EnhancerDB
  1. Home
  2. Enhancers
  3. vista28450[chr19:6600003-6600291]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28450[chr19:6600003-6600291]
Back to top
Tissue distribution of vista28450
Back to top
Transcription factor that possibly regulate vista28450[chr19:6600003-6600291]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 6599998 6600015 ZNF410 JASPAR yes 70795444
chr19 6599998 6600015 ZNF410 JASPAR yes 112280558
chr19 6600005 6600018 NFKB2 JASPAR yes 70795445
chr19 6600005 6600018 NFKB2 JASPAR yes 112280559
chr19 6600006 6600016 NFKB1 JASPAR yes 70795446
chr19 6600006 6600016 NFKB1 JASPAR yes 112280560
chr19 6600006 6600017 NFKB1 JASPAR yes 70795447
chr19 6600006 6600017 NFKB1 JASPAR yes 112280561
chr19 6600010 6600014 NFE TRANSFAC yes 70795448
chr19 6600010 6600014 NFE TRANSFAC yes 112280562
chr19 6600014 6600020 SP1 TRANSFAC yes 70795449
chr19 6600014 6600020 SP1 TRANSFAC yes 112280563
chr19 6600023 6600026 MYB TRANSFAC yes 70795450
chr19 6600023 6600026 MYB TRANSFAC yes 112280564
chr19 6600040 6600058 NR3C1 JASPAR yes 70795451
chr19 6600040 6600058 NR3C1 JASPAR yes 112280565
chr19 6600042 6600057 ESR2 JASPAR yes 70795452
chr19 6600042 6600057 ESR2 JASPAR yes 112280566
chr19 6600042 6600062 ESR1 JASPAR yes 70795453
chr19 6600042 6600062 ESR1 JASPAR yes 112280567
chr19 6600043 6600047 ESR1 TRANSFAC yes 70795454
chr19 6600043 6600047 ESR1 TRANSFAC yes 112280568
chr19 6600069 6600079 SREBF2 JASPAR yes 70795455
chr19 6600069 6600079 SREBF2 JASPAR yes 112280569
chr19 6600069 6600080 USF1 JASPAR yes 70795456
chr19 6600069 6600080 USF2 JASPAR yes 70795457
chr19 6600069 6600080 USF1 JASPAR yes 112280570
chr19 6600069 6600080 USF2 JASPAR yes 112280571
chr19 6600078 6600090 ZBTB7A JASPAR yes 70795458
chr19 6600078 6600090 ZBTB7A JASPAR yes 112280572
chr19 6600079 6600084 SP1 TRANSFAC yes 70795459
chr19 6600079 6600084 SP1 TRANSFAC yes 112280573
chr19 6600082 6600096 PLAG1 JASPAR yes 70795460
chr19 6600082 6600096 PLAG1 JASPAR yes 112280574
chr19 6600116 6600120 YY1 TRANSFAC yes 70795461
chr19 6600116 6600120 YY1 TRANSFAC yes 112280575
chr19 6600117 6600132 NFYB JASPAR yes 70795462
chr19 6600117 6600132 NFYB JASPAR yes 112280576
chr19 6600123 6600133 EN2 JASPAR yes 70795463
chr19 6600123 6600133 ESX1 JASPAR yes 70795464
chr19 6600123 6600133 GBX1 JASPAR yes 70795465
chr19 6600123 6600133 GBX2 JASPAR yes 70795466
chr19 6600123 6600133 GSX2 JASPAR yes 70795467
chr19 6600123 6600133 HESX1 JASPAR yes 70795468
chr19 6600123 6600133 LBX2 JASPAR yes 70795469
chr19 6600123 6600133 LHX2 JASPAR yes 70795470
chr19 6600123 6600133 MIXL1 JASPAR yes 70795471
chr19 6600123 6600133 RAX JASPAR yes 70795472
chr19 6600123 6600133 EN2 JASPAR yes 112280577
chr19 6600123 6600133 ESX1 JASPAR yes 112280578
chr19 6600123 6600133 GBX1 JASPAR yes 112280579
chr19 6600123 6600133 GBX2 JASPAR yes 112280580
chr19 6600123 6600133 GSX2 JASPAR yes 112280581
chr19 6600123 6600133 HESX1 JASPAR yes 112280582
chr19 6600123 6600133 LBX2 JASPAR yes 112280583
chr19 6600123 6600133 LHX2 JASPAR yes 112280584
chr19 6600123 6600133 MIXL1 JASPAR yes 112280585
chr19 6600123 6600133 RAX JASPAR yes 112280586
chr19 6600124 6600128 H1TF2 TRANSFAC yes 70795473
chr19 6600124 6600128 NFE TRANSFAC yes 70795474
chr19 6600124 6600128 SRF TRANSFAC yes 70795475
chr19 6600124 6600128 H1TF2 TRANSFAC yes 112280587
