EnhancerDB
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  3. vista28448[chr19:6593602-6593939]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28448[chr19:6593602-6593939]
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Tissue distribution of vista28448
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Transcription factor that possibly regulate vista28448[chr19:6593602-6593939]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 6593615 6593630 LEF1 JASPAR yes 70795322
chr19 6593632 6593642 SREBF1 JASPAR yes 70795323
chr19 6593632 6593642 SREBF2 JASPAR yes 70795324
chr19 6593633 6593641 MGA JASPAR yes 70795325
chr19 6593638 6593653 HNF4G JASPAR yes 70795326
chr19 6593639 6593653 NR2F1 JASPAR yes 70795327
chr19 6593639 6593654 HNF4A JASPAR yes 70795328
chr19 6593639 6593654 HNF4A JASPAR yes 112279274
chr19 6593648 6593652 H4TF2 TRANSFAC yes 70795329
chr19 6593676 6593682 SOX10 JASPAR yes 70795330
chr19 6593676 6593682 SOX10 JASPAR yes 112279275
chr19 6593699 6593705 SOX10 JASPAR yes 70795331
chr19 6593699 6593705 SOX10 JASPAR yes 112279276
chr19 6593704 6593715 ESRRB JASPAR yes 70795332
chr19 6593704 6593715 ESRRB JASPAR yes 112279277
chr19 6593709 6593719 EN2 JASPAR yes 70795333
chr19 6593709 6593719 ESX1 JASPAR yes 70795334
chr19 6593709 6593719 GBX1 JASPAR yes 70795335
chr19 6593709 6593719 GBX2 JASPAR yes 70795336
chr19 6593709 6593719 GSX2 JASPAR yes 70795337
chr19 6593709 6593719 HESX1 JASPAR yes 70795338
chr19 6593709 6593719 HOXB3 JASPAR yes 70795339
chr19 6593709 6593719 LBX2 JASPAR yes 70795340
chr19 6593709 6593719 LHX2 JASPAR yes 70795341
chr19 6593709 6593719 MIXL1 JASPAR yes 70795342
chr19 6593709 6593719 MNX1 JASPAR yes 70795343
chr19 6593709 6593719 RAX JASPAR yes 70795344
chr19 6593709 6593719 EN2 JASPAR yes 112279278
chr19 6593709 6593719 ESX1 JASPAR yes 112279279
chr19 6593709 6593719 GBX1 JASPAR yes 112279280
chr19 6593709 6593719 GBX2 JASPAR yes 112279281
chr19 6593709 6593719 GSX2 JASPAR yes 112279282
chr19 6593709 6593719 HESX1 JASPAR yes 112279283
chr19 6593709 6593719 HOXB3 JASPAR yes 112279284
chr19 6593709 6593719 LBX2 JASPAR yes 112279285
chr19 6593709 6593719 LHX2 JASPAR yes 112279286
chr19 6593709 6593719 MIXL1 JASPAR yes 112279287
chr19 6593709 6593719 MNX1 JASPAR yes 112279288
chr19 6593709 6593719 RAX JASPAR yes 112279289
chr19 6593710 6593714 H1TF2 TRANSFAC yes 70795345
chr19 6593710 6593714 NFE TRANSFAC yes 70795346
chr19 6593710 6593714 SRF TRANSFAC yes 70795347
chr19 6593710 6593714 H1TF2 TRANSFAC yes 112279290
chr19 6593710 6593714 NFE TRANSFAC yes 112279291
chr19 6593710 6593714 SRF TRANSFAC yes 112279292
chr19 6593710 6593718 BARX1 JASPAR yes 70795348
chr19 6593710 6593718 BSX JASPAR yes 70795349
chr19 6593710 6593718 DLX6 JASPAR yes 70795350
chr19 6593710 6593718 ISX JASPAR yes 70795351
chr19 6593710 6593718 LBX1 JASPAR yes 70795352
chr19 6593710 6593718 LHX9 JASPAR yes 70795353
chr19 6593710 6593718 MSX1 JASPAR yes 70795354
chr19 6593710 6593718 MSX2 JASPAR yes 70795355
chr19 6593710 6593718 NKX6-2 JASPAR yes 70795356
chr19 6593710 6593718 PRRX1 JASPAR yes 70795357
chr19 6593710 6593718 RAX2 JASPAR yes 70795358
chr19 6593710 6593718 SHOX JASPAR yes 70795359
chr19 6593710 6593718 UNCX JASPAR yes 70795360
chr19 6593710 6593718 BARX1 JASPAR yes 112279293
chr19 6593710 6593718 BSX JASPAR yes 112279294
chr19 6593710 6593718 DLX6 JASPAR yes 112279295
chr19 6593710 6593718 ISX JASPAR yes 112279296
chr19 6593710 6593718 LBX1 JASPAR yes 112279297
chr19 6593710 6593718 LHX9 JASPAR yes 112279298
chr19 6593710 6593718 MSX1 JASPAR yes 112279299
