EnhancerDB
  1. Home
  2. Enhancers
  3. vista28441[chr19:6577471-6577956]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28441[chr19:6577471-6577956]
Back to top
Tissue distribution of vista28441
Back to top
Transcription factor that possibly regulate vista28441[chr19:6577471-6577956]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 6577141 6578200 POLR2A UCSC Txn Factor no Conserved 108378629
chr19 6577371 6577750 RUNX3 UCSC Txn Factor no Conserved 108378671
chr19 6577401 6577777 POU2F2 UCSC Txn Factor no Conserved 108378678
chr19 6577704 6578294 IKZF1 UCSC Txn Factor no Conserved 108378708
chr19 6577764 6578080 EBF1 UCSC Txn Factor no Conserved 108378713
chr19 6577888 6578186 SPI1 UCSC Txn Factor no Conserved 108378728
chr19 6577910 6578157 IRF4 UCSC Txn Factor no Conserved 108378730
chr19 6577468 6577478 NKX2-3 JASPAR yes 70794875
chr19 6577468 6577478 NKX2-3 JASPAR yes 112277707
chr19 6577469 6577478 NKX2-8 JASPAR yes 70794876
chr19 6577469 6577478 NKX2-8 JASPAR yes 112277708
chr19 6577492 6577512 RREB1 JASPAR yes 70794877
chr19 6577492 6577512 RREB1 JASPAR yes 112277709
chr19 6577500 6577520 RREB1 JASPAR yes 70794878
chr19 6577500 6577520 RREB1 JASPAR yes 112277710
chr19 6577508 6577522 FOXF2 JASPAR yes 70794879
chr19 6577508 6577522 FOXF2 JASPAR yes 112277711
chr19 6577509 6577517 FOXG1 JASPAR yes 70794880
chr19 6577509 6577517 FOXG1 JASPAR yes 112277712
chr19 6577510 6577520 HOXA13 JASPAR yes 70794881
chr19 6577510 6577520 HOXB13 JASPAR yes 70794882
chr19 6577510 6577520 HOXD13 JASPAR yes 70794883
chr19 6577510 6577520 HOXA13 JASPAR yes 112277713
chr19 6577510 6577520 HOXB13 JASPAR yes 112277714
chr19 6577510 6577520 HOXD13 JASPAR yes 112277715
chr19 6577516 6577536 RREB1 JASPAR yes 70794884
chr19 6577516 6577536 RREB1 JASPAR yes 112277716
chr19 6577519 6577539 RREB1 JASPAR yes 70794885
chr19 6577519 6577539 RREB1 JASPAR yes 112277717
chr19 6577545 6577558 POU2F2 JASPAR yes 70794886
chr19 6577545 6577558 POU2F2 JASPAR yes 112277718
chr19 6577566 6577572 GATA3 JASPAR yes 70794887
chr19 6577566 6577572 GATA3 JASPAR yes 112277719
chr19 6577576 6577591 FOXP1 JASPAR yes 70794888
chr19 6577576 6577591 FOXP1 JASPAR yes 112277720
chr19 6577592 6577612 TP53 JASPAR yes 70794889
chr19 6577592 6577612 TP53 JASPAR yes 112277721
chr19 6577594 6577614 TP63 JASPAR yes 70794890
chr19 6577594 6577614 TP63 JASPAR yes 112277722
chr19 6577595 6577613 TP53 JASPAR yes 70794891
chr19 6577595 6577613 TP63 JASPAR yes 70794892
chr19 6577595 6577613 TP73 JASPAR yes 70794893
chr19 6577595 6577613 TP53 JASPAR yes 112277723
chr19 6577595 6577613 TP63 JASPAR yes 112277724
chr19 6577595 6577613 TP73 JASPAR yes 112277725
chr19 6577596 6577616 TP53 JASPAR yes 70794894
chr19 6577596 6577616 TP53 JASPAR yes 112277726
chr19 6577597 6577612 TP53 JASPAR yes 70794895
chr19 6577597 6577612 TP53 JASPAR yes 112277727
