EnhancerDB
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  3. vista28445[chr19:6588388-6589226]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28445[chr19:6588388-6589226]
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Tissue distribution of vista28445
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Transcription factor that possibly regulate vista28445[chr19:6588388-6589226]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 6586848 6589302 POLR2A UCSC Txn Factor no Conserved 108378825
chr19 6586848 6589302 POLR2A UCSC Txn Factor no Conserved 108378826
chr19 6586848 6589302 POLR2A UCSC Txn Factor no Conserved 108378827
chr19 6588378 6588388 OLIG2 JASPAR yes 70795087
chr19 6588378 6588388 OLIG3 JASPAR yes 70795088
chr19 6588378 6588388 OLIG2 JASPAR yes 112278964
chr19 6588378 6588388 OLIG3 JASPAR yes 112278965
chr19 6588388 6588409 ZNF263 JASPAR yes 70795089
chr19 6588388 6588409 ZNF263 JASPAR yes 112278966
chr19 6588389 6588410 ZNF263 JASPAR yes 70795090
chr19 6588389 6588410 ZNF263 JASPAR yes 112278967
chr19 6588394 6588404 SP1 JASPAR yes 70795091
chr19 6588394 6588404 SP1 JASPAR yes 112278968
chr19 6588394 6588415 ZNF263 JASPAR yes 70795092
chr19 6588394 6588415 ZNF263 JASPAR yes 112278969
chr19 6588395 6588405 SP1 JASPAR yes 70795093
chr19 6588395 6588405 SP1 JASPAR yes 112278970
chr19 6588396 6588402 MAZ TRANSFAC yes 70795094
chr19 6588396 6588402 MAZ TRANSFAC yes 112278971
chr19 6588396 6588406 SP1 JASPAR yes 70795095
chr19 6588396 6588406 SP1 JASPAR yes 112278972
chr19 6588397 6588407 MZF1 JASPAR yes 70795096
chr19 6588397 6588407 SP1 JASPAR yes 70795097
chr19 6588397 6588407 ZNF740 JASPAR yes 70795098
chr19 6588397 6588407 MZF1 JASPAR yes 112278973
chr19 6588397 6588407 SP1 JASPAR yes 112278974
chr19 6588397 6588407 ZNF740 JASPAR yes 112278975
chr19 6588398 6588408 ZNF740 JASPAR yes 70795099
chr19 6588398 6588408 ZNF740 JASPAR yes 112278976
chr19 6588404 6588409 ETS2 TRANSFAC yes 70795100
chr19 6588404 6588409 ETS2 TRANSFAC yes 112278977
chr19 6588416 6588429 NR2F1 JASPAR yes 70795101
chr19 6588416 6588429 NR2F1 JASPAR yes 112278978
chr19 6588420 6588424 ESR1 TRANSFAC yes 70795102
chr19 6588420 6588424 ESR1 TRANSFAC yes 112278979
chr19 6588431 6588452 IRF1 JASPAR yes 70795103
chr19 6588431 6588452 IRF1 JASPAR yes 112278980
chr19 6588435 6588450 PRDM1 JASPAR yes 70795104
chr19 6588435 6588450 PRDM1 JASPAR yes 112278981
chr19 6588449 6588455 SOX10 JASPAR yes 70795105
chr19 6588449 6588455 SOX10 JASPAR yes 112278982
chr19 6588454 6588458 H4TF2 TRANSFAC yes 70795106
chr19 6588454 6588458 H4TF2 TRANSFAC yes 112278983
chr19 6588462 6588473 NFIL3 JASPAR yes 70795107
chr19 6588462 6588473 NFIL3 JASPAR yes 112278984
chr19 6588463 6588467 YY1 TRANSFAC yes 70795108
chr19 6588463 6588467 YY1 TRANSFAC yes 112278985
