EnhancerDB
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  3. vista28437[chr19:6518032-6518368]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28437[chr19:6518032-6518368]
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Tissue distribution of vista28437
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Transcription factor that possibly regulate vista28437[chr19:6518032-6518368]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 6518160 6518470 RUNX3 UCSC Txn Factor no Conserved 108378362
chr19 6518033 6518037 NFE TRANSFAC yes 70794678
chr19 6518033 6518037 NFE TRANSFAC yes 112271299
chr19 6518034 6518054 RREB1 JASPAR yes 70794679
chr19 6518034 6518054 RREB1 JASPAR yes 112271300
chr19 6518071 6518082 ESRRA JASPAR yes 70794680
chr19 6518071 6518082 ESRRA JASPAR yes 112271301
chr19 6518072 6518087 HNF4A JASPAR yes 70794681
chr19 6518072 6518087 HNF4A JASPAR yes 112271302
chr19 6518073 6518088 HNF4G JASPAR yes 70794682
chr19 6518073 6518088 HNF4G JASPAR yes 112271303
chr19 6518074 6518089 AR JASPAR yes 70794683
chr19 6518074 6518089 AR JASPAR yes 112271304
chr19 6518077 6518083 SOX10 JASPAR yes 70794684
chr19 6518077 6518083 SOX10 JASPAR yes 112271305
chr19 6518112 6518122 SP1 JASPAR yes 70794685
chr19 6518112 6518122 SP1 JASPAR yes 112271306
chr19 6518113 6518128 TFAP2A JASPAR yes 70794686
chr19 6518113 6518128 TFAP2C JASPAR yes 70794687
chr19 6518113 6518128 TFAP2A JASPAR yes 112271307
chr19 6518113 6518128 TFAP2C JASPAR yes 112271308
chr19 6518116 6518127 EBF1 JASPAR yes 70794688
chr19 6518116 6518127 EBF1 JASPAR yes 112271309
chr19 6518116 6518128 TFAP2A JASPAR yes 70794689
chr19 6518116 6518128 TFAP2B JASPAR yes 70794690
chr19 6518116 6518128 TFAP2C JASPAR yes 70794691
chr19 6518116 6518128 TFAP2A JASPAR yes 112271310
chr19 6518116 6518128 TFAP2B JASPAR yes 112271311
chr19 6518116 6518128 TFAP2C JASPAR yes 112271312
chr19 6518116 6518130 EBF1 JASPAR yes 70794692
chr19 6518116 6518130 EBF1 JASPAR yes 112271313
chr19 6518118 6518129 EBF1 JASPAR yes 70794693
chr19 6518118 6518129 EBF1 JASPAR yes 112271314
chr19 6518130 6518141 NFKB1 JASPAR yes 70794694
chr19 6518130 6518141 NFKB1 JASPAR yes 112271315
chr19 6518138 6518153 STAT1 JASPAR yes 70794695
chr19 6518138 6518153 STAT1 JASPAR yes 112271316
chr19 6518160 6518170 RELA JASPAR yes 70794696
chr19 6518160 6518170 RELA JASPAR yes 112271317
chr19 6518160 6518171 NFKB1 JASPAR yes 70794697
chr19 6518160 6518171 NFKB1 JASPAR yes 112271318
chr19 6518161 6518175 STAT1 JASPAR yes 70794698
chr19 6518161 6518175 STAT1 JASPAR yes 112271319
chr19 6518185 6518200 STAT1 JASPAR yes 70794699
chr19 6518185 6518200 STAT1 JASPAR yes 112271320
chr19 6518187 6518198 STAT1 JASPAR yes 70794700
chr19 6518187 6518198 STAT3 JASPAR yes 70794701
chr19 6518187 6518198 STAT1 JASPAR yes 112271321
chr19 6518187 6518198 STAT3 JASPAR yes 112271322
chr19 6518195 6518200 MYC TRANSFAC yes 70794702
chr19 6518195 6518200 MYC TRANSFAC yes 112271323
chr19 6518205 6518224 REST JASPAR yes 70794703
chr19 6518205 6518224 REST JASPAR yes 112271324
chr19 6518221 6518233 INSM1 JASPAR yes 70794704
chr19 6518221 6518233 INSM1 JASPAR yes 112271325
chr19 6518239 6518245 NFE2 TRANSFAC yes 70794705
chr19 6518239 6518245 NFE2 TRANSFAC yes 112271326
chr19 6518255 6518268 NFKB2 JASPAR yes 70794706
chr19 6518255 6518268 NFKB2 JASPAR yes 112271327
chr19 6518256 6518267 NFKB1 JASPAR yes 70794707
chr19 6518256 6518267 NFKB1 JASPAR yes 112271328
chr19 6518261 6518282 ZNF263 JASPAR yes 70794708
