EnhancerDB
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  3. vista28422[chr19:6108691-6108922]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28422[chr19:6108691-6108922]
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Tissue distribution of vista28422
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Transcription factor that possibly regulate vista28422[chr19:6108691-6108922]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 6108708 6108729 ZNF263 JASPAR yes 70794000
chr19 6108708 6108729 ZNF263 JASPAR yes 112258508
chr19 6108709 6108724 TFAP2C JASPAR yes 70794001
chr19 6108709 6108724 TFAP2C JASPAR yes 112258509
chr19 6108710 6108721 TFAP2A JASPAR yes 70794002
chr19 6108710 6108721 TFAP2B JASPAR yes 70794003
chr19 6108710 6108721 TFAP2C JASPAR yes 70794004
chr19 6108710 6108721 TFAP2A JASPAR yes 112258510
chr19 6108710 6108721 TFAP2B JASPAR yes 112258511
chr19 6108710 6108721 TFAP2C JASPAR yes 112258512
chr19 6108710 6108722 TFAP2A JASPAR yes 70794005
chr19 6108710 6108722 TFAP2B JASPAR yes 70794006
chr19 6108710 6108722 TFAP2A JASPAR yes 112258513
chr19 6108710 6108722 TFAP2B JASPAR yes 112258514
chr19 6108711 6108720 TFAP2A JASPAR yes 70794007
chr19 6108711 6108720 TFAP2A JASPAR yes 112258515
chr19 6108713 6108723 ZNF740 JASPAR yes 70794008
chr19 6108713 6108723 ZNF740 JASPAR yes 112258516
chr19 6108716 6108731 NR2C2 JASPAR yes 70794009
chr19 6108716 6108731 NR2C2 JASPAR yes 112258517
chr19 6108717 6108724 SP1 TRANSFAC yes 70794010
chr19 6108717 6108724 SP1 TRANSFAC yes 112258518
chr19 6108717 6108727 SP1 JASPAR yes 70794011
chr19 6108717 6108727 SP1 JASPAR yes 112258519
chr19 6108718 6108726 SP1 TRANSFAC yes 70794012
chr19 6108718 6108726 SP1 TRANSFAC yes 112258520
chr19 6108719 6108724 SP1 TRANSFAC yes 70794013
chr19 6108719 6108724 SP1 TRANSFAC yes 112258521
chr19 6108720 6108725 SP1 TRANSFAC yes 70794014
chr19 6108720 6108725 SP1 TRANSFAC yes 112258522
chr19 6108720 6108726 SP1 TRANSFAC yes 70794015
chr19 6108720 6108726 SP1 TRANSFAC yes 112258523
chr19 6108724 6108744 ESR1 JASPAR yes 70794016
chr19 6108724 6108744 ESR1 JASPAR yes 112258524
chr19 6108729 6108744 ESR2 JASPAR yes 70794017
chr19 6108729 6108744 ESR2 JASPAR yes 112258525
chr19 6108729 6108749 ESR1 JASPAR yes 70794018
chr19 6108729 6108749 ESR1 JASPAR yes 112258526
chr19 6108745 6108749 H4TF2 TRANSFAC yes 70794019
chr19 6108745 6108749 H4TF2 TRANSFAC yes 112258527
chr19 6108752 6108764 YY1 JASPAR yes 70794020
chr19 6108752 6108764 YY1 JASPAR yes 112258528
chr19 6108762 6108777 NR2C2 JASPAR yes 70794021
chr19 6108762 6108777 NR2C2 JASPAR yes 112258529
chr19 6108765 6108786 ZNF263 JASPAR yes 70794022
chr19 6108765 6108786 ZNF263 JASPAR yes 112258530
chr19 6108767 6108777 MZF1 JASPAR yes 70794023
chr19 6108767 6108777 MZF1 JASPAR yes 112258531
chr19 6108770 6108776 SP1 TRANSFAC yes 70794024
chr19 6108770 6108776 SP1 TRANSFAC yes 112258532
chr19 6108770 6108780 SP1 JASPAR yes 70794025
chr19 6108770 6108780 SP1 JASPAR yes 112258533
chr19 6108774 6108780 MZF1 JASPAR yes 70794026
chr19 6108774 6108780 MZF1 JASPAR yes 112258534
chr19 6108798 6108813 MEF2C JASPAR yes 70794027
chr19 6108798 6108813 MEF2C JASPAR yes 112258535
chr19 6108803 6108817 SPI1 JASPAR yes 70794028
chr19 6108803 6108817 SPIC JASPAR yes 70794029
chr19 6108803 6108817 SPI1 JASPAR yes 112258536
chr19 6108803 6108817 SPIC JASPAR yes 112258537
chr19 6108855 6108860 SP1 TRANSFAC yes 70794030
chr19 6108855 6108860 SP1 TRANSFAC yes 112258538
chr19 6108855 6108869 PLAG1 JASPAR yes 70794031
chr19 6108855 6108869 PLAG1 JASPAR yes 112258539
chr19 6108857 6108869 TFAP2A JASPAR yes 70794032
chr19 6108857 6108869 TFAP2A JASPAR yes 112258540
chr19 6108857 6108870 TFAP2A JASPAR yes 70794033
chr19 6108857 6108870 TFAP2B JASPAR yes 70794034
chr19 6108857 6108870 TFAP2C JASPAR yes 70794035
chr19 6108857 6108870 TFAP2A JASPAR yes 112258541
chr19 6108857 6108870 TFAP2B JASPAR yes 112258542
chr19 6108857 6108870 TFAP2C JASPAR yes 112258543
chr19 6108865 6108870 SP1 TRANSFAC yes 70794036
chr19 6108865 6108870 SP1 TRANSFAC yes 112258544
chr19 6108869 6108884 MEF2A JASPAR yes 70794037
chr19 6108869 6108884 MEF2A JASPAR yes 112258545
chr19 6108891 6108899 FEV JASPAR yes 70794038
chr19 6108891 6108899 FEV JASPAR yes 112258546
chr19 6108891 6108902 NFKB1 JASPAR yes 70794039
chr19 6108891 6108902 NFKB1 JASPAR yes 112258547
chr19 6108892 6108902 RELA JASPAR yes 70794040
chr19 6108892 6108902 RELA JASPAR yes 112258548
chr19 6108893 6108903 RELA JASPAR yes 70794041
chr19 6108893 6108903 RELA JASPAR yes 112258549
chr19 6108920 6108941 IRF1 JASPAR yes 70794042
chr19 6108920 6108941 IRF1 JASPAR yes 112258550
SNP sites on vista28422[chr19:6108691-6108922]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 6108718 rs113206366 G A,C,T
NR2C2 SP1 TFAP2A TFAP2B TFAP2C ZNF263 ZNF740
5412645
chr19 6108834 rs547194265 C G no 5412646
chr19 6108847 rs112598845 C T no 5412647
chr19 6108848 rs533273616 G C no 5412648
chr19 6108920 rs116142891 G A
IRF1
5412649
Genes possibly regulated by vista28422[chr19:6108691-6108922]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 5993175 6199583 - RFX2 ENSG00000087903.8 6199583 0.76 1.0 16879 9339
chr19 6135258 6193112 + ACSBG2 ENSG00000130377.9 6135258 0.93 1.0 16880 73664
Expression level of Genes
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miRNAs possibly regulated by vista28422[chr19:6108691-6108922]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results