chr19 6588464 6588474 CEBPD JASPAR yes 70795109
chr19 6588464 6588474 CEBPD JASPAR yes 112278986
chr19 6588468 6588480 YY1 JASPAR yes 70795110
chr19 6588468 6588480 YY1 JASPAR yes 112278987
chr19 6588476 6588481 ETS2 TRANSFAC yes 70795111
chr19 6588476 6588481 ETS2 TRANSFAC yes 112278988
chr19 6588499 6588507 HOXA5 JASPAR yes 70795112
chr19 6588499 6588507 HOXA5 JASPAR yes 112278989
chr19 6588500 6588512 MEF2B JASPAR yes 70795113
chr19 6588500 6588512 MEF2B JASPAR yes 112278990
chr19 6588509 6588523 EBF1 JASPAR yes 70795114
chr19 6588509 6588523 EBF1 JASPAR yes 112278991
chr19 6588511 6588522 EBF1 JASPAR yes 70795115
chr19 6588511 6588522 EBF1 JASPAR yes 112278992
chr19 6588515 6588520 TFAP2A TRANSFAC yes 70795116
chr19 6588515 6588520 TFAP2A TRANSFAC yes 112278993
chr19 6588515 6588521 MZF1 JASPAR yes 70795117
chr19 6588515 6588521 MZF1 JASPAR yes 112278994
chr19 6588526 6588536 NFATC3 JASPAR yes 70795118
chr19 6588526 6588536 NFATC3 JASPAR yes 112278995
chr19 6588526 6588541 FOXP1 JASPAR yes 70795119
chr19 6588526 6588541 FOXP1 JASPAR yes 112278996
chr19 6588528 6588535 NFATC2 JASPAR yes 70795120
chr19 6588528 6588535 NFATC2 JASPAR yes 112278997
chr19 6588532 6588553 IRF1 JASPAR yes 70795121
chr19 6588532 6588553 IRF1 JASPAR yes 112278998
chr19 6588536 6588550 SPI1 JASPAR yes 70795122
chr19 6588536 6588550 SPIC JASPAR yes 70795123
chr19 6588536 6588550 SPI1 JASPAR yes 112278999
chr19 6588536 6588550 SPIC JASPAR yes 112279000
chr19 6588537 6588550 ELF1 JASPAR yes 70795124
chr19 6588537 6588550 ELF1 JASPAR yes 112279001
chr19 6588540 6588547 SPIB JASPAR yes 70795125
chr19 6588540 6588547 SPIB JASPAR yes 112279002
chr19 6588560 6588581 ZNF263 JASPAR yes 70795126
chr19 6588560 6588581 ZNF263 JASPAR yes 112279003
chr19 6588579 6588598 CTCF JASPAR yes 70795127
chr19 6588579 6588598 CTCF JASPAR yes 112279004
chr19 6588604 6588608 YY1 TRANSFAC yes 70795128
chr19 6588604 6588608 YY1 TRANSFAC yes 112279005
chr19 6588610 6588625 TFAP2A JASPAR yes 70795129
chr19 6588610 6588625 TFAP2A JASPAR yes 112279006
chr19 6588613 6588625 TFAP2A JASPAR yes 70795130
chr19 6588613 6588625 TFAP2B JASPAR yes 70795131
chr19 6588613 6588625 TFAP2C JASPAR yes 70795132
chr19 6588613 6588625 TFAP2A JASPAR yes 112279007
chr19 6588613 6588625 TFAP2B JASPAR yes 112279008
chr19 6588613 6588625 TFAP2C JASPAR yes 112279009
chr19 6588618 6588630 PROX1 JASPAR yes 70795133
chr19 6588618 6588630 PROX1 JASPAR yes 112279010
chr19 6588619 6588633 TLX1 JASPAR yes 70795134
chr19 6588619 6588633 TLX1 JASPAR yes 112279011
chr19 6588620 6588634 TLX1 JASPAR yes 70795135
chr19 6588620 6588634 TLX1 JASPAR yes 112279012
chr19 6588628 6588634 NFIC JASPAR yes 70795136
chr19 6588628 6588634 NFIC JASPAR yes 112279013
chr19 6588630 6588634 H1TF2 TRANSFAC yes 70795137
chr19 6588630 6588634 NFE TRANSFAC yes 70795138