chr19 6577602 6577622 TP53 JASPAR yes 70794896
chr19 6577602 6577622 TP53 JASPAR yes 112277728
chr19 6577604 6577624 TP63 JASPAR yes 70794897
chr19 6577604 6577624 TP63 JASPAR yes 112277729
chr19 6577605 6577623 TP53 JASPAR yes 70794898
chr19 6577605 6577623 TP63 JASPAR yes 70794899
chr19 6577605 6577623 TP73 JASPAR yes 70794900
chr19 6577605 6577623 TP53 JASPAR yes 112277730
chr19 6577605 6577623 TP63 JASPAR yes 112277731
chr19 6577605 6577623 TP73 JASPAR yes 112277732
chr19 6577606 6577621 TP53 JASPAR yes 70794901
chr19 6577606 6577621 TP53 JASPAR yes 112277733
chr19 6577606 6577626 TP53 JASPAR yes 70794902
chr19 6577606 6577626 TP53 JASPAR yes 112277734
chr19 6577607 6577622 TP53 JASPAR yes 70794903
chr19 6577607 6577622 TP53 JASPAR yes 112277735
chr19 6577654 6577668 POU1F1 JASPAR yes 70794904
chr19 6577654 6577668 POU1F1 JASPAR yes 112277736
chr19 6577655 6577667 POU3F1 JASPAR yes 70794905
chr19 6577655 6577667 POU3F1 JASPAR yes 112277737
chr19 6577656 6577660 YY1 TRANSFAC yes 70794906
chr19 6577656 6577660 YY1 TRANSFAC yes 112277738
chr19 6577656 6577668 POU2F1 JASPAR yes 70794907
chr19 6577656 6577668 POU2F1 JASPAR yes 112277739
chr19 6577657 6577666 POU3F4 JASPAR yes 70794908
chr19 6577657 6577666 POU5F1B JASPAR yes 70794909
chr19 6577657 6577666 POU3F4 JASPAR yes 112277740
chr19 6577657 6577666 POU5F1B JASPAR yes 112277741
chr19 6577662 6577682 TBX19 JASPAR yes 70794910
chr19 6577662 6577682 TBX19 JASPAR yes 112277742
chr19 6577664 6577667 MYB TRANSFAC yes 70794911
chr19 6577664 6577667 MYB TRANSFAC yes 112277743
chr19 6577664 6577680 T JASPAR yes 70794912
chr19 6577664 6577680 T JASPAR yes 112277744
chr19 6577671 6577681 TBX21 JASPAR yes 70794913
chr19 6577671 6577681 TBX21 JASPAR yes 112277745
chr19 6577671 6577682 TBX20 JASPAR yes 70794914
chr19 6577671 6577682 TBX2 JASPAR yes 70794915
chr19 6577671 6577682 TBX20 JASPAR yes 112277746
chr19 6577671 6577682 TBX2 JASPAR yes 112277747
chr19 6577672 6577682 TBR1 JASPAR yes 70794916
chr19 6577672 6577682 TBR1 JASPAR yes 112277748
chr19 6577682 6577686 H1TF2 TRANSFAC yes 70794917
chr19 6577682 6577686 NFE TRANSFAC yes 70794918
chr19 6577682 6577686 SRF TRANSFAC yes 70794919
chr19 6577682 6577686 H1TF2 TRANSFAC yes 112277749
chr19 6577682 6577686 NFE TRANSFAC yes 112277750
chr19 6577682 6577686 SRF TRANSFAC yes 112277751
chr19 6577693 6577699 PEA3 TRANSFAC yes 70794920
chr19 6577693 6577699 PEA3 TRANSFAC yes 112277752
chr19 6577696 6577705 SRY JASPAR yes 70794921
chr19 6577696 6577705 SRY JASPAR yes 112277753
chr19 6577726 6577747 ZNF263 JASPAR yes 70794922
chr19 6577726 6577747 ZNF263 JASPAR yes 112277754
chr19 6577748 6577761 SCRT2 JASPAR yes 70794923
chr19 6577748 6577761 SCRT2 JASPAR yes 112277755
chr19 6577748 6577763 SCRT1 JASPAR yes 70794924
chr19 6577748 6577763 SCRT1 JASPAR yes 112277756
chr19 6577761 6577776 SOX21 JASPAR yes 70794925
