EnhancerDB
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  3. vista28444[chr19:6588124-6588275]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28444[chr19:6588124-6588275]
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Tissue distribution of vista28444
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Transcription factor that possibly regulate vista28444[chr19:6588124-6588275]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 6586848 6589302 POLR2A UCSC Txn Factor no Conserved 108378825
chr19 6586848 6589302 POLR2A UCSC Txn Factor no Conserved 108378826
chr19 6586848 6589302 POLR2A UCSC Txn Factor no Conserved 108378827
chr19 6588128 6588132 NFE TRANSFAC yes 70795034
chr19 6588128 6588132 NFE TRANSFAC yes 112278895
chr19 6588128 6588133 GATA1 TRANSFAC yes 70795035
chr19 6588128 6588133 GATA1 TRANSFAC yes 112278896
chr19 6588128 6588134 GATA3 JASPAR yes 70795036
chr19 6588128 6588134 GATA3 JASPAR yes 112278897
chr19 6588137 6588145 EHF JASPAR yes 70795037
chr19 6588137 6588145 EHF JASPAR yes 112278898
chr19 6588141 6588146 ETS2 TRANSFAC yes 70795038
chr19 6588141 6588146 ETS2 TRANSFAC yes 112278899
chr19 6588150 6588160 RORA JASPAR yes 70795039
chr19 6588150 6588160 RORA JASPAR yes 112278900
chr19 6588155 6588159 ESR1 TRANSFAC yes 70795040
chr19 6588155 6588159 ESR1 TRANSFAC yes 112278901
chr19 6588156 6588168 HNF1B JASPAR yes 70795041
chr19 6588156 6588168 HNF1B JASPAR yes 112278902
chr19 6588165 6588179 PLAG1 JASPAR yes 70795042
chr19 6588165 6588179 PLAG1 JASPAR yes 112278903
chr19 6588166 6588180 EBF1 JASPAR yes 70795043
chr19 6588166 6588180 EBF1 JASPAR yes 112278904
chr19 6588166 6588181 TFAP2A JASPAR yes 70795044
chr19 6588166 6588181 TFAP2A JASPAR yes 112278905
chr19 6588167 6588178 EBF1 JASPAR yes 70795045
chr19 6588167 6588178 EBF1 JASPAR yes 112278906
chr19 6588175 6588186 FOXP2 JASPAR yes 70795046
chr19 6588175 6588186 FOXP2 JASPAR yes 112278907
chr19 6588175 6588189 FOXF2 JASPAR yes 70795047
chr19 6588175 6588189 FOXF2 JASPAR yes 112278908
chr19 6588176 6588184 FOXD1 JASPAR yes 70795048
chr19 6588176 6588184 FOXG1 JASPAR yes 70795049
chr19 6588176 6588184 FOXO3 JASPAR yes 70795050
chr19 6588176 6588184 FOXD1 JASPAR yes 112278909
chr19 6588176 6588184 FOXG1 JASPAR yes 112278910
chr19 6588176 6588184 FOXO3 JASPAR yes 112278911
chr19 6588177 6588184 FOXD2 JASPAR yes 70795051
chr19 6588177 6588184 FOXI1 JASPAR yes 70795052
chr19 6588177 6588184 FOXL1 JASPAR yes 70795053
chr19 6588177 6588184 FOXO4 JASPAR yes 70795054
chr19 6588177 6588184 FOXO6 JASPAR yes 70795055
chr19 6588177 6588184 FOXP3 JASPAR yes 70795056
chr19 6588177 6588184 FOXD2 JASPAR yes 112278912
chr19 6588177 6588184 FOXI1 JASPAR yes 112278913
chr19 6588177 6588184 FOXL1 JASPAR yes 112278914
chr19 6588177 6588184 FOXO4 JASPAR yes 112278915
chr19 6588177 6588184 FOXO6 JASPAR yes 112278916
chr19 6588177 6588184 FOXP3 JASPAR yes 112278917
chr19 6588177 6588185 FOXO3 JASPAR yes 70795057
chr19 6588177 6588185 FOXO3 JASPAR yes 112278918
chr19 6588195 6588205 ERF JASPAR yes 70795058
chr19 6588195 6588205 ERG JASPAR yes 70795059
chr19 6588195 6588205 ETS1 JASPAR yes 70795060
chr19 6588195 6588205 FLI1 JASPAR yes 70795061
chr19 6588195 6588205 ERF JASPAR yes 112278919
chr19 6588195 6588205 ERG JASPAR yes 112278920
chr19 6588195 6588205 ETS1 JASPAR yes 112278921