chr19 6588630 6588634 SRF TRANSFAC yes 70795139
chr19 6588630 6588634 H1TF2 TRANSFAC yes 112279014
chr19 6588630 6588634 NFE TRANSFAC yes 112279015
chr19 6588630 6588634 SRF TRANSFAC yes 112279016
chr19 6588650 6588660 SP1 JASPAR yes 70795140
chr19 6588650 6588660 SP1 JASPAR yes 112279017
chr19 6588651 6588661 ZNF740 JASPAR yes 70795141
chr19 6588651 6588661 ZNF740 JASPAR yes 112279018
chr19 6588652 6588672 RREB1 JASPAR yes 70795142
chr19 6588652 6588672 RREB1 JASPAR yes 112279019
chr19 6588653 6588663 SP1 JASPAR yes 70795143
chr19 6588653 6588663 ZNF740 JASPAR yes 70795144
chr19 6588653 6588663 SP1 JASPAR yes 112279020
chr19 6588653 6588663 ZNF740 JASPAR yes 112279021
chr19 6588654 6588664 ZNF740 JASPAR yes 70795145
chr19 6588654 6588664 ZNF740 JASPAR yes 112279022
chr19 6588656 6588676 RREB1 JASPAR yes 70795146
chr19 6588656 6588676 RREB1 JASPAR yes 112279023
chr19 6588685 6588698 POU2F2 JASPAR yes 70795147
chr19 6588685 6588698 POU2F2 JASPAR yes 112279024
chr19 6588688 6588699 NFKB1 JASPAR yes 70795148
chr19 6588688 6588699 NFKB1 JASPAR yes 112279025
chr19 6588689 6588699 NFKB1 JASPAR yes 70795149
chr19 6588689 6588699 REL JASPAR yes 70795150
chr19 6588689 6588699 NFKB1 JASPAR yes 112279026
chr19 6588689 6588699 REL JASPAR yes 112279027
chr19 6588694 6588700 MZF1 JASPAR yes 70795151
chr19 6588694 6588700 MZF1 JASPAR yes 112279028
chr19 6588718 6588724 MZF1 JASPAR yes 70795152
chr19 6588718 6588724 MZF1 JASPAR yes 112279029
chr19 6588719 6588729 SP1 JASPAR yes 70795153
chr19 6588719 6588729 SP1 JASPAR yes 112279030
chr19 6588761 6588768 E2F1 TRANSFAC yes 70795154
chr19 6588761 6588768 E2F1 TRANSFAC yes 112279031
chr19 6588774 6588788 CREB3L1 JASPAR yes 70795155
chr19 6588774 6588788 CREB3L1 JASPAR yes 112279032
chr19 6588790 6588805 FOXP1 JASPAR yes 70795156
chr19 6588790 6588805 FOXP1 JASPAR yes 112279033
chr19 6588807 6588822 FOXP1 JASPAR yes 70795157
chr19 6588807 6588822 FOXP1 JASPAR yes 112279034
chr19 6588809 6588821 IRF1 JASPAR yes 70795158
chr19 6588809 6588821 IRF1 JASPAR yes 112279035
chr19 6588814 6588818 YY1 TRANSFAC yes 70795159
chr19 6588814 6588818 YY1 TRANSFAC yes 112279036
chr19 6588823 6588827 ESR1 TRANSFAC yes 70795160
chr19 6588823 6588827 ESR1 TRANSFAC yes 112279037
chr19 6588857 6588862 ETS2 TRANSFAC yes 70795161
chr19 6588857 6588862 ETS2 TRANSFAC yes 112279038
chr19 6588876 6588881 H4TF1 TRANSFAC yes 70795162
chr19 6588876 6588881 H4TF1 TRANSFAC yes 112279039
chr19 6588881 6588885 NFE TRANSFAC yes 70795163
chr19 6588881 6588885 NFE TRANSFAC yes 112279040
chr19 6588933 6588947 POU4F1 JASPAR yes 70795164
chr19 6588933 6588947 POU4F1 JASPAR yes 112279041
chr19 6588934 6588946 MEF2B JASPAR yes 70795165
chr19 6588934 6588946 MEF2D JASPAR yes 70795166
chr19 6588934 6588946 MEF2B JASPAR yes 112279042
