EnhancerDB
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  3. vista28429[chr19:6271729-6272422]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28429[chr19:6271729-6272422]
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Tissue distribution of vista28429
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Transcription factor that possibly regulate vista28429[chr19:6271729-6272422]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 6271728 6271739 NFIL3 JASPAR yes 70794293
chr19 6271728 6271739 NFIL3 JASPAR yes 112266445
chr19 6271748 6271768 TP63 JASPAR yes 70794294
chr19 6271748 6271768 TP63 JASPAR yes 112266446
chr19 6271767 6271785 MAFF JASPAR yes 70794295
chr19 6271767 6271785 MAFF JASPAR yes 112266447
chr19 6271768 6271776 ISL2 JASPAR yes 70794296
chr19 6271768 6271776 ISL2 JASPAR yes 112266448
chr19 6271768 6271777 NKX3-2 JASPAR yes 70794297
chr19 6271768 6271777 NKX3-2 JASPAR yes 112266449
chr19 6271769 6271780 NRL JASPAR yes 70794298
chr19 6271769 6271780 NRL JASPAR yes 112266450
chr19 6271769 6271784 MAFK JASPAR yes 70794299
chr19 6271769 6271784 MAFK JASPAR yes 112266451
chr19 6271778 6271784 GATA3 JASPAR yes 70794300
chr19 6271778 6271784 GATA3 JASPAR yes 112266452
chr19 6271786 6271799 SMAD2 JASPAR yes 70794301
chr19 6271786 6271799 SMAD2 JASPAR yes 112266453
chr19 6271802 6271812 SREBF1 JASPAR yes 70794302
chr19 6271802 6271812 SREBF1 JASPAR yes 112266454
chr19 6271835 6271840 SP1 TRANSFAC yes 70794303
chr19 6271835 6271840 SP1 TRANSFAC yes 112266455
chr19 6271877 6271891 CREB3 JASPAR yes 70794304
chr19 6271877 6271891 CREB3 JASPAR yes 112266456
chr19 6271884 6271890 YY1 JASPAR yes 70794305
chr19 6271884 6271890 YY1 JASPAR yes 112266457
chr19 6271888 6271903 RFX5 JASPAR yes 70794306
chr19 6271888 6271903 RFX5 JASPAR yes 112266458
chr19 6271892 6271906 TLX1 JASPAR yes 70794307
chr19 6271892 6271906 TLX1 JASPAR yes 112266459
chr19 6271893 6271907 TLX1 JASPAR yes 70794308
chr19 6271893 6271907 TLX1 JASPAR yes 112266460
chr19 6271900 6271913 ZBTB18 JASPAR yes 70794309
chr19 6271900 6271913 ZBTB18 JASPAR yes 112266461
chr19 6271902 6271912 ID4 JASPAR yes 70794310
chr19 6271902 6271912 TCF3 JASPAR yes 70794311
chr19 6271902 6271912 TCF4 JASPAR yes 70794312
chr19 6271902 6271912 ID4 JASPAR yes 112266462
chr19 6271902 6271912 TCF3 JASPAR yes 112266463
chr19 6271902 6271912 TCF4 JASPAR yes 112266464
chr19 6271904 6271913 ZEB1 JASPAR yes 70794313
chr19 6271904 6271913 ZEB1 JASPAR yes 112266465
chr19 6271905 6271913 TBX5 JASPAR yes 70794314
chr19 6271905 6271913 TBX5 JASPAR yes 112266466
chr19 6271913 6271931 ESR1 JASPAR yes 70794315
chr19 6271913 6271931 ESR1 JASPAR yes 112266467
chr19 6271939 6271943 NFE TRANSFAC yes 70794316
chr19 6271939 6271943 NFE TRANSFAC yes 112266468
chr19 6271950 6271956 NFIC JASPAR yes 70794317
chr19 6271950 6271956 NFIC JASPAR yes 112266469
chr19 6271954 6271958 YY1 TRANSFAC yes 70794318
chr19 6271954 6271958 YY1 TRANSFAC yes 112266470
chr19 6271974 6271984 SP1 JASPAR yes 70794319
chr19 6271974 6271984 SP1 JASPAR yes 112266471
chr19 6271975 6271981 SP1 TRANSFAC yes 70794320
chr19 6271975 6271981 SP1 TRANSFAC yes 112266472
chr19 6271981 6271986 USF2 TRANSFAC yes 70794321
chr19 6271981 6271986 USF2 TRANSFAC yes 112266473
chr19 6272011 6272022 E2F6 JASPAR yes 70794322
