EnhancerDB
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  3. vista28430[chr19:6273754-6274259]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28430[chr19:6273754-6274259]
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Tissue distribution of vista28430
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Transcription factor that possibly regulate vista28430[chr19:6273754-6274259]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 6273573 6274343 E2F1 UCSC Txn Factor no Conserved 108377667
chr19 6273745 6274069 CEBPB UCSC Txn Factor no Conserved 108377739
chr19 6273858 6274117 FOXA1 UCSC Txn Factor no Conserved 108377771
chr19 6273863 6274534 TFAP2C UCSC Txn Factor no Conserved 108377775
chr19 6273867 6274104 FOXA2 UCSC Txn Factor no Conserved 108377777
chr19 6273903 6274239 TFAP2A UCSC Txn Factor no Conserved 108377784
chr19 6273782 6273798 SOX4 JASPAR yes 70794377
chr19 6273782 6273798 SOX4 JASPAR yes 112266694
chr19 6273783 6273798 SOX21 JASPAR yes 70794378
chr19 6273783 6273798 SOX21 JASPAR yes 112266695
chr19 6273819 6273839 ESR1 JASPAR yes 70794379
chr19 6273819 6273839 ESR1 JASPAR yes 112266696
chr19 6273844 6273859 STAT1 JASPAR yes 70794380
chr19 6273844 6273859 STAT1 JASPAR yes 112266697
chr19 6273846 6273857 STAT3 JASPAR yes 70794381
chr19 6273846 6273857 STAT3 JASPAR yes 112266698
chr19 6273854 6273858 YY1 TRANSFAC yes 70794382
chr19 6273854 6273858 YY1 TRANSFAC yes 112266699
chr19 6273862 6273870 MEIS2 JASPAR yes 70794383
chr19 6273862 6273870 MEIS3 JASPAR yes 70794384
chr19 6273862 6273870 MEIS2 JASPAR yes 112266700
chr19 6273862 6273870 MEIS3 JASPAR yes 112266701
chr19 6273863 6273878 AR JASPAR yes 70794385
chr19 6273863 6273878 AR JASPAR yes 112266702
chr19 6273883 6273887 LFA1 TRANSFAC yes 70794386
chr19 6273883 6273887 LFA1 TRANSFAC yes 112266703
chr19 6273890 6273901 E2F1 JASPAR yes 70794387
chr19 6273890 6273901 E2F1 JASPAR yes 112266704
chr19 6273891 6273896 SP1 TRANSFAC yes 70794388
chr19 6273891 6273896 SP1 TRANSFAC yes 112266705
chr19 6273906 6273917 CEBPA JASPAR yes 70794389
chr19 6273906 6273917 CEBPA JASPAR yes 112266706
chr19 6273907 6273918 CEBPB JASPAR yes 70794390
chr19 6273907 6273918 CEBPB JASPAR yes 112266707
chr19 6273913 6273928 PRDM1 JASPAR yes 70794391
chr19 6273913 6273928 PRDM1 JASPAR yes 112266708
chr19 6273938 6273959 ZNF263 JASPAR yes 70794392
chr19 6273938 6273959 ZNF263 JASPAR yes 112266709
chr19 6273939 6273949 SP1 JASPAR yes 70794393
chr19 6273939 6273949 SP1 JASPAR yes 112266710
chr19 6273981 6273995 FOXF2 JASPAR yes 70794394
chr19 6273981 6273995 FOXF2 JASPAR yes 112266711
chr19 6273981 6273996 FOXP1 JASPAR yes 70794395
chr19 6273981 6273996 FOXP1 JASPAR yes 112266712
chr19 6273982 6273993 FOXA1 JASPAR yes 70794396
chr19 6273982 6273993 FOXA1 JASPAR yes 112266713
chr19 6273982 6273997 FOXA1 JASPAR yes 70794397
chr19 6273982 6273997 FOXA1 JASPAR yes 112266714
chr19 6273983 6273994 FOXB1 JASPAR yes 70794398
chr19 6273983 6273994 FOXC1 JASPAR yes 70794399
chr19 6273983 6273994 FOXB1 JASPAR yes 112266715
chr19 6273983 6273994 FOXC1 JASPAR yes 112266716
chr19 6273983 6273995 FOXC2 JASPAR yes 70794400