chr19 6600124 6600128 NFE TRANSFAC yes 112280588
chr19 6600124 6600128 SRF TRANSFAC yes 112280589
chr19 6600124 6600132 BARX1 JASPAR yes 70795476
chr19 6600124 6600132 BSX JASPAR yes 70795477
chr19 6600124 6600132 EN1 JASPAR yes 70795478
chr19 6600124 6600132 ISX JASPAR yes 70795479
chr19 6600124 6600132 LHX9 JASPAR yes 70795480
chr19 6600124 6600132 MSX1 JASPAR yes 70795481
chr19 6600124 6600132 MSX2 JASPAR yes 70795482
chr19 6600124 6600132 PRRX1 JASPAR yes 70795483
chr19 6600124 6600132 RAX2 JASPAR yes 70795484
chr19 6600124 6600132 SHOX JASPAR yes 70795485
chr19 6600124 6600132 BARX1 JASPAR yes 112280590
chr19 6600124 6600132 BSX JASPAR yes 112280591
chr19 6600124 6600132 EN1 JASPAR yes 112280592
chr19 6600124 6600132 ISX JASPAR yes 112280593
chr19 6600124 6600132 LHX9 JASPAR yes 112280594
chr19 6600124 6600132 MSX1 JASPAR yes 112280595
chr19 6600124 6600132 MSX2 JASPAR yes 112280596
chr19 6600124 6600132 PRRX1 JASPAR yes 112280597
chr19 6600124 6600132 RAX2 JASPAR yes 112280598
chr19 6600124 6600132 SHOX JASPAR yes 112280599
chr19 6600127 6600142 FOXP1 JASPAR yes 70795486
chr19 6600127 6600142 FOXP1 JASPAR yes 112280600
chr19 6600129 6600144 MEF2C JASPAR yes 70795487
chr19 6600129 6600144 MEF2C JASPAR yes 112280601
chr19 6600129 6600150 IRF1 JASPAR yes 70795488
chr19 6600129 6600150 IRF1 JASPAR yes 112280602
chr19 6600130 6600138 GATA3 JASPAR yes 70795489
chr19 6600130 6600138 GATA3 JASPAR yes 112280603
chr19 6600130 6600151 IRF1 JASPAR yes 70795490
chr19 6600130 6600151 IRF1 JASPAR yes 112280604
chr19 6600131 6600146 FOXP1 JASPAR yes 70795491
chr19 6600131 6600146 FOXP1 JASPAR yes 112280605
chr19 6600132 6600147 FOXP1 JASPAR yes 70795492
chr19 6600132 6600147 FOXP1 JASPAR yes 112280606
chr19 6600133 6600139 TBP TRANSFAC yes 70795493
chr19 6600133 6600139 TBP TRANSFAC yes 112280607
chr19 6600133 6600148 FOXP1 JASPAR yes 70795494
chr19 6600133 6600148 FOXP1 JASPAR yes 112280608
chr19 6600134 6600149 FOXP1 JASPAR yes 70795495
chr19 6600134 6600149 FOXP1 JASPAR yes 112280609
chr19 6600134 6600155 IRF1 JASPAR yes 70795496
chr19 6600134 6600155 IRF1 JASPAR yes 112280610
chr19 6600135 6600150 FOXP1 JASPAR yes 70795497
chr19 6600135 6600150 FOXP1 JASPAR yes 112280611
chr19 6600135 6600156 IRF1 JASPAR yes 70795498
chr19 6600135 6600156 IRF1 JASPAR yes 112280612
chr19 6600136 6600151 FOXP1 JASPAR yes 70795499
chr19 6600136 6600151 FOXP1 JASPAR yes 112280613
chr19 6600136 6600157 IRF1 JASPAR yes 70795500
chr19 6600136 6600157 IRF1 JASPAR yes 112280614
chr19 6600137 6600152 FOXP1 JASPAR yes 70795501
chr19 6600137 6600152 FOXP1 JASPAR yes 112280615
chr19 6600140 6600161 IRF1 JASPAR yes 70795502
chr19 6600140 6600161 IRF1 JASPAR yes 112280616
chr19 6600143 6600157 IRF7 JASPAR yes 70795503
chr19 6600143 6600157 IRF7 JASPAR yes 112280617
chr19 6600144 6600159 PRDM1 JASPAR yes 70795504
chr19 6600144 6600159 PRDM1 JASPAR yes 112280618
chr19 6600145 6600157 IRF1 JASPAR yes 70795505
chr19 6600145 6600157 IRF1 JASPAR yes 112280619
chr19 6600176 6600181 ETS2 TRANSFAC yes 70795506
chr19 6600176 6600181 ETS2 TRANSFAC yes 112280620
chr19 6600181 6600193 YY1 JASPAR yes 70795507
chr19 6600181 6600193 YY1 JASPAR yes 112280621
chr19 6600188 6600199 FLI1 JASPAR yes 70795508
chr19 6600188 6600199 FLI1 JASPAR yes 112280622
chr19 6600189 6600199 GABPA JASPAR yes 70795509
