EnhancerDB
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  3. vista28431[chr19:6276497-6276777]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28431[chr19:6276497-6276777]
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Tissue distribution of vista28431
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Transcription factor that possibly regulate vista28431[chr19:6276497-6276777]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 6276456 6276705 BHLHE40 UCSC Txn Factor no Conserved 108377841
chr19 6276501 6276515 PAX6 JASPAR yes 70794451
chr19 6276501 6276515 PAX6 JASPAR yes 112267109
chr19 6276510 6276520 ZNF740 JASPAR yes 70794452
chr19 6276510 6276520 ZNF740 JASPAR yes 112267110
chr19 6276512 6276523 NFKB1 JASPAR yes 70794453
chr19 6276512 6276523 NFKB1 JASPAR yes 112267111
chr19 6276525 6276529 H4TF2 TRANSFAC yes 70794454
chr19 6276525 6276529 H4TF2 TRANSFAC yes 112267112
chr19 6276545 6276550 SP1 TRANSFAC yes 70794455
chr19 6276545 6276550 SP1 TRANSFAC yes 112267113
chr19 6276546 6276559 ZBTB18 JASPAR yes 70794456
chr19 6276546 6276559 ZBTB18 JASPAR yes 112267114
chr19 6276568 6276589 REST JASPAR yes 70794457
chr19 6276568 6276589 REST JASPAR yes 112267115
chr19 6276569 6276588 REST JASPAR yes 70794458
chr19 6276569 6276588 REST JASPAR yes 112267116
chr19 6276583 6276603 ESR1 JASPAR yes 70794459
chr19 6276583 6276603 ESR1 JASPAR yes 112267117
chr19 6276586 6276596 SP1 JASPAR yes 70794460
chr19 6276586 6276596 SP1 JASPAR yes 112267118
chr19 6276586 6276604 ESR1 JASPAR yes 70794461
chr19 6276586 6276604 ESR1 JASPAR yes 112267119
chr19 6276588 6276603 ESR2 JASPAR yes 70794462
chr19 6276588 6276603 ESR2 JASPAR yes 112267120
chr19 6276593 6276601 USF1 TRANSFAC yes 70794463
chr19 6276593 6276601 USF1 TRANSFAC yes 112267121
chr19 6276619 6276623 H1TF2 TRANSFAC yes 70794464
chr19 6276619 6276623 NFE TRANSFAC yes 70794465
chr19 6276619 6276623 SRF TRANSFAC yes 70794466
chr19 6276619 6276623 H1TF2 TRANSFAC yes 112267122
chr19 6276619 6276623 NFE TRANSFAC yes 112267123
chr19 6276619 6276623 SRF TRANSFAC yes 112267124
chr19 6276648 6276653 GATA2 JASPAR yes 70794467
chr19 6276648 6276653 GATA2 JASPAR yes 112267125
chr19 6276662 6276672 SP1 JASPAR yes 70794468
chr19 6276662 6276672 SP1 JASPAR yes 112267126
chr19 6276668 6276674 SP1 TRANSFAC yes 70794469
chr19 6276668 6276674 SP1 TRANSFAC yes 112267127
chr19 6276668 6276678 SP1 JASPAR yes 70794470
chr19 6276668 6276678 SP1 JASPAR yes 112267128
chr19 6276669 6276679 SP1 JASPAR yes 70794471
chr19 6276669 6276679 SP1 JASPAR yes 112267129
chr19 6276673 6276682 TFAP2A JASPAR yes 70794472
chr19 6276673 6276682 TFAP2A JASPAR yes 112267130
chr19 6276675 6276685 SP1 JASPAR yes 70794473
chr19 6276675 6276685 SP1 JASPAR yes 112267131
chr19 6276678 6276690 INSM1 JASPAR yes 70794474
chr19 6276678 6276690 INSM1 JASPAR yes 112267132
chr19 6276693 6276713 RREB1 JASPAR yes 70794475
chr19 6276693 6276713 RREB1 JASPAR yes 112267133
chr19 6276696 6276711 RUNX2 JASPAR yes 70794476
chr19 6276696 6276711 RUNX2 JASPAR yes 112267134
chr19 6276697 6276706 RUNX2 JASPAR yes 70794477
chr19 6276697 6276706 RUNX2 JASPAR yes 112267135
chr19 6276697 6276707 RUNX3 JASPAR yes 70794478
chr19 6276697 6276707 RUNX3 JASPAR yes 112267136
chr19 6276718 6276721 MYB TRANSFAC yes 70794479
chr19 6276718 6276721 MYB TRANSFAC yes 112267137
chr19 6276747 6276759 INSM1 JASPAR yes 70794480
chr19 6276747 6276759 INSM1 JASPAR yes 112267138
chr19 6276754 6276760 NFIC JASPAR yes 70794481
chr19 6276754 6276760 NFIC JASPAR yes 112267139
chr19 6276765 6276777 FOXI1 JASPAR yes 70794482
chr19 6276765 6276777 FOXI1 JASPAR yes 112267140
chr19 6276767 6276788 REST JASPAR yes 70794483
chr19 6276767 6276788 REST JASPAR yes 112267141
chr19 6276770 6276785 RUNX2 JASPAR yes 70794484
chr19 6276770 6276785 RUNX2 JASPAR yes 112267142
chr19 6276771 6276782 RUNX1 JASPAR yes 70794485
chr19 6276771 6276782 RUNX1 JASPAR yes 112267143
chr19 6276776 6276796 RREB1 JASPAR yes 70794486
chr19 6276776 6276796 RREB1 JASPAR yes 112267144
SNP sites on vista28431[chr19:6276497-6276777]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 6276510 rs570827936 C A,G,T
BHLHE40 PAX6 ZNF740
5413947
chr19 6276567 rs74897769 C T
BHLHE40
5413948
chr19 6276680 rs112851401 G A
BHLHE40 INSM1 SP1 TFAP2A
5413949
Genes possibly regulated by vista28431[chr19:6276497-6276777]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 5993175 6199583 - RFX2 ENSG00000087903.8 6199583 0.76 1.0 16879 23086
chr19 6212966 6279959 - MLLT1 ENSG00000130382.7 6279959 0.68 1.0 16881 96818
chr19 6306153 6333640 - ACER1 ENSG00000167769.4 6333640 0.95 1.0 16882 43137
chr19 6361463 6368919 + CLPP ENSG00000125656.4 6361463 0.61 1.0 16883 15314
chr19 6372444 6375042 + ALKBH7 ENSG00000125652.3 6372444 0.61 1.0 16884 4333
Expression level of Genes
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miRNAs possibly regulated by vista28431[chr19:6276497-6276777]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results