chr19 6273983 6273995 FOXC2 JASPAR yes 112266717
chr19 6273984 6273995 FOXP2 JASPAR yes 70794401
chr19 6273984 6273995 FOXP2 JASPAR yes 112266718
chr19 6273986 6273993 FOXD2 JASPAR yes 70794402
chr19 6273986 6273993 FOXI1 JASPAR yes 70794403
chr19 6273986 6273993 FOXL1 JASPAR yes 70794404
chr19 6273986 6273993 FOXO4 JASPAR yes 70794405
chr19 6273986 6273993 FOXO6 JASPAR yes 70794406
chr19 6273986 6273993 FOXP3 JASPAR yes 70794407
chr19 6273986 6273993 FOXD2 JASPAR yes 112266719
chr19 6273986 6273993 FOXI1 JASPAR yes 112266720
chr19 6273986 6273993 FOXL1 JASPAR yes 112266721
chr19 6273986 6273993 FOXO4 JASPAR yes 112266722
chr19 6273986 6273993 FOXO6 JASPAR yes 112266723
chr19 6273986 6273993 FOXP3 JASPAR yes 112266724
chr19 6273986 6273994 FOXD1 JASPAR yes 70794408
chr19 6273986 6273994 FOXO3 JASPAR yes 70794409
chr19 6273986 6273994 FOXD1 JASPAR yes 112266725
chr19 6273986 6273994 FOXO3 JASPAR yes 112266726
chr19 6273986 6274000 SPI1 JASPAR yes 70794410
chr19 6273986 6274000 SPIC JASPAR yes 70794411
chr19 6273986 6274000 SPI1 JASPAR yes 112266727
chr19 6273986 6274000 SPIC JASPAR yes 112266728
chr19 6273990 6274000 GABPA JASPAR yes 70794412
chr19 6273990 6274000 GABPA JASPAR yes 112266729
chr19 6273991 6273999 EHF JASPAR yes 70794413
chr19 6273991 6273999 EHF JASPAR yes 112266730
chr19 6274010 6274020 MZF1 JASPAR yes 70794414
chr19 6274010 6274020 MZF1 JASPAR yes 112266731
chr19 6274022 6274036 MTF1 JASPAR yes 70794415
chr19 6274022 6274036 MTF1 JASPAR yes 112266732
chr19 6274038 6274053 HNF4G JASPAR yes 70794416
chr19 6274038 6274053 HNF4G JASPAR yes 112266733
chr19 6274039 6274054 HNF4A JASPAR yes 70794417
chr19 6274039 6274054 HNF4A JASPAR yes 112266734
chr19 6274050 6274069 RFX2 JASPAR yes 70794418
chr19 6274050 6274069 RFX2 JASPAR yes 112266735
chr19 6274067 6274082 TFAP2A JASPAR yes 70794419
chr19 6274067 6274082 TFAP2A JASPAR yes 112266736
chr19 6274068 6274082 EBF1 JASPAR yes 70794420
chr19 6274068 6274082 EBF1 JASPAR yes 112266737
chr19 6274069 6274081 TFAP2A JASPAR yes 70794421
chr19 6274069 6274081 TFAP2B JASPAR yes 70794422
chr19 6274069 6274081 TFAP2C JASPAR yes 70794423
chr19 6274069 6274081 TFAP2A JASPAR yes 112266738
chr19 6274069 6274081 TFAP2B JASPAR yes 112266739
chr19 6274069 6274081 TFAP2C JASPAR yes 112266740
chr19 6274069 6274082 TFAP2A JASPAR yes 70794424
chr19 6274069 6274082 TFAP2B JASPAR yes 70794425
chr19 6274069 6274082 TFAP2C JASPAR yes 70794426
chr19 6274069 6274082 TFAP2A JASPAR yes 112266741
chr19 6274069 6274082 TFAP2B JASPAR yes 112266742
chr19 6274069 6274082 TFAP2C JASPAR yes 112266743
chr19 6274069 6274084 TFAP2A JASPAR yes 70794427
chr19 6274069 6274084 TFAP2C JASPAR yes 70794428
chr19 6274069 6274084 TFAP2A JASPAR yes 112266744
chr19 6274069 6274084 TFAP2C JASPAR yes 112266745
chr19 6274070 6274079 TFAP2A JASPAR yes 70794429
chr19 6274070 6274079 TFAP2A JASPAR yes 112266746
chr19 6274070 6274081 EBF1 JASPAR yes 70794430
chr19 6274070 6274081 EBF1 JASPAR yes 112266747
chr19 6274168 6274182 EBF1 JASPAR yes 70794431
chr19 6274168 6274182 EBF1 JASPAR yes 112266748