chr19 6600189 6600199 GABPA JASPAR yes 112280623
chr19 6600189 6600202 ELF1 JASPAR yes 70795510
chr19 6600189 6600202 ELF1 JASPAR yes 112280624
chr19 6600202 6600220 ESR2 JASPAR yes 70795511
chr19 6600202 6600220 ESR2 JASPAR yes 112280625
chr19 6600204 6600219 ESR2 JASPAR yes 70795512
chr19 6600204 6600219 ESR2 JASPAR yes 112280626
chr19 6600213 6600216 MYB TRANSFAC yes 70795513
chr19 6600213 6600216 MYB TRANSFAC yes 112280627
chr19 6600231 6600247 NFYA JASPAR yes 70795514
chr19 6600231 6600247 NFYA JASPAR yes 112280628
chr19 6600232 6600250 NFYA JASPAR yes 70795515
chr19 6600232 6600250 NFYA JASPAR yes 112280629
chr19 6600233 6600236 MYB TRANSFAC yes 70795516
chr19 6600233 6600236 MYB TRANSFAC yes 112280630
chr19 6600236 6600240 H1TF2 TRANSFAC yes 70795517
chr19 6600236 6600240 NFE TRANSFAC yes 70795518
chr19 6600236 6600240 SRF TRANSFAC yes 70795519
chr19 6600236 6600240 H1TF2 TRANSFAC yes 112280631
chr19 6600236 6600240 NFE TRANSFAC yes 112280632
chr19 6600236 6600240 SRF TRANSFAC yes 112280633
chr19 6600239 6600254 LEF1 JASPAR yes 70795520
chr19 6600239 6600254 LEF1 JASPAR yes 112280634
chr19 6600240 6600254 PLAG1 JASPAR yes 70795521
chr19 6600240 6600254 PLAG1 JASPAR yes 112280635
chr19 6600254 6600264 NFATC3 JASPAR yes 70795522
chr19 6600254 6600264 NFATC3 JASPAR yes 112280636
chr19 6600256 6600263 NFATC2 JASPAR yes 70795523
chr19 6600256 6600263 NFATC2 JASPAR yes 112280637
chr19 6600260 6600274 SPI1 JASPAR yes 70795524
chr19 6600260 6600274 SPI1 JASPAR yes 112280638
chr19 6600264 6600271 SPIB JASPAR yes 70795525
chr19 6600264 6600271 SPIB JASPAR yes 112280639
chr19 6600267 6600285 IRF2 JASPAR yes 70795526
chr19 6600267 6600285 IRF2 JASPAR yes 112280640
chr19 6600275 6600278 MYB TRANSFAC yes 70795527
chr19 6600275 6600278 MYB TRANSFAC yes 112280641
chr19 6600281 6600287 TBP TRANSFAC yes 70795528
chr19 6600281 6600287 TBP TRANSFAC yes 112280642
chr19 6600282 6600296 ONECUT1 JASPAR yes 70795529
chr19 6600282 6600296 ONECUT2 JASPAR yes 70795530
chr19 6600282 6600296 ONECUT3 JASPAR yes 70795531
chr19 6600282 6600296 ONECUT1 JASPAR yes 112280643
chr19 6600282 6600296 ONECUT2 JASPAR yes 112280644
chr19 6600282 6600296 ONECUT3 JASPAR yes 112280645
chr19 6600289 6600295 GATA1 TRANSFAC yes 70795532
chr19 6600289 6600295 GATA1 TRANSFAC yes 112280646
chr19 6600289 6600297 GATA5 JASPAR yes 70795533
chr19 6600289 6600297 GATA5 JASPAR yes 112280647
SNP sites on vista28450[chr19:6600003-6600291]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 6600013 rs546003014 G A
NFE NFKB1 NFKB2 ZNF410
5415854
chr19 6600133 rs529603661 AT A
EN2 ESX1 FOXP1 GATA3 GBX1 GBX2 GSX2 HESX1 IRF1 LBX2 LHX2 MEF2C MIXL1 RAX TBP
5415855
chr19 6600272 rs527954576 C T
IRF2 SPI1
5415856
chr19 6600287 rs77971773 A G
ONECUT1 ONECUT2 ONECUT3 TBP
5415857
Genes possibly regulated by vista28450[chr19:6600003-6600291]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 6494330 6502859 - TUBB4A ENSG00000104833.6 6502859 0.97 1.0 16892 2856
chr19 6531010 6535931 + TNFSF9 ENSG00000125657.3 6531010 0.91 1.0 16893 31007
chr19 6583194 6604114 - CD70 ENSG00000125726.6 6604114 1.0 0.95 16894 96177
chr19 6663148 6670599 - TNFSF14 ENSG00000125735.6 6670599 0.95 0.94 16895 29692
Expression level of Genes
Back to top
miRNAs possibly regulated by vista28450[chr19:6600003-6600291]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results