chr19 6593710 6593718 MSX2 JASPAR yes 112279300
chr19 6593710 6593718 NKX6-2 JASPAR yes 112279301
chr19 6593710 6593718 PRRX1 JASPAR yes 112279302
chr19 6593710 6593718 RAX2 JASPAR yes 112279303
chr19 6593710 6593718 SHOX JASPAR yes 112279304
chr19 6593710 6593718 UNCX JASPAR yes 112279305
chr19 6593710 6593720 HOXB13 JASPAR yes 70795361
chr19 6593710 6593720 HOXB13 JASPAR yes 112279306
chr19 6593712 6593724 POU2F1 JASPAR yes 70795362
chr19 6593712 6593724 POU2F1 JASPAR yes 112279307
chr19 6593715 6593718 MYB TRANSFAC yes 70795363
chr19 6593715 6593718 MYB TRANSFAC yes 112279308
chr19 6593716 6593727 NRL JASPAR yes 70795364
chr19 6593716 6593727 NRL JASPAR yes 112279309
chr19 6593722 6593734 TEAD1 JASPAR yes 70795365
chr19 6593722 6593734 TEAD1 JASPAR yes 112279310
chr19 6593745 6593757 INSM1 JASPAR yes 70795366
chr19 6593745 6593757 INSM1 JASPAR yes 112279311
chr19 6593747 6593757 GCM2 JASPAR yes 70795367
chr19 6593747 6593757 GCM2 JASPAR yes 112279312
chr19 6593747 6593758 GCM1 JASPAR yes 70795368
chr19 6593747 6593758 GCM1 JASPAR yes 112279313
chr19 6593770 6593781 FOXB1 JASPAR yes 70795369
chr19 6593770 6593781 FOXC1 JASPAR yes 70795370
chr19 6593770 6593781 FOXB1 JASPAR yes 112279314
chr19 6593770 6593781 FOXC1 JASPAR yes 112279315
chr19 6593770 6593782 FOXC2 JASPAR yes 70795371
chr19 6593770 6593782 FOXC2 JASPAR yes 112279316
chr19 6593777 6593790 DUXA JASPAR yes 70795372
chr19 6593777 6593790 DUXA JASPAR yes 112279317
chr19 6593778 6593789 DUX4 JASPAR yes 70795373
chr19 6593778 6593789 DUX4 JASPAR yes 112279318
chr19 6593804 6593818 ONECUT1 JASPAR yes 70795374
chr19 6593804 6593818 ONECUT2 JASPAR yes 70795375
chr19 6593804 6593818 ONECUT3 JASPAR yes 70795376
chr19 6593804 6593818 ONECUT1 JASPAR yes 112279319
chr19 6593804 6593818 ONECUT2 JASPAR yes 112279320
chr19 6593804 6593818 ONECUT3 JASPAR yes 112279321
chr19 6593805 6593820 FOXA1 JASPAR yes 70795377
chr19 6593805 6593820 FOXA1 JASPAR yes 112279322
chr19 6593806 6593817 FOXB1 JASPAR yes 70795378
chr19 6593806 6593817 FOXC1 JASPAR yes 70795379
chr19 6593806 6593817 FOXB1 JASPAR yes 112279323
chr19 6593806 6593817 FOXC1 JASPAR yes 112279324
chr19 6593806 6593818 FOXC2 JASPAR yes 70795380
chr19 6593806 6593818 FOXC2 JASPAR yes 112279325
chr19 6593807 6593817 CUX1 JASPAR yes 70795381
chr19 6593807 6593817 CUX2 JASPAR yes 70795382
chr19 6593807 6593817 CUX1 JASPAR yes 112279326
chr19 6593807 6593817 CUX2 JASPAR yes 112279327
chr19 6593830 6593837 MEIS1 JASPAR yes 70795383
chr19 6593830 6593837 MEIS1 JASPAR yes 112279328
chr19 6593830 6593838 MEIS2 JASPAR yes 70795384
chr19 6593830 6593838 MEIS2 JASPAR yes 112279329
chr19 6593833 6593847 GATA2 JASPAR yes 70795385
chr19 6593833 6593847 GATA2 JASPAR yes 112279330
chr19 6593835 6593843 GATA5 JASPAR yes 70795386
chr19 6593835 6593843 GATA5 JASPAR yes 112279331
chr19 6593838 6593841 MYB TRANSFAC yes 70795387
chr19 6593838 6593841 MYB TRANSFAC yes 112279332
chr19 6593856 6593866 NFATC3 JASPAR yes 70795388
chr19 6593856 6593866 NFATC3 JASPAR yes 112279333
chr19 6593858 6593865 NFATC2 JASPAR yes 70795389
chr19 6593858 6593865 NFATC2 JASPAR yes 112279334
chr19 6593861 6593871 OLIG2 JASPAR yes 70795390
chr19 6593861 6593871 OLIG3 JASPAR yes 70795391
chr19 6593861 6593871 OLIG2 JASPAR yes 112279335
chr19 6593861 6593871 OLIG3 JASPAR yes 112279336
chr19 6593865 6593878 ATF4 JASPAR yes 70795392
chr19 6593865 6593878 ATF4 JASPAR yes 112279337
chr19 6593865 6593880 JUND JASPAR yes 70795393
chr19 6593865 6593880 JUND JASPAR yes 112279338
chr19 6593866 6593879 JUN JASPAR yes 70795394
chr19 6593866 6593879 JUN JASPAR yes 112279339