chr19 6274170 6274181 EBF1 JASPAR yes 70794432
chr19 6274170 6274181 EBF1 JASPAR yes 112266749
chr19 6274187 6274202 ZIC3 JASPAR yes 70794433
chr19 6274187 6274202 ZIC4 JASPAR yes 70794434
chr19 6274187 6274202 ZIC3 JASPAR yes 112266750
chr19 6274187 6274202 ZIC4 JASPAR yes 112266751
chr19 6274188 6274202 GLIS2 JASPAR yes 70794435
chr19 6274188 6274202 GLIS3 JASPAR yes 70794436
chr19 6274188 6274202 GLIS2 JASPAR yes 112266752
chr19 6274188 6274202 GLIS3 JASPAR yes 112266753
chr19 6274195 6274208 NFKB2 JASPAR yes 70794437
chr19 6274195 6274208 NFKB2 JASPAR yes 112266754
chr19 6274196 6274207 NFKB1 JASPAR yes 70794438
chr19 6274196 6274207 NFKB1 JASPAR yes 112266755
chr19 6274197 6274201 LFA1 TRANSFAC yes 70794439
chr19 6274197 6274201 LFA1 TRANSFAC yes 112266756
chr19 6274203 6274215 ELF4 JASPAR yes 70794440
chr19 6274203 6274215 ELF4 JASPAR yes 112266757
chr19 6274205 6274215 GABPA JASPAR yes 70794441
chr19 6274205 6274215 GABPA JASPAR yes 112266758
chr19 6274207 6274213 ETS1 JASPAR yes 70794442
chr19 6274207 6274213 SPI1 JASPAR yes 70794443
chr19 6274207 6274213 ETS1 JASPAR yes 112266759
chr19 6274207 6274213 SPI1 JASPAR yes 112266760
chr19 6274220 6274223 MYB TRANSFAC yes 70794444
chr19 6274220 6274223 MYB TRANSFAC yes 112266761
chr19 6274238 6274249 HOXC12 JASPAR yes 70794445
chr19 6274238 6274249 HOXC12 JASPAR yes 112266762
chr19 6274239 6274249 HOXC10 JASPAR yes 70794446
chr19 6274239 6274249 HOXD11 JASPAR yes 70794447
chr19 6274239 6274249 HOXC10 JASPAR yes 112266763
chr19 6274239 6274249 HOXD11 JASPAR yes 112266764
chr19 6274243 6274249 TBP TRANSFAC yes 70794448
chr19 6274243 6274249 TBP TRANSFAC yes 112266765
chr19 6274246 6274257 DUX4 JASPAR yes 70794449
chr19 6274246 6274257 DUX4 JASPAR yes 112266766
chr19 6274248 6274253 ETS2 TRANSFAC yes 70794450
chr19 6274248 6274253 ETS2 TRANSFAC yes 112266767
SNP sites on vista28430[chr19:6273754-6274259]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 6273862 rs62106563 G C
CEBPB E2F1 FOXA1 MEIS2 MEIS3
5413913
chr19 6273890 rs184731372 G A
CEBPB E2F1 FOXA1 FOXA2 TFAP2C
5413914
chr19 6273968 rs115697332 C T
CEBPB E2F1 FOXA1 FOXA2 TFAP2A TFAP2C
5413915
chr19 6273974 rs144857967 C T
CEBPB E2F1 FOXA1 FOXA2 TFAP2A TFAP2C
5413916
chr19 6274054 rs117773563 G A
CEBPB E2F1 FOXA1 FOXA2 HNF4A RFX2 TFAP2A TFAP2C
5413917
chr19 6274094 rs62106564 G A
E2F1 FOXA1 FOXA2 TFAP2A TFAP2C
5413918
chr19 6274232 rs113551045 C T
E2F1 TFAP2A TFAP2C
5413919
Genes possibly regulated by vista28430[chr19:6273754-6274259]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 5993175 6199583 - RFX2 ENSG00000087903.8 6199583 0.76 1.0 16879 25829
chr19 6212966 6279959 - MLLT1 ENSG00000130382.7 6279959 0.68 1.0 16881 94300
chr19 6306153 6333640 - ACER1 ENSG00000167769.4 6333640 0.95 1.0 16882 40619
chr19 6361463 6368919 + CLPP ENSG00000125656.4 6361463 0.61 1.0 16883 12796
chr19 6372444 6375042 + ALKBH7 ENSG00000125652.3 6372444 0.61 1.0 16884 1815
Expression level of Genes
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miRNAs possibly regulated by vista28430[chr19:6273754-6274259]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results