chr19 6588934 6588946 MEF2D JASPAR yes 112279043
chr19 6588936 6588940 TEAD2 TRANSFAC yes 70795167
chr19 6588936 6588940 TEAD2 TRANSFAC yes 112279044
chr19 6588936 6588946 GSX1 JASPAR yes 70795168
chr19 6588936 6588946 GSX2 JASPAR yes 70795169
chr19 6588936 6588946 LHX2 JASPAR yes 70795170
chr19 6588936 6588946 MEOX1 JASPAR yes 70795171
chr19 6588936 6588946 MEOX2 JASPAR yes 70795172
chr19 6588936 6588946 MNX1 JASPAR yes 70795173
chr19 6588936 6588946 GSX1 JASPAR yes 112279045
chr19 6588936 6588946 GSX2 JASPAR yes 112279046
chr19 6588936 6588946 LHX2 JASPAR yes 112279047
chr19 6588936 6588946 MEOX1 JASPAR yes 112279048
chr19 6588936 6588946 MEOX2 JASPAR yes 112279049
chr19 6588936 6588946 MNX1 JASPAR yes 112279050
chr19 6588937 6588945 LBX1 JASPAR yes 70795174
chr19 6588937 6588945 PDX1 JASPAR yes 70795175
chr19 6588937 6588945 VAX1 JASPAR yes 70795176
chr19 6588937 6588945 VAX2 JASPAR yes 70795177
chr19 6588937 6588945 VSX1 JASPAR yes 70795178
chr19 6588937 6588945 VSX2 JASPAR yes 70795179
chr19 6588937 6588945 LBX1 JASPAR yes 112279051
chr19 6588937 6588945 PDX1 JASPAR yes 112279052
chr19 6588937 6588945 VAX1 JASPAR yes 112279053
chr19 6588937 6588945 VAX2 JASPAR yes 112279054
chr19 6588937 6588945 VSX1 JASPAR yes 112279055
chr19 6588937 6588945 VSX2 JASPAR yes 112279056
chr19 6588939 6588947 HOXA5 JASPAR yes 70795180
chr19 6588939 6588947 HOXA5 JASPAR yes 112279057
chr19 6588961 6588967 PEA3 TRANSFAC yes 70795181
chr19 6588961 6588967 PEA3 TRANSFAC yes 112279058
chr19 6588961 6588971 SP1 JASPAR yes 70795182
chr19 6588961 6588971 SP1 JASPAR yes 112279059
chr19 6588962 6588970 EHF JASPAR yes 70795183
chr19 6588962 6588970 EHF JASPAR yes 112279060
chr19 6589000 6589003 MYB TRANSFAC yes 70795184
chr19 6589000 6589003 MYB TRANSFAC yes 112279061
chr19 6589007 6589022 LEF1 JASPAR yes 70795185
chr19 6589007 6589022 LEF1 JASPAR yes 112279062
chr19 6589008 6589022 TCF7L2 JASPAR yes 70795186
chr19 6589008 6589022 TCF7L2 JASPAR yes 112279063
chr19 6589010 6589017 TCF4 TRANSFAC yes 70795187
chr19 6589010 6589017 TCF4 TRANSFAC yes 112279064
chr19 6589010 6589018 TCF4 TRANSFAC yes 70795188
chr19 6589010 6589018 TCF4 TRANSFAC yes 112279065
chr19 6589011 6589017 LEF1 TRANSFAC yes 70795189
chr19 6589011 6589017 TCF4 TRANSFAC yes 70795190
chr19 6589011 6589017 LEF1 TRANSFAC yes 112279066
chr19 6589011 6589017 TCF4 TRANSFAC yes 112279067
chr19 6589027 6589048 ZNF263 JASPAR yes 70795191
chr19 6589027 6589048 ZNF263 JASPAR yes 112279068
chr19 6589040 6589061 ZNF263 JASPAR yes 70795192
chr19 6589040 6589061 ZNF263 JASPAR yes 112279069
chr19 6589043 6589064 ZNF263 JASPAR yes 70795193
chr19 6589043 6589064 ZNF263 JASPAR yes 112279070
chr19 6589046 6589067 IRF1 JASPAR yes 70795194
chr19 6589046 6589067 IRF1 JASPAR yes 112279071
chr19 6589050 6589065 PRDM1 JASPAR yes 70795195
