EnhancerDB
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  3. vista28442[chr19:6579838-6580006]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28442[chr19:6579838-6580006]
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Tissue distribution of vista28442
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Transcription factor that possibly regulate vista28442[chr19:6579838-6580006]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 6579915 6580109 SPI1 UCSC Txn Factor no Conserved 108378756
chr19 6579841 6579852 GCM1 JASPAR yes 70794941
chr19 6579841 6579852 GCM1 JASPAR yes 112278048
chr19 6579851 6579865 POU1F1 JASPAR yes 70794942
chr19 6579851 6579865 POU1F1 JASPAR yes 112278049
chr19 6579852 6579864 POU3F1 JASPAR yes 70794943
chr19 6579852 6579864 POU3F2 JASPAR yes 70794944
chr19 6579852 6579864 POU3F1 JASPAR yes 112278050
chr19 6579852 6579864 POU3F2 JASPAR yes 112278051
chr19 6579853 6579857 YY1 TRANSFAC yes 70794945
chr19 6579853 6579857 YY1 TRANSFAC yes 112278052
chr19 6579853 6579862 POU5F1B JASPAR yes 70794946
chr19 6579853 6579862 POU5F1B JASPAR yes 112278053
chr19 6579880 6579896 SOX8 JASPAR yes 70794947
chr19 6579880 6579896 SOX8 JASPAR yes 112278054
chr19 6579891 6579912 MAFG JASPAR yes 70794948
chr19 6579891 6579912 MAFG JASPAR yes 112278055
chr19 6579896 6579914 MAFF JASPAR yes 70794949
chr19 6579896 6579914 MAFF JASPAR yes 112278056
chr19 6579897 6579901 NFE TRANSFAC yes 70794950
chr19 6579897 6579901 NFE TRANSFAC yes 112278057
chr19 6579897 6579902 GATA1 TRANSFAC yes 70794951
chr19 6579897 6579902 GATA1 TRANSFAC yes 112278058
chr19 6579897 6579903 GATA3 JASPAR yes 70794952
chr19 6579897 6579903 GATA3 JASPAR yes 112278059
chr19 6579897 6579912 MAFK JASPAR yes 70794953
chr19 6579897 6579912 MAFK JASPAR yes 112278060
chr19 6579924 6579928 YY1 TRANSFAC yes 70794954
chr19 6579924 6579928 YY1 TRANSFAC yes 112278061
chr19 6579936 6579946 HOXA13 JASPAR yes 70794955
chr19 6579936 6579946 HOXA13 JASPAR yes 112278062
chr19 6579940 6579946 TBP TRANSFAC yes 70794956
chr19 6579940 6579946 TBP TRANSFAC yes 112278063
chr19 6579945 6579957 GLI2 JASPAR yes 70794957
chr19 6579945 6579957 GLI2 JASPAR yes 112278064
chr19 6579945 6579960 RUNX2 JASPAR yes 70794958
chr19 6579945 6579960 RUNX2 JASPAR yes 112278065
chr19 6579946 6579956 RUNX3 JASPAR yes 70794959
chr19 6579946 6579956 RUNX3 JASPAR yes 112278066
chr19 6579947 6579961 GLIS2 JASPAR yes 70794960
chr19 6579947 6579961 GLIS3 JASPAR yes 70794961
chr19 6579947 6579961 GLIS2 JASPAR yes 112278067
chr19 6579947 6579961 GLIS3 JASPAR yes 112278068
chr19 6579955 6579961 SOX10 JASPAR yes 70794962
chr19 6579955 6579961 SOX10 JASPAR yes 112278069
chr19 6579958 6579970 GLI2 JASPAR yes 70794963
chr19 6579958 6579970 GLI2 JASPAR yes 112278070
chr19 6579968 6579978 HOXB13 JASPAR yes 70794964
chr19 6579968 6579978 HOXB13 JASPAR yes 112278071
chr19 6579969 6579979 ALX3 JASPAR yes 70794965
chr19 6579969 6579979 EN2 JASPAR yes 70794966
chr19 6579969 6579979 ESX1 JASPAR yes 70794967
chr19 6579969 6579979 GBX1 JASPAR yes 70794968
chr19 6579969 6579979 GBX2 JASPAR yes 70794969
chr19 6579969 6579979 GSX1 JASPAR yes 70794970
chr19 6579969 6579979 GSX2 JASPAR yes 70794971
chr19 6579969 6579979 HESX1 JASPAR yes 70794972
chr19 6579969 6579979 HOXB3 JASPAR yes 70794973
chr19 6579969 6579979 LBX2 JASPAR yes 70794974
