOXP1 JASPAR yes 112255457
chr19 6088222 6088243 IRF1 JASPAR yes 70793875
chr19 6088222 6088243 IRF1 JASPAR yes 112255458
chr19 6088223 6088238 FOXP1 JASPAR yes 70793876
chr19 6088223 6088238 FOXP1 JASPAR yes 112255459
chr19 6088223 6088244 IRF1 JASPAR yes 70793877
chr19 6088223 6088244 IRF1 JASPAR yes 112255460
chr19 6088224 6088239 FOXP1 JASPAR yes 70793878
chr19 6088224 6088239 FOXP1 JASPAR yes 112255461
chr19 6088224 6088245 IRF1 JASPAR yes 70793879
chr19 6088224 6088245 IRF1 JASPAR yes 112255462
chr19 6088225 6088240 FOXP1 JASPAR yes 70793880
chr19 6088225 6088240 FOXP1 JASPAR yes 112255463
chr19 6088225 6088246 IRF1 JASPAR yes 70793881
chr19 6088225 6088246 IRF1 JASPAR yes 112255464
chr19 6088226 6088241 FOXP1 JASPAR yes 70793882
chr19 6088226 6088241 FOXP1 JASPAR yes 112255465
chr19 6088226 6088247 IRF1 JASPAR yes 70793883
chr19 6088226 6088247 IRF1 JASPAR yes 112255466
chr19 6088227 6088242 FOXP1 JASPAR yes 70793884
chr19 6088227 6088242 FOXP1 JASPAR yes 112255467
chr19 6088227 6088248 IRF1 JASPAR yes 70793885
chr19 6088227 6088248 IRF1 JASPAR yes 112255468
chr19 6088228 6088243 FOXP1 JASPAR yes 70793886
chr19 6088228 6088243 FOXP1 JASPAR yes 112255469
chr19 6088229 6088244 FOXP1 JASPAR yes 70793887
chr19 6088229 6088244 FOXP1 JASPAR yes 112255470
chr19 6088230 6088245 FOXP1 JASPAR yes 70793888
chr19 6088230 6088245 FOXP1 JASPAR yes 112255471
chr19 6088231 6088246 FOXP1 JASPAR yes 70793889
chr19 6088231 6088246 FOXP1 JASPAR yes 112255472
chr19 6088232 6088247 FOXP1 JASPAR yes 70793890
chr19 6088232 6088247 FOXP1 JASPAR yes 112255473
chr19 6088233 6088248 FOXP1 JASPAR yes 70793891
chr19 6088233 6088248 FOXP1 JASPAR yes 112255474
chr19 6088234 6088249 FOXP1 JASPAR yes 70793892
chr19 6088234 6088249 FOXP1 JASPAR yes 112255475
chr19 6088235 6088250 FOXP1 JASPAR yes 70793893
chr19 6088235 6088250 FOXP1 JASPAR yes 112255476
chr19 6088249 6088267 IRF2 JASPAR yes 70793894
chr19 6088249 6088267 IRF2 JASPAR yes 112255477
SNP sites on vista28419[chr19:6087956-6088249]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 6088002 rs10406048 C T
EBF1 RUNX3
5412382
chr19 6088005 rs78148525 T G
EBF1 HSF1 RUNX3
5412383
chr19 6088024 rs142199900 C T
EBF1 RUNX3
5412384
chr19 6088025 rs570372167 G T
EBF1 ETS1 RUNX3
5412385
chr19 6088080 rs533009565 C G
EBF1 FOS FOSL1 FOSL2 JUN JUNB JUND RUNX3
5412386
chr19 6088087 rs557318 G C
EBF1 IRF1 LEF1 RUNX3
5412387
Genes possibly regulated by vista28419[chr19:6087956-6088249]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 6135258 6193112 + ACSBG2 ENSG00000130377.9 6135258 0.93 1.0 16880 52991
Expression level of Genes
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miRNAs possibly regulated by vista28419[chr19:6087956-6088249]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results