chr19 6589050 6589065 PRDM1 JASPAR yes 112279072
chr19 6589051 6589062 E2F6 JASPAR yes 70795196
chr19 6589051 6589062 E2F6 JASPAR yes 112279073
chr19 6589052 6589073 IRF1 JASPAR yes 70795197
chr19 6589052 6589073 IRF1 JASPAR yes 112279074
chr19 6589053 6589074 ZNF263 JASPAR yes 70795198
chr19 6589053 6589074 ZNF263 JASPAR yes 112279075
chr19 6589056 6589071 PRDM1 JASPAR yes 70795199
chr19 6589056 6589071 PRDM1 JASPAR yes 112279076
chr19 6589059 6589080 ZNF263 JASPAR yes 70795200
chr19 6589059 6589080 ZNF263 JASPAR yes 112279077
chr19 6589060 6589075 PRDM1 JASPAR yes 70795201
chr19 6589060 6589075 PRDM1 JASPAR yes 112279078
chr19 6589075 6589081 ZNF354C JASPAR yes 70795202
chr19 6589075 6589081 ZNF354C JASPAR yes 112279079
chr19 6589087 6589093 HiNF-A TRANSFAC yes 70795203
chr19 6589087 6589093 HiNF-A TRANSFAC yes 112279080
chr19 6589101 6589116 PRDM1 JASPAR yes 70795204
chr19 6589101 6589116 PRDM1 JASPAR yes 112279081
chr19 6589101 6589122 ZNF263 JASPAR yes 70795205
chr19 6589101 6589122 ZNF263 JASPAR yes 112279082
chr19 6589105 6589126 ZNF263 JASPAR yes 70795206
chr19 6589105 6589126 ZNF263 JASPAR yes 112279083
chr19 6589107 6589128 ZNF263 JASPAR yes 70795207
chr19 6589107 6589128 ZNF263 JASPAR yes 112279084
chr19 6589109 6589130 ZNF263 JASPAR yes 70795208
chr19 6589109 6589130 ZNF263 JASPAR yes 112279085
chr19 6589112 6589127 PRDM1 JASPAR yes 70795209
chr19 6589112 6589127 PRDM1 JASPAR yes 112279086
chr19 6589116 6589137 ZNF263 JASPAR yes 70795210
chr19 6589116 6589137 ZNF263 JASPAR yes 112279087
chr19 6589119 6589140 ZNF263 JASPAR yes 70795211
chr19 6589119 6589140 ZNF263 JASPAR yes 112279088
chr19 6589121 6589142 ZNF263 JASPAR yes 70795212
chr19 6589121 6589142 ZNF263 JASPAR yes 112279089
chr19 6589128 6589149 IRF1 JASPAR yes 70795213
chr19 6589128 6589149 ZNF263 JASPAR yes 70795214
chr19 6589128 6589149 IRF1 JASPAR yes 112279090
chr19 6589128 6589149 ZNF263 JASPAR yes 112279091
chr19 6589131 6589152 ZNF263 JASPAR yes 70795215
chr19 6589131 6589152 ZNF263 JASPAR yes 112279092
chr19 6589134 6589155 IRF1 JASPAR yes 70795216
chr19 6589134 6589155 ZNF263 JASPAR yes 70795217
chr19 6589134 6589155 IRF1 JASPAR yes 112279093
chr19 6589134 6589155 ZNF263 JASPAR yes 112279094
chr19 6589136 6589151 PRDM1 JASPAR yes 70795218
chr19 6589136 6589151 PRDM1 JASPAR yes 112279095
chr19 6589142 6589147 ETS2 TRANSFAC yes 70795219
chr19 6589142 6589147 ETS2 TRANSFAC yes 112279096
chr19 6589148 6589162 EBF1 JASPAR yes 70795220
chr19 6589148 6589162 EBF1 JASPAR yes 112279097
chr19 6589149 6589160 EBF1 JASPAR yes 70795221
chr19 6589149 6589160 EBF1 JASPAR yes 112279098
chr19 6589150 6589161 EBF1 JASPAR yes 70795222
chr19 6589150 6589161 EBF1 JASPAR yes 112279099
chr19 6589167 6589188 ZNF263 JASPAR yes 70795223