chr19 6272011 6272022 E2F6 JASPAR yes 112266474
chr19 6272012 6272033 ZNF263 JASPAR yes 70794323
chr19 6272012 6272033 ZNF263 JASPAR yes 112266475
chr19 6272013 6272034 ZNF263 JASPAR yes 70794324
chr19 6272013 6272034 ZNF263 JASPAR yes 112266476
chr19 6272015 6272026 E2F6 JASPAR yes 70794325
chr19 6272015 6272026 E2F6 JASPAR yes 112266477
chr19 6272016 6272037 ZNF263 JASPAR yes 70794326
chr19 6272016 6272037 ZNF263 JASPAR yes 112266478
chr19 6272023 6272033 SP1 JASPAR yes 70794327
chr19 6272023 6272033 SP1 JASPAR yes 112266479
chr19 6272029 6272044 NR2C2 JASPAR yes 70794328
chr19 6272029 6272044 NR2C2 JASPAR yes 112266480
chr19 6272044 6272049 MYC TRANSFAC yes 70794329
chr19 6272044 6272049 MYC TRANSFAC yes 112266481
chr19 6272049 6272059 BHLHE41 JASPAR yes 70794330
chr19 6272049 6272059 MLX JASPAR yes 70794331
chr19 6272049 6272059 SREBF1 JASPAR yes 70794332
chr19 6272049 6272059 SREBF2 JASPAR yes 70794333
chr19 6272049 6272059 BHLHE41 JASPAR yes 112266482
chr19 6272049 6272059 MLX JASPAR yes 112266483
chr19 6272049 6272059 SREBF1 JASPAR yes 112266484
chr19 6272049 6272059 SREBF2 JASPAR yes 112266485
chr19 6272061 6272074 TFAP2A JASPAR yes 70794334
chr19 6272061 6272074 TFAP2B JASPAR yes 70794335
chr19 6272061 6272074 TFAP2C JASPAR yes 70794336
chr19 6272061 6272074 TFAP2A JASPAR yes 112266486
chr19 6272061 6272074 TFAP2B JASPAR yes 112266487
chr19 6272061 6272074 TFAP2C JASPAR yes 112266488
chr19 6272069 6272073 LFA1 TRANSFAC yes 70794337
chr19 6272069 6272073 LFA1 TRANSFAC yes 112266489
chr19 6272082 6272086 NFE TRANSFAC yes 70794338
chr19 6272082 6272086 NFE TRANSFAC yes 112266490
chr19 6272082 6272089 GATA1 TRANSFAC yes 70794339
chr19 6272082 6272089 GATA1 TRANSFAC yes 112266491
chr19 6272089 6272099 SP1 JASPAR yes 70794340
chr19 6272089 6272099 SP1 JASPAR yes 112266492
chr19 6272095 6272101 SP1 TRANSFAC yes 70794341
chr19 6272095 6272101 SP1 TRANSFAC yes 112266493
chr19 6272097 6272102 SP1 TRANSFAC yes 70794342
chr19 6272097 6272102 SP1 TRANSFAC yes 112266494
chr19 6272099 6272110 YY2 JASPAR yes 70794343
chr19 6272099 6272110 YY2 JASPAR yes 112266495
chr19 6272100 6272112 YY1 JASPAR yes 70794344
chr19 6272100 6272112 YY1 JASPAR yes 112266496
chr19 6272141 6272146 ETS2 TRANSFAC yes 70794345
chr19 6272141 6272146 ETS2 TRANSFAC yes 112266497
chr19 6272178 6272182 YY1 TRANSFAC yes 70794346
chr19 6272178 6272182 YY1 TRANSFAC yes 112266498
chr19 6272179 6272187 FEV JASPAR yes 70794347
chr19 6272179 6272187 FEV JASPAR yes 112266499
chr19 6272204 6272218 TCF7L2 JASPAR yes 70794348
chr19 6272204 6272218 TCF7L2 JASPAR yes 112266500
chr19 6272218 6272221 MYB TRANSFAC yes 70794349
chr19 6272218 6272221 MYB TRANSFAC yes 112266501
chr19 6272221 6272235 TCF7L2 JASPAR yes 70794350
chr19 6272221 6272235 TCF7L2 JASPAR yes 112266502
chr19 6272227 6272242 HNF4G JASPAR yes 70794351
chr19 6272227 6272242 HNF4G JASPAR yes 112266503
chr19 6272228 6272242 NR2F1 JASPAR yes 70794352
chr19 6272228 6272242 NR2F1 JASPAR yes 112266504
chr19 6272228 6272243 HNF4A JASPAR yes 70794353
chr19 6272228 6272243 HNF4A JASPAR yes 112266505
chr19 6272257 6272267 BHLHE40 JASPAR yes 70794354
chr19 6272257 6272267 CLOCK JASPAR yes 70794355
chr19 6272257 6272267 HEY1 JASPAR yes 70794356
chr19 6272257 6272267 MAX JASPAR yes 70794357