chr19 6577761 6577776 SOX21 JASPAR yes 112277757
chr19 6577764 6577774 ETV6 JASPAR yes 70794926
chr19 6577764 6577774 ETV6 JASPAR yes 112277758
chr19 6577772 6577783 FOXA1 JASPAR yes 70794927
chr19 6577772 6577783 FOXA1 JASPAR yes 112277759
chr19 6577791 6577803 GLI2 JASPAR yes 70794928
chr19 6577791 6577803 GLI2 JASPAR yes 112277760
chr19 6577792 6577804 ZBTB7A JASPAR yes 70794929
chr19 6577792 6577804 ZBTB7A JASPAR yes 112277761
chr19 6577797 6577801 H4TF2 TRANSFAC yes 70794930
chr19 6577797 6577801 H4TF2 TRANSFAC yes 112277762
chr19 6577820 6577824 TEAD2 TRANSFAC yes 70794931
chr19 6577820 6577824 TEAD2 TRANSFAC yes 112277763
chr19 6577875 6577890 HSF1 JASPAR yes 70794932
chr19 6577875 6577890 HSF1 JASPAR yes 112277764
chr19 6577875 6577891 ZNF143 JASPAR yes 70794933
chr19 6577875 6577891 ZNF143 JASPAR yes 112277765
chr19 6577876 6577889 HSF2 JASPAR yes 70794934
chr19 6577876 6577889 HSF2 JASPAR yes 112277766
chr19 6577903 6577914 EBF1 JASPAR yes 70794935
chr19 6577903 6577914 EBF1 JASPAR yes 112277767
chr19 6577904 6577915 EBF1 JASPAR yes 70794936
chr19 6577904 6577915 EBF1 JASPAR yes 112277768
chr19 6577909 6577914 TFAP2A TRANSFAC yes 70794937
chr19 6577909 6577914 TFAP2A TRANSFAC yes 112277769
chr19 6577909 6577915 MZF1 JASPAR yes 70794938
chr19 6577909 6577915 MZF1 JASPAR yes 112277770
chr19 6577935 6577943 CREB1 JASPAR yes 70794939
chr19 6577935 6577943 CREB1 JASPAR yes 112277771
chr19 6577937 6577942 ATF1 TRANSFAC yes 70794940
chr19 6577937 6577942 ATF1 TRANSFAC yes 112277772
SNP sites on vista28441[chr19:6577471-6577956]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 6577496 rs143293620 A ATG,ATGTGTGTGTGTGTG,ATGTGTGTGTGTGTGTG,ATGTGTGTGTGTGTGTGTG,ATGTGTGTGTGTGTGTGTGTG,ATGTGTGTGTGTGTGTGTGTGTG
POLR2A POU2F2 RREB1 RUNX3
5415473
chr19 6577496 rs551894764 A ATG
POLR2A POU2F2 RREB1 RUNX3
5415474
chr19 6577496 rs559281042 ATG A
POLR2A POU2F2 RREB1 RUNX3
5415475
chr19 6577496 rs61625585 A ATGTGTGTGTGTGTGTGTG,ATGTGTGTGTGTGTGTGTGTGTG
POLR2A POU2F2 RREB1 RUNX3
5415476
chr19 6577536 rs530902577 GT G
POLR2A POU2F2 RREB1 RUNX3
5415477
chr19 6577842 rs380811 C G
EBF1 IKZF1 POLR2A
5415478
chr19 6577870 rs180865390 C G
EBF1 IKZF1 POLR2A
5415479
Genes possibly regulated by vista28441[chr19:6577471-6577956]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 6467218 6482568 - DENND1C ENSG00000205744.5 6482568 0.9 1.0 16891 5097
chr19 6494330 6502859 - TUBB4A ENSG00000104833.6 6502859 0.97 1.0 16892 25388
chr19 6531010 6535931 + TNFSF9 ENSG00000125657.3 6531010 0.91 1.0 16893 53539
chr19 6583194 6604114 - CD70 ENSG00000125726.6 6604114 1.0 0.95 16894 73842
chr19 6663148 6670599 - TNFSF14 ENSG00000125735.6 6670599 0.95 0.94 16895 7357
Expression level of Genes
Back to top
miRNAs possibly regulated by vista28441[chr19:6577471-6577956]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results