chr19 6589167 6589188 ZNF263 JASPAR yes 112279100
chr19 6589171 6589182 E2F4 JASPAR yes 70795224
chr19 6589171 6589182 E2F4 JASPAR yes 112279101
chr19 6589172 6589193 ZNF263 JASPAR yes 70795225
chr19 6589172 6589193 ZNF263 JASPAR yes 112279102
chr19 6589174 6589180 SP1 TRANSFAC yes 70795226
chr19 6589174 6589180 SP1 TRANSFAC yes 112279103
chr19 6589176 6589181 SP1 TRANSFAC yes 70795227
chr19 6589176 6589181 SP1 TRANSFAC yes 112279104
chr19 6589179 6589194 FOXP1 JASPAR yes 70795228
chr19 6589179 6589194 FOXP1 JASPAR yes 112279105
chr19 6589185 6589206 ZNF263 JASPAR yes 70795229
chr19 6589185 6589206 ZNF263 JASPAR yes 112279106
chr19 6589190 6589211 ZNF263 JASPAR yes 70795230
chr19 6589190 6589211 ZNF263 JASPAR yes 112279107
chr19 6589193 6589203 MZF1 JASPAR yes 70795231
chr19 6589193 6589203 MZF1 JASPAR yes 112279108
chr19 6589199 6589220 ZNF263 JASPAR yes 70795232
chr19 6589199 6589220 ZNF263 JASPAR yes 112279109
chr19 6589203 6589207 NFE TRANSFAC yes 70795233
chr19 6589203 6589207 NFE TRANSFAC yes 112279110
chr19 6589209 6589213 NFE TRANSFAC yes 70795234
chr19 6589209 6589213 NFE TRANSFAC yes 112279111
chr19 6589213 6589223 GABPA JASPAR yes 70795235
chr19 6589213 6589223 GABPA JASPAR yes 112279112
chr19 6589213 6589226 ELF1 JASPAR yes 70795236
chr19 6589213 6589226 ELF1 JASPAR yes 112279113
chr19 6589214 6589235 ZNF263 JASPAR yes 70795237
chr19 6589214 6589235 ZNF263 JASPAR yes 112279114
chr19 6589216 6589223 SPIB JASPAR yes 70795238
chr19 6589216 6589223 SPIB JASPAR yes 112279115
chr19 6589217 6589238 ZNF263 JASPAR yes 70795239
chr19 6589217 6589238 ZNF263 JASPAR yes 112279116
SNP sites on vista28445[chr19:6588388-6589226]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 6588404 rs344588 G A,C
ETS2 MZF1 POLR2A SP1 ZNF263 ZNF740
5415690
chr19 6588448 rs150079187 C A
IRF1 POLR2A PRDM1
5415691
chr19 6588697 rs117473400 C T
MZF1 NFKB1 POLR2A POU2F2 REL
5415692
chr19 6588708 rs115621689 C A
POLR2A
5415693
chr19 6588899 rs182849641 G A
POLR2A
5415694
chr19 6588903 rs75041397 G A
POLR2A
5415695
chr19 6588974 rs565193859 G C
POLR2A
5415696
chr19 6589104 rs112208858 G T
POLR2A PRDM1 ZNF263
5415697
chr19 6589108 rs7247830 T G
POLR2A PRDM1 ZNF263
5415698
Genes possibly regulated by vista28445[chr19:6588388-6589226]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 6494330 6502859 - TUBB4A ENSG00000104833.6 6502859 0.97 1.0 16892 14471
chr19 6531010 6535931 + TNFSF9 ENSG00000125657.3 6531010 0.91 1.0 16893 42622
chr19 6583194 6604114 - CD70 ENSG00000125726.6 6604114 1.0 0.95 16894 85112
chr19 6663148 6670599 - TNFSF14 ENSG00000125735.6 6670599 0.95 0.94 16895 18627
Expression level of Genes
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miRNAs possibly regulated by vista28445[chr19:6588388-6589226]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results