chr19 6579969 6579979 LHX2 JASPAR yes 70794975
chr19 6579969 6579979 MIXL1 JASPAR yes 70794976
chr19 6579969 6579979 MNX1 JASPAR yes 70794977
chr19 6579969 6579979 RAX JASPAR yes 70794978
chr19 6579969 6579979 ALX3 JASPAR yes 112278072
chr19 6579969 6579979 EN2 JASPAR yes 112278073
chr19 6579969 6579979 ESX1 JASPAR yes 112278074
chr19 6579969 6579979 GBX1 JASPAR yes 112278075
chr19 6579969 6579979 GBX2 JASPAR yes 112278076
chr19 6579969 6579979 GSX1 JASPAR yes 112278077
chr19 6579969 6579979 GSX2 JASPAR yes 112278078
chr19 6579969 6579979 HESX1 JASPAR yes 112278079
chr19 6579969 6579979 HOXB3 JASPAR yes 112278080
chr19 6579969 6579979 LBX2 JASPAR yes 112278081
chr19 6579969 6579979 LHX2 JASPAR yes 112278082
chr19 6579969 6579979 MIXL1 JASPAR yes 112278083
chr19 6579969 6579979 MNX1 JASPAR yes 112278084
chr19 6579969 6579979 RAX JASPAR yes 112278085
chr19 6579970 6579978 BARX1 JASPAR yes 70794979
chr19 6579970 6579978 BSX JASPAR yes 70794980
chr19 6579970 6579978 DLX6 JASPAR yes 70794981
chr19 6579970 6579978 ISX JASPAR yes 70794982
chr19 6579970 6579978 LBX1 JASPAR yes 70794983
chr19 6579970 6579978 LHX9 JASPAR yes 70794984
chr19 6579970 6579978 MSX1 JASPAR yes 70794985
chr19 6579970 6579978 MSX2 JASPAR yes 70794986
chr19 6579970 6579978 NKX6-2 JASPAR yes 70794987
chr19 6579970 6579978 PRRX1 JASPAR yes 70794988
chr19 6579970 6579978 RAX2 JASPAR yes 70794989
chr19 6579970 6579978 SHOX JASPAR yes 70794990
chr19 6579970 6579978 UNCX JASPAR yes 70794991
chr19 6579970 6579978 BARX1 JASPAR yes 112278086
chr19 6579970 6579978 BSX JASPAR yes 112278087
chr19 6579970 6579978 DLX6 JASPAR yes 112278088
chr19 6579970 6579978 ISX JASPAR yes 112278089
chr19 6579970 6579978 LBX1 JASPAR yes 112278090
chr19 6579970 6579978 LHX9 JASPAR yes 112278091
chr19 6579970 6579978 MSX1 JASPAR yes 112278092
chr19 6579970 6579978 MSX2 JASPAR yes 112278093
chr19 6579970 6579978 NKX6-2 JASPAR yes 112278094
chr19 6579970 6579978 PRRX1 JASPAR yes 112278095
chr19 6579970 6579978 RAX2 JASPAR yes 112278096
chr19 6579970 6579978 SHOX JASPAR yes 112278097
chr19 6579970 6579978 UNCX JASPAR yes 112278098
chr19 6579970 6579979 VENTX JASPAR yes 70794992
chr19 6579970 6579979 VENTX JASPAR yes 112278099
chr19 6579981 6580002 MAFG JASPAR yes 70794993
chr19 6579981 6580002 MAFG JASPAR yes 112278100
chr19 6579982 6579990 GMEB2 JASPAR yes 70794994
chr19 6579982 6579990 GMEB2 JASPAR yes 112278101
chr19 6580004 6580018 SPI1 JASPAR yes 70794995
chr19 6580004 6580018 SPI1 JASPAR yes 112278102
SNP sites on vista28442[chr19:6579838-6580006]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 6579869 rs149085599 T G no 5415524
Genes possibly regulated by vista28442[chr19:6579838-6580006]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 6467218 6482568 - DENND1C ENSG00000205744.5 6482568 0.9 1.0 16891 2730
chr19 6494330 6502859 - TUBB4A ENSG00000104833.6 6502859 0.97 1.0 16892 23021
chr19 6531010 6535931 + TNFSF9 ENSG00000125657.3 6531010 0.91 1.0 16893 51172
chr19 6583194 6604114 - CD70 ENSG00000125726.6 6604114 1.0 0.95 16894 75892
chr19 6663148 6670599 - TNFSF14 ENSG00000125735.6 6670599 0.95 0.94 16895 9407
Expression level of Genes
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miRNAs possibly regulated by vista28442[chr19:6579838-6580006]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results