EnhancerDB
  1. Home
  2. Enhancers
  3. vista28423[chr19:6108978-6109271]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28423[chr19:6108978-6109271]
Back to top
Tissue distribution of vista28423
Back to top
Transcription factor that possibly regulate vista28423[chr19:6108978-6109271]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 6108945 6109185 EGR1 UCSC Txn Factor no Conserved 108377362
chr19 6108981 6109002 ZNF263 JASPAR yes 70794043
chr19 6108981 6109002 ZNF263 JASPAR yes 112258558
chr19 6108983 6109004 IRF1 JASPAR yes 70794044
chr19 6108983 6109004 IRF1 JASPAR yes 112258559
chr19 6108984 6108990 PEA3 TRANSFAC yes 70794045
chr19 6108984 6108990 PEA3 TRANSFAC yes 112258560
chr19 6108984 6109005 ZNF263 JASPAR yes 70794046
chr19 6108984 6109005 ZNF263 JASPAR yes 112258561
chr19 6108986 6109000 IRF7 JASPAR yes 70794047
chr19 6108986 6109000 IRF7 JASPAR yes 112258562
chr19 6108987 6109001 STAT1 JASPAR yes 70794048
chr19 6108987 6109001 STAT1 JASPAR yes 112258563
chr19 6108987 6109002 PRDM1 JASPAR yes 70794049
chr19 6108987 6109002 STAT2 JASPAR yes 70794050
chr19 6108987 6109002 PRDM1 JASPAR yes 112258564
chr19 6108987 6109002 STAT2 JASPAR yes 112258565
chr19 6108987 6109005 IRF2 JASPAR yes 70794051
chr19 6108987 6109005 IRF2 JASPAR yes 112258566
chr19 6108997 6109003 HiNF-A TRANSFAC yes 70794052
chr19 6108997 6109003 HiNF-A TRANSFAC yes 112258567
chr19 6109006 6109010 YY1 TRANSFAC yes 70794053
chr19 6109006 6109010 YY1 TRANSFAC yes 112258568
chr19 6109007 6109027 RREB1 JASPAR yes 70794054
chr19 6109007 6109027 RREB1 JASPAR yes 112258569
chr19 6109012 6109020 MGA JASPAR yes 70794055
chr19 6109012 6109020 TBX15 JASPAR yes 70794056
chr19 6109012 6109020 TBX1 JASPAR yes 70794057
chr19 6109012 6109020 TBX4 JASPAR yes 70794058
chr19 6109012 6109020 TBX5 JASPAR yes 70794059
chr19 6109012 6109020 MGA JASPAR yes 112258570
chr19 6109012 6109020 TBX15 JASPAR yes 112258571
chr19 6109012 6109020 TBX1 JASPAR yes 112258572
chr19 6109012 6109020 TBX4 JASPAR yes 112258573
chr19 6109012 6109020 TBX5 JASPAR yes 112258574
chr19 6109021 6109041 RREB1 JASPAR yes 70794060
chr19 6109021 6109041 RREB1 JASPAR yes 112258575
chr19 6109025 6109045 RREB1 JASPAR yes 70794061
chr19 6109025 6109045 RREB1 JASPAR yes 112258576
chr19 6109029 6109049 RREB1 JASPAR yes 70794062
chr19 6109029 6109049 RREB1 JASPAR yes 112258577
chr19 6109060 6109080 RREB1 JASPAR yes 70794063
chr19 6109060 6109080 RREB1 JASPAR yes 112258578
chr19 6109065 6109070 SP1 TRANSFAC yes 70794064
chr19 6109065 6109070 SP1 TRANSFAC yes 112258579
chr19 6109068 6109073 SP1 TRANSFAC yes 70794065
chr19 6109068 6109073 SP1 TRANSFAC yes 112258580
chr19 6109070 6109090 RREB1 JASPAR yes 70794066
chr19 6109070 6109090 RREB1 JASPAR yes 112258581
chr19 6109072 6109077 SP1 TRANSFAC yes 70794067
chr19 6109072 6109077 SP1 TRANSFAC yes 112258582
chr19 6109074 6109089 NR2C2 JASPAR yes 70794068
chr19 6109074 6109089 NR2C2 JASPAR yes 112258583
chr19 6109075 6109085 SP1 JASPAR yes 70794069
chr19 6109075 6109085 SP1 JASPAR yes 112258584
chr19 6109075 6109089 PLAG1 JASPAR yes 70794070
chr19 6109075 6109089 PLAG1 JASPAR yes 112258585
chr19 6109076 6109086 SP1 JASPAR yes 70794071
chr19 6109076 6109086 SP1 JASPAR yes 112258586
chr19 6109077 6109081 LFA1 TRANSFAC yes 70794072
chr19 6109077 6109081 LFA1 TRANSFAC yes 112258587
chr19 6109077 6109089 INSM1 JASPAR yes 70794073
chr19 6109077 6109089 INSM1 JASPAR yes 112258588
chr19 6109093 6109104 FOXH1 JASPAR yes 70794074
chr19 6109093 6109104 FOXH1 JASPAR yes 112258589
chr19 6109097 6109103 ZNF354C JASPAR yes 70794075
chr19 6109097 6109103 ZNF354C JASPAR yes 112258590
chr19 6109102 6109122 RREB1 JASPAR yes 70794076
chr19 6109102 6109122 RREB1 JASPAR yes 112258591
chr19 6109103 6109109 HiNF-A TRANSFAC yes 70794077