chr19 6593870 6593883 ZBTB18 JASPAR yes 70795395
chr19 6593870 6593883 ZBTB18 JASPAR yes 112279340
chr19 6593883 6593890 PEA3 TRANSFAC yes 70795396
chr19 6593883 6593890 PEA3 TRANSFAC yes 112279341
chr19 6593884 6593898 JUN JASPAR yes 70795397
chr19 6593884 6593898 JUN JASPAR yes 112279342
chr19 6593887 6593898 JUNB JASPAR yes 70795398
chr19 6593887 6593898 JUNB JASPAR yes 112279343
chr19 6593888 6593899 FOS JASPAR yes 70795399
chr19 6593888 6593899 JUND JASPAR yes 70795400
chr19 6593888 6593899 FOS JASPAR yes 112279344
chr19 6593888 6593899 JUND JASPAR yes 112279345
chr19 6593899 6593917 NR3C1 JASPAR yes 70795401
chr19 6593899 6593917 NR3C1 JASPAR yes 112279346
chr19 6593900 6593904 H4TF2 TRANSFAC yes 70795402
chr19 6593900 6593904 H4TF2 TRANSFAC yes 112279347
chr19 6593912 6593919 NFATC2 JASPAR yes 70795403
chr19 6593912 6593919 NFATC2 JASPAR yes 112279348
chr19 6593918 6593932 TCF7L2 JASPAR yes 70795404
chr19 6593918 6593932 TCF7L2 JASPAR yes 112279349
chr19 6593922 6593928 TCF1 TRANSFAC yes 70795405
chr19 6593922 6593928 TCF1 TRANSFAC yes 112279350
chr19 6593936 6593939 MYB TRANSFAC yes 70795406
chr19 6593936 6593939 MYB TRANSFAC yes 112279351
chr19 6593936 6593947 ELK4 JASPAR yes 70795407
chr19 6593936 6593947 FLI1 JASPAR yes 70795408
chr19 6593936 6593947 ELK4 JASPAR yes 112279352
chr19 6593936 6593947 FLI1 JASPAR yes 112279353
chr19 6593937 6593947 ELK3 JASPAR yes 70795409
chr19 6593937 6593947 ERF JASPAR yes 70795410
chr19 6593937 6593947 ERG JASPAR yes 70795411
chr19 6593937 6593947 ETS1 JASPAR yes 70795412
chr19 6593937 6593947 ETV6 JASPAR yes 70795413
chr19 6593937 6593947 FEV JASPAR yes 70795414
chr19 6593937 6593947 FLI1 JASPAR yes 70795415
chr19 6593937 6593947 GABPA JASPAR yes 70795416
chr19 6593937 6593947 ELK3 JASPAR yes 112279354
chr19 6593937 6593947 ERF JASPAR yes 112279355
chr19 6593937 6593947 ERG JASPAR yes 112279356
chr19 6593937 6593947 ETS1 JASPAR yes 112279357
chr19 6593937 6593947 ETV6 JASPAR yes 112279358
chr19 6593937 6593947 FEV JASPAR yes 112279359
chr19 6593937 6593947 FLI1 JASPAR yes 112279360
chr19 6593937 6593947 GABPA JASPAR yes 112279361
chr19 6593937 6593948 ETV2 JASPAR yes 70795417
chr19 6593937 6593948 ETV2 JASPAR yes 112279362
chr19 6593937 6593950 ELF1 JASPAR yes 70795418
chr19 6593937 6593950 ELF1 JASPAR yes 112279363
chr19 6593938 6593945 SPI1 JASPAR yes 70795419
chr19 6593938 6593945 SPI1 JASPAR yes 112279364
chr19 6593938 6593946 EHF JASPAR yes 70795420
chr19 6593938 6593946 FEV JASPAR yes 70795421
chr19 6593938 6593946 EHF JASPAR yes 112279365
chr19 6593938 6593946 FEV JASPAR yes 112279366
SNP sites on vista28448[chr19:6593602-6593939]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 6593602 rs344595 C T no 5415763
chr19 6593721 rs370096103 T TGCTGAGGA
NRL POU2F1
5415764
chr19 6593732 rs115532093 G A
TEAD1
5415765
chr19 6593847 rs78911707 T C
GATA2
5415766
chr19 6593869 rs148990202 G A
ATF4 JUN JUND OLIG2 OLIG3
5415767
Genes possibly regulated by vista28448[chr19:6593602-6593939]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 6494330 6502859 - TUBB4A ENSG00000104833.6 6502859 0.97 1.0 16892 9257
chr19 6531010 6535931 + TNFSF9 ENSG00000125657.3 6531010 0.91 1.0 16893 37408
chr19 6583194 6604114 - CD70 ENSG00000125726.6 6604114 1.0 0.95 16894 89825
chr19 6663148 6670599 - TNFSF14 ENSG00000125735.6 6670599 0.95 0.94 16895 23340
Expression level of Genes
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miRNAs possibly regulated by vista28448[chr19:6593602-6593939]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results