EnhancerDB
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  3. vista28436[chr19:6516969-6517178]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28436[chr19:6516969-6517178]
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Tissue distribution of vista28436
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Transcription factor that possibly regulate vista28436[chr19:6516969-6517178]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 6516153 6517649 POLR2A UCSC Txn Factor no Conserved 108378108
chr19 6516462 6517050 PHF8 UCSC Txn Factor no Conserved 108378145
chr19 6516781 6517290 MAZ UCSC Txn Factor no Conserved 108378212
chr19 6516865 6517468 CTCF UCSC Txn Factor no Conserved 108378251
chr19 6516925 6517208 SMC3 UCSC Txn Factor no Conserved 108378272
chr19 6516937 6517205 RAD21 UCSC Txn Factor no Conserved 108378277
chr19 6516985 6517446 EBF1 UCSC Txn Factor no Conserved 108378298
chr19 6516988 6516997 ELK4 JASPAR yes 70794645
chr19 6516988 6516997 ELK4 JASPAR yes 112271157
chr19 6516988 6516998 ELK1 JASPAR yes 70794646
chr19 6516988 6516998 ELK3 JASPAR yes 70794647
chr19 6516988 6516998 ERF JASPAR yes 70794648
chr19 6516988 6516998 ETV1 JASPAR yes 70794649
chr19 6516988 6516998 ETV3 JASPAR yes 70794650
chr19 6516988 6516998 ELK1 JASPAR yes 112271158
chr19 6516988 6516998 ELK3 JASPAR yes 112271159
chr19 6516988 6516998 ERF JASPAR yes 112271160
chr19 6516988 6516998 ETV1 JASPAR yes 112271161
chr19 6516988 6516998 ETV3 JASPAR yes 112271162
chr19 6516990 6517001 NFKB1 JASPAR yes 70794651
chr19 6516990 6517001 NFKB1 JASPAR yes 112271163
chr19 6516991 6517001 NFKB1 JASPAR yes 70794652
chr19 6516991 6517001 REL JASPAR yes 70794653
chr19 6516991 6517001 NFKB1 JASPAR yes 112271164
chr19 6516991 6517001 REL JASPAR yes 112271165
chr19 6516996 6517011 ZBTB33 JASPAR yes 70794654
chr19 6516996 6517011 ZBTB33 JASPAR yes 112271166
chr19 6517053 6517070 RARA JASPAR yes 70794655
chr19 6517053 6517070 RARA JASPAR yes 112271167
chr19 6517054 6517058 H4TF2 TRANSFAC yes 70794656
chr19 6517054 6517058 H4TF2 TRANSFAC yes 112271168
chr19 6517054 6517073 CTCF JASPAR yes 70794657
chr19 6517054 6517073 CTCF JASPAR yes 112271169
chr19 6517068 6517080 INSM1 JASPAR yes 70794658
chr19 6517068 6517080 INSM1 JASPAR yes 112271170
chr19 6517105 6517110 SP1 TRANSFAC yes 70794659
chr19 6517105 6517110 SP1 TRANSFAC yes 112271171
chr19 6517105 6517119 PLAG1 JASPAR yes 70794660
chr19 6517105 6517119 PLAG1 JASPAR yes 112271172
chr19 6517124 6517135 EBF1 JASPAR yes 70794661
chr19 6517124 6517135 EBF1 JASPAR yes 112271173
chr19 6517128 6517149 ZNF263 JASPAR yes 70794662
chr19 6517128 6517149 ZNF263 JASPAR yes 112271174
chr19 6517130 6517136 MAZ TRANSFAC yes 70794663
chr19 6517130 6517136 MAZ TRANSFAC yes 112271175
chr19 6517130 6517141 E2F6 JASPAR yes 70794664
chr19 6517130 6517141 E2F6 JASPAR yes 112271176
chr19 6517132 6517140 SP1 TRANSFAC yes 70794665
chr19 6517132 6517140 SP1 TRANSFAC yes 112271177
chr19 6517132 6517142 SP1 JASPAR yes 70794666
chr19 6517132 6517142 SP1 JASPAR yes 112271178
chr19 6517134 6517140 MAZ TRANSFAC yes 70794667
chr19 6517134 6517140 MAZ TRANSFAC yes 112271179
chr19 6517135 6517145 MZF1 JASPAR yes 70794668
chr19 6517135 6517145 MZF1 JASPAR yes 112271180
chr19 6517139 6517150 NFKB1 JASPAR yes 70794669
chr19 6517139 6517150 NFKB1 JASPAR yes 112271181
chr19 6517140 6517150 NFKB1 JASPAR yes 70794670
chr19 6517140 6517150 NFKB1 JASPAR yes 112271182
chr19 6517140 6517151 NFKB1 JASPAR yes 70794671
chr19 6517140 6517151 NFKB1 JASPAR yes 112271183
chr19 6517144 6517148 H4TF2 TRANSFAC yes 70794672
chr19 6517144 6517148 H4TF2 TRANSFAC yes 112271184
chr19 6517145 6517156 EBF1 JASPAR yes 70794673
chr19 6517145 6517156 EBF1 JASPAR yes 112271185
chr19 6517146 6517152 MZF1 JASPAR yes 70794674
chr19 6517146 6517152 MZF1 JASPAR yes 112271186
chr19 6517154 6517159 ETS2 TRANSFAC yes 70794675
chr19 6517154 6517159 ETS2 TRANSFAC yes 112271187
chr19 6517163 6517173 RELA JASPAR yes 70794676
chr19 6517163 6517173 RELA JASPAR yes 112271188
chr19 6517169 6517176 SPIB JASPAR yes 70794677
chr19 6517169 6517176 SPIB JASPAR yes 112271189
SNP sites on vista28436[chr19:6516969-6517178]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 6517022 rs567063541 C T
CTCF EBF1 MAZ PHF8 POLR2A RAD21 SMC3
5414699
chr19 6517122 rs238767 G A
CTCF EBF1 MAZ POLR2A RAD21 SMC3
5414700
chr19 6517163 rs7251888 C A
CTCF EBF1 MAZ POLR2A RAD21 RELA SMC3
5414701
chr19 6517167 rs7252374 A G
CTCF EBF1 MAZ POLR2A RAD21 RELA SMC3
5414702
Genes possibly regulated by vista28436[chr19:6516969-6517178]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 6413359 6424805 - KHSRP ENSG00000088247.11 6424805 0.77 1.0 16887 7836
chr19 6426048 6433790 - SLC25A41 ENSG00000181240.9 6433790 0.83 1.0 16888 16821
chr19 6436090 6465214 - SLC25A23 ENSG00000125648.10 6465214 0.83 1.0 16889 48245
chr19 6463788 6467232 + CRB3 ENSG00000130545.11 6463788 0.86 1.0 16890 46819
chr19 6467218 6482568 - DENND1C ENSG00000205744.5 6482568 0.9 1.0 16891 65599
chr19 6494330 6502859 - TUBB4A ENSG00000104833.6 6502859 0.97 1.0 16892 85890
chr19 6531010 6535931 + TNFSF9 ENSG00000125657.3 6531010 0.91 1.0 16893 86168
chr19 6583194 6604114 - CD70 ENSG00000125726.6 6604114 1.0 0.95 16894 13064
Expression level of Genes
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miRNAs possibly regulated by vista28436[chr19:6516969-6517178]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results