chr19 6109103 6109109 HiNF-A TRANSFAC yes 112258592
chr19 6109138 6109153 TFAP2C JASPAR yes 70794078
chr19 6109138 6109153 TFAP2C JASPAR yes 112258593
chr19 6109148 6109162 STAT1 JASPAR yes 70794079
chr19 6109148 6109162 STAT1 JASPAR yes 112258594
chr19 6109162 6109165 MYB TRANSFAC yes 70794080
chr19 6109162 6109165 MYB TRANSFAC yes 112258595
chr19 6109164 6109178 ONECUT2 JASPAR yes 70794081
chr19 6109164 6109178 ONECUT3 JASPAR yes 70794082
chr19 6109164 6109178 ONECUT2 JASPAR yes 112258596
chr19 6109164 6109178 ONECUT3 JASPAR yes 112258597
chr19 6109164 6109179 FOXP1 JASPAR yes 70794083
chr19 6109164 6109179 FOXP1 JASPAR yes 112258598
chr19 6109165 6109176 FOXA1 JASPAR yes 70794084
chr19 6109165 6109176 FOXA1 JASPAR yes 112258599
chr19 6109165 6109180 FOXA1 JASPAR yes 70794085
chr19 6109165 6109180 FOXA1 JASPAR yes 112258600
chr19 6109166 6109177 FOXB1 JASPAR yes 70794086
chr19 6109166 6109177 FOXC1 JASPAR yes 70794087
chr19 6109166 6109177 FOXB1 JASPAR yes 112258601
chr19 6109166 6109177 FOXC1 JASPAR yes 112258602
chr19 6109166 6109178 FOXC2 JASPAR yes 70794088
chr19 6109166 6109178 FOXC2 JASPAR yes 112258603
chr19 6109167 6109179 FOXI1 JASPAR yes 70794089
chr19 6109167 6109179 FOXI1 JASPAR yes 112258604
chr19 6109169 6109190 IRF1 JASPAR yes 70794090
chr19 6109169 6109190 IRF1 JASPAR yes 112258605
chr19 6109170 6109181 PROP1 JASPAR yes 70794091
chr19 6109170 6109181 PROP1 JASPAR yes 112258606
chr19 6109172 6109186 IRF7 JASPAR yes 70794092
chr19 6109172 6109186 IRF7 JASPAR yes 112258607
chr19 6109175 6109190 FOXP1 JASPAR yes 70794093
chr19 6109175 6109190 FOXP1 JASPAR yes 112258608
chr19 6109175 6109196 IRF1 JASPAR yes 70794094
chr19 6109175 6109196 IRF1 JASPAR yes 112258609
chr19 6109177 6109182 MYB TRANSFAC yes 70794095
chr19 6109177 6109182 MYB TRANSFAC yes 112258610
chr19 6109179 6109194 FOXP1 JASPAR yes 70794096
chr19 6109179 6109194 FOXP1 JASPAR yes 112258611
chr19 6109179 6109200 IRF1 JASPAR yes 70794097
chr19 6109179 6109200 IRF1 JASPAR yes 112258612
chr19 6109180 6109195 FOXP1 JASPAR yes 70794098
chr19 6109180 6109195 FOXP1 JASPAR yes 112258613
chr19 6109183 6109198 PRDM1 JASPAR yes 70794099
chr19 6109183 6109198 STAT2 JASPAR yes 70794100
chr19 6109183 6109198 PRDM1 JASPAR yes 112258614
chr19 6109183 6109198 STAT2 JASPAR yes 112258615
chr19 6109224 6109239 HSF1 JASPAR yes 70794101
chr19 6109224 6109239 HSF1 JASPAR yes 112258616
chr19 6109225 6109238 HSF2 JASPAR yes 70794102
chr19 6109225 6109238 HSF4 JASPAR yes 70794103
chr19 6109225 6109238 HSF2 JASPAR yes 112258617
chr19 6109225 6109238 HSF4 JASPAR yes 112258618
chr19 6109250 6109262 HINFP JASPAR yes 70794104
chr19 6109250 6109262 HINFP JASPAR yes 112258619
chr19 6109252 6109262 HINFP JASPAR yes 70794105
chr19 6109252 6109262 HINFP JASPAR yes 112258620
chr19 6109265 6109282 RARA JASPAR yes 70794106
chr19 6109265 6109282 RXRA JASPAR yes 70794107
chr19 6109265 6109282 RARA JASPAR yes 112258621
chr19 6109265 6109282 RXRA JASPAR yes 112258622
chr19 6109266 6109270 LFA1 TRANSFAC yes 70794108
chr19 6109266 6109270 LFA1 TRANSFAC yes 112258623
SNP sites on vista28423[chr19:6108978-6109271]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 6108978 rs146270759 C T
EGR1
5412650
chr19 6108984 rs568569309 G C
EGR1 IRF1 PEA3 ZNF263
5412651
chr19 6109035 rs201164288 G T
EGR1 RREB1
5412652
chr19 6109063 rs78509942 G T
EGR1 RREB1
5412653
Genes possibly regulated by vista28423[chr19:6108978-6109271]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 5993175 6199583 - RFX2 ENSG00000087903.8 6199583 0.76 1.0 16879 9688
chr19 6135258 6193112 + ACSBG2 ENSG00000130377.9 6135258 0.93 1.0 16880 74013
Expression level of Genes
Back to top
miRNAs possibly regulated by vista28423[chr19:6108978-6109271]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results