chr19 6518261 6518282 ZNF263 JASPAR yes 112271329
chr19 6518262 6518268 MZF1 JASPAR yes 70794709
chr19 6518262 6518268 MZF1 JASPAR yes 112271330
chr19 6518264 6518285 ZNF263 JASPAR yes 70794710
chr19 6518264 6518285 ZNF263 JASPAR yes 112271331
chr19 6518285 6518304 CTCF JASPAR yes 70794711
chr19 6518285 6518304 CTCF JASPAR yes 112271332
chr19 6518287 6518296 THAP1 JASPAR yes 70794712
chr19 6518287 6518296 THAP1 JASPAR yes 112271333
chr19 6518299 6518310 NFKB1 JASPAR yes 70794713
chr19 6518299 6518310 NFKB1 JASPAR yes 112271334
chr19 6518307 6518318 ELK4 JASPAR yes 70794714
chr19 6518307 6518318 FLI1 JASPAR yes 70794715
chr19 6518307 6518318 ELK4 JASPAR yes 112271335
chr19 6518307 6518318 FLI1 JASPAR yes 112271336
chr19 6518308 6518312 YY1 TRANSFAC yes 70794716
chr19 6518308 6518312 YY1 TRANSFAC yes 112271337
chr19 6518308 6518321 ELF1 JASPAR yes 70794717
chr19 6518308 6518321 ELF1 JASPAR yes 112271338
chr19 6518309 6518317 FEV JASPAR yes 70794718
chr19 6518309 6518317 FEV JASPAR yes 112271339
chr19 6518314 6518329 LEF1 JASPAR yes 70794719
chr19 6518314 6518329 LEF1 JASPAR yes 112271340
chr19 6518315 6518329 TCF7L2 JASPAR yes 70794720
chr19 6518315 6518329 TCF7L2 JASPAR yes 112271341
chr19 6518317 6518324 TCF4 TRANSFAC yes 70794721
chr19 6518317 6518324 TCF4 TRANSFAC yes 112271342
chr19 6518318 6518324 LEF1 TRANSFAC yes 70794722
chr19 6518318 6518324 TCF4 TRANSFAC yes 70794723
chr19 6518318 6518324 LEF1 TRANSFAC yes 112271343
chr19 6518318 6518324 TCF4 TRANSFAC yes 112271344
chr19 6518331 6518346 AR JASPAR yes 70794724
chr19 6518331 6518346 AR JASPAR yes 112271345
chr19 6518331 6518348 NR3C1 JASPAR yes 70794725
chr19 6518331 6518348 NR3C2 JASPAR yes 70794726
chr19 6518331 6518348 NR3C1 JASPAR yes 112271346
chr19 6518331 6518348 NR3C2 JASPAR yes 112271347
chr19 6518344 6518349 ETS2 TRANSFAC yes 70794727
chr19 6518344 6518349 ETS2 TRANSFAC yes 112271348
chr19 6518346 6518354 EHF JASPAR yes 70794728
chr19 6518346 6518354 EHF JASPAR yes 112271349
chr19 6518352 6518362 NKX2-3 JASPAR yes 70794729
chr19 6518352 6518362 NKX2-3 JASPAR yes 112271350
chr19 6518353 6518371 ESR1 JASPAR yes 70794730
chr19 6518353 6518371 ESR1 JASPAR yes 112271351
chr19 6518357 6518375 ESR1 JASPAR yes 70794731
chr19 6518357 6518375 ESR1 JASPAR yes 112271352
SNP sites on vista28437[chr19:6518032-6518368]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 6518118 rs117354593 C T
EBF1 SP1 TFAP2A TFAP2B TFAP2C
5414719
chr19 6518342 rs575213288 A G
AR NR3C1 NR3C2 RUNX3
5414720
Genes possibly regulated by vista28437[chr19:6518032-6518368]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 6413359 6424805 - KHSRP ENSG00000088247.11 6424805 0.77 1.0 16887 6773
chr19 6426048 6433790 - SLC25A41 ENSG00000181240.9 6433790 0.83 1.0 16888 15758
chr19 6436090 6465214 - SLC25A23 ENSG00000125648.10 6465214 0.83 1.0 16889 47182
chr19 6463788 6467232 + CRB3 ENSG00000130545.11 6463788 0.86 1.0 16890 45756
chr19 6467218 6482568 - DENND1C ENSG00000205744.5 6482568 0.9 1.0 16891 64536
chr19 6494330 6502859 - TUBB4A ENSG00000104833.6 6502859 0.97 1.0 16892 84827
chr19 6531010 6535931 + TNFSF9 ENSG00000125657.3 6531010 0.91 1.0 16893 87358
chr19 6583194 6604114 - CD70 ENSG00000125726.6 6604114 1.0 0.95 16894 14254
Expression level of Genes
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miRNAs possibly regulated by vista28437[chr19:6518032-6518368]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results