chr19 6272257 6272267 MNT JASPAR yes 70794358
chr19 6272257 6272267 BHLHE40 JASPAR yes 112266506
chr19 6272257 6272267 CLOCK JASPAR yes 112266507
chr19 6272257 6272267 HEY1 JASPAR yes 112266508
chr19 6272257 6272267 MAX JASPAR yes 112266509
chr19 6272257 6272267 MNT JASPAR yes 112266510
chr19 6272259 6272264 MYC TRANSFAC yes 70794359
chr19 6272259 6272264 USF1 TRANSFAC yes 70794360
chr19 6272259 6272264 USF2 TRANSFAC yes 70794361
chr19 6272259 6272264 MYC TRANSFAC yes 112266511
chr19 6272259 6272264 USF1 TRANSFAC yes 112266512
chr19 6272259 6272264 USF2 TRANSFAC yes 112266513
chr19 6272300 6272319 REST JASPAR yes 70794362
chr19 6272300 6272319 REST JASPAR yes 112266514
chr19 6272303 6272307 NFE TRANSFAC yes 70794363
chr19 6272303 6272307 NFE TRANSFAC yes 112266515
chr19 6272311 6272316 GATA1 TRANSFAC yes 70794364
chr19 6272311 6272316 GATA1 TRANSFAC yes 112266516
chr19 6272332 6272340 FEV JASPAR yes 70794365
chr19 6272332 6272340 FEV JASPAR yes 112266517
chr19 6272337 6272350 ELF1 JASPAR yes 70794366
chr19 6272337 6272350 ELF1 JASPAR yes 112266518
chr19 6272340 6272351 FLI1 JASPAR yes 70794367
chr19 6272340 6272351 FLI1 JASPAR yes 112266519
chr19 6272342 6272360 E2F3 JASPAR yes 70794368
chr19 6272342 6272360 E2F3 JASPAR yes 112266520
chr19 6272352 6272362 TEAD1 JASPAR yes 70794369
chr19 6272352 6272362 TEAD4 JASPAR yes 70794370
chr19 6272352 6272362 TEAD1 JASPAR yes 112266521
chr19 6272352 6272362 TEAD4 JASPAR yes 112266522
chr19 6272352 6272364 TEAD1 JASPAR yes 70794371
chr19 6272352 6272364 TEAD1 JASPAR yes 112266523
chr19 6272353 6272361 TEAD3 JASPAR yes 70794372
chr19 6272353 6272361 TEAD3 JASPAR yes 112266524
chr19 6272376 6272388 INSM1 JASPAR yes 70794373
chr19 6272376 6272388 INSM1 JASPAR yes 112266525
chr19 6272405 6272409 NFE TRANSFAC yes 70794374
chr19 6272405 6272409 NFE TRANSFAC yes 112266526
chr19 6272405 6272410 GATA1 TRANSFAC yes 70794375
chr19 6272405 6272410 GATA1 TRANSFAC yes 112266527
chr19 6272405 6272411 GATA3 JASPAR yes 70794376
chr19 6272405 6272411 GATA3 JASPAR yes 112266528
SNP sites on vista28429[chr19:6271729-6272422]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 6271787 rs114726199 G A
SMAD2
5413876
chr19 6271833 rs550118971 G C no 5413877
chr19 6271951 rs538143106 T C
NFIC
5413878
chr19 6271965 rs60158934 C G,T no 5413879
chr19 6271975 rs141435134 A G
SP1
5413880
chr19 6271999 rs114002559 C T no 5413881
chr19 6272104 rs185854142 G A
YY1 YY2
5413882
chr19 6272159 rs113020498 G A no 5413883
chr19 6272173 rs546354365 C T no 5413884
chr19 6272237 rs111788121 A G
HNF4A HNF4G NR2F1
5413885
chr19 6272350 rs74611486 G A
E2F3 ELF1 FLI1
5413886
chr19 6272407 rs10407907 T C
GATA1 GATA3 NFE
5413887
Genes possibly regulated by vista28429[chr19:6271729-6272422]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 5993175 6199583 - RFX2 ENSG00000087903.8 6199583 0.76 1.0 16879 27854
chr19 6212966 6279959 - MLLT1 ENSG00000130382.7 6279959 0.68 1.0 16881 92463
chr19 6306153 6333640 - ACER1 ENSG00000167769.4 6333640 0.95 1.0 16882 38782
chr19 6361463 6368919 + CLPP ENSG00000125656.4 6361463 0.61 1.0 16883 10959
Expression level of Genes
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miRNAs possibly regulated by vista28429[chr19:6271729-6272422]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results