chr19 6588195 6588205 FLI1 JASPAR yes 112278922
chr19 6588195 6588206 ETV2 JASPAR yes 70795062
chr19 6588195 6588206 ETV2 JASPAR yes 112278923
chr19 6588195 6588210 STAT1 JASPAR yes 70795063
chr19 6588195 6588210 STAT1 JASPAR yes 112278924
chr19 6588196 6588204 FEV JASPAR yes 70795064
chr19 6588196 6588204 FEV JASPAR yes 112278925
chr19 6588197 6588208 STAT1 JASPAR yes 70795065
chr19 6588197 6588208 STAT1 JASPAR yes 112278926
chr19 6588210 6588218 TBX15 JASPAR yes 70795066
chr19 6588210 6588218 TBX1 JASPAR yes 70795067
chr19 6588210 6588218 TBX4 JASPAR yes 70795068
chr19 6588210 6588218 TBX5 JASPAR yes 70795069
chr19 6588210 6588218 TBX15 JASPAR yes 112278927
chr19 6588210 6588218 TBX1 JASPAR yes 112278928
chr19 6588210 6588218 TBX4 JASPAR yes 112278929
chr19 6588210 6588218 TBX5 JASPAR yes 112278930
chr19 6588211 6588221 FIGLA JASPAR yes 70795070
chr19 6588211 6588221 ID4 JASPAR yes 70795071
chr19 6588211 6588221 MSC JASPAR yes 70795072
chr19 6588211 6588221 TCF3 JASPAR yes 70795073
chr19 6588211 6588221 TCF4 JASPAR yes 70795074
chr19 6588211 6588221 FIGLA JASPAR yes 112278931
chr19 6588211 6588221 ID4 JASPAR yes 112278932
chr19 6588211 6588221 MSC JASPAR yes 112278933
chr19 6588211 6588221 TCF3 JASPAR yes 112278934
chr19 6588211 6588221 TCF4 JASPAR yes 112278935
chr19 6588213 6588218 USF2 TRANSFAC yes 70795075
chr19 6588213 6588218 USF2 TRANSFAC yes 112278936
chr19 6588218 6588222 H4TF2 TRANSFAC yes 70795076
chr19 6588218 6588222 H4TF2 TRANSFAC yes 112278937
chr19 6588221 6588235 PLAG1 JASPAR yes 70795077
chr19 6588221 6588235 PLAG1 JASPAR yes 112278938
chr19 6588223 6588231 MEIS3 JASPAR yes 70795078
chr19 6588223 6588231 MEIS3 JASPAR yes 112278939
chr19 6588224 6588228 NFE TRANSFAC yes 70795079
chr19 6588224 6588228 NFE TRANSFAC yes 112278940
chr19 6588237 6588252 JUND JASPAR yes 70795080
chr19 6588237 6588252 JUND JASPAR yes 112278941
chr19 6588240 6588252 JDP2 JASPAR yes 70795081
chr19 6588240 6588252 JDP2 JASPAR yes 112278942
chr19 6588240 6588255 JUND JASPAR yes 70795082
chr19 6588240 6588255 JUND JASPAR yes 112278943
chr19 6588248 6588267 CTCF JASPAR yes 70795083
chr19 6588248 6588267 CTCF JASPAR yes 112278944
chr19 6588249 6588255 ZNF354C JASPAR yes 70795084
chr19 6588249 6588255 ZNF354C JASPAR yes 112278945
chr19 6588262 6588272 MSC JASPAR yes 70795085
chr19 6588262 6588272 MSC JASPAR yes 112278946
chr19 6588267 6588271 NFE TRANSFAC yes 70795086
chr19 6588267 6588271 NFE TRANSFAC yes 112278947
SNP sites on vista28444[chr19:6588124-6588275]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 6588219 rs562849574 G C
FIGLA H4TF2 ID4 MSC POLR2A TCF3 TCF4
5415687
chr19 6588231 rs344586 C G
MEIS3 PLAG1 POLR2A
5415688
chr19 6588267 rs344587 G A
CTCF MSC NFE POLR2A
5415689
Genes possibly regulated by vista28444[chr19:6588124-6588275]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 6494330 6502859 - TUBB4A ENSG00000104833.6 6502859 0.97 1.0 16892 14735
chr19 6531010 6535931 + TNFSF9 ENSG00000125657.3 6531010 0.91 1.0 16893 42886
chr19 6583194 6604114 - CD70 ENSG00000125726.6 6604114 1.0 0.95 16894 84161
chr19 6663148 6670599 - TNFSF14 ENSG00000125735.6 6670599 0.95 0.94 16895 17676
Expression level of Genes
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miRNAs possibly regulated by vista28444[chr19:6588124-6588275]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results