EnhancerDB
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  3. vista28456[chr19:6674780-6675150]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28456[chr19:6674780-6675150]
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Tissue distribution of vista28456
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Transcription factor that possibly regulate vista28456[chr19:6674780-6675150]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 6674733 6675364 CTCF UCSC Txn Factor no Conserved 108379475
chr19 6674850 6675253 RUNX3 UCSC Txn Factor no Conserved 108379533
chr19 6674886 6675217 JUND UCSC Txn Factor no Conserved 108379557
chr19 6674890 6675210 BACH1 UCSC Txn Factor no Conserved 108379558
chr19 6674915 6675267 NFIC UCSC Txn Factor no Conserved 108379565
chr19 6674919 6675217 MTA3 UCSC Txn Factor no Conserved 108379570
chr19 6674926 6675202 MAFF UCSC Txn Factor no Conserved 108379573
chr19 6674930 6675246 EBF1 UCSC Txn Factor no Conserved 108379578
chr19 6674931 6675194 MAFK UCSC Txn Factor no Conserved 108379580
chr19 6674954 6675138 EGR1 UCSC Txn Factor no Conserved 108379594
chr19 6674983 6675189 BATF UCSC Txn Factor no Conserved 108379606
chr19 6675093 6675393 ZEB1 UCSC Txn Factor no Conserved 108379620
chr19 6674830 6674844 CREB3L1 JASPAR yes 70795735
chr19 6674885 6674895 SP1 JASPAR yes 70795736
chr19 6674890 6674896 MZF1 JASPAR yes 70795737
chr19 6674903 6674924 ZNF263 JASPAR yes 70795738
chr19 6674919 6674939 PPARG JASPAR yes 70795739
chr19 6674933 6674943 SP1 JASPAR yes 70795740
chr19 6674985 6674991 MZF1 JASPAR yes 70795741
chr19 6674997 6675005 MEIS2 JASPAR yes 70795742
chr19 6674997 6675005 MEIS3 JASPAR yes 70795743
chr19 6674998 6675002 NFE TRANSFAC yes 70795744
chr19 6675009 6675024 AR JASPAR yes 70795745
chr19 6675009 6675026 NR3C1 JASPAR yes 70795746
chr19 6675009 6675026 NR3C2 JASPAR yes 70795747
chr19 6675011 6675026 AR JASPAR yes 70795748
chr19 6675014 6675020 SOX10 JASPAR yes 70795749
chr19 6675025 6675037 GLI2 JASPAR yes 70795750
chr19 6675025 6675040 RUNX2 JASPAR yes 70795751
chr19 6675026 6675036 RUNX3 JASPAR yes 70795752
chr19 6675029 6675049 RREB1 JASPAR yes 70795753
chr19 6675031 6675037 SOX10 JASPAR yes 70795754
chr19 6675043 6675054 E2F6 JASPAR yes 70795755
chr19 6675052 6675070 MAFF JASPAR yes 70795756
chr19 6675054 6675057 MYB TRANSFAC yes 70795757
chr19 6675054 6675065 NRL JASPAR yes 70795758
chr19 6675054 6675069 MAFK JASPAR yes 70795759
chr19 6675054 6675075 MAFG JASPAR yes 70795760
chr19 6675055 6675069 JUN JASPAR yes 70795761
chr19 6675058 6675069 FOSL2 JASPAR yes 70795762
chr19 6675058 6675069 JUNB JASPAR yes 70795763
chr19 6675058 6675069 NFE2L2 JASPAR yes 70795764
chr19 6675059 6675070 FOS JASPAR yes 70795765
chr19 6675059 6675070 FOSL1 JASPAR yes 70795766
chr19 6675059 6675070 JUND JASPAR yes 70795767
chr19 6675059 6675070 NFE2 JASPAR yes 70795768
chr19 6675060 6675069 JDP2 JASPAR yes 70795769
chr19 6675060 6675071 FOSL2 JASPAR yes 70795770
chr19 6675060 6675071 JUNB JASPAR yes 70795771
chr19 6675060 6675074 JUN JASPAR yes 70795772
chr19 6675061 6675072 BATF JASPAR yes 70795773
chr19 6675070 6675091 ZNF263 JASPAR yes 70795774
chr19 6675071 6675081 MZF1 JASPAR yes 70795775
chr19 6675072 6675091 REST JASPAR yes 70795776
chr19 6675074 6675080 SP1 TRANSFAC yes 70795777
chr19 6675077 6675092 TFAP2C JASPAR yes 70795778
chr19 6675078 6675089 EBF1 JASPAR yes 70795779
chr19 6675078 6675089 TFAP2A JASPAR yes 70795780
chr19 6675078 6675089 TFAP2B JASPAR yes 70795781
chr19 6675078 6675089 TFAP2C JASPAR yes 70795782
chr19 6675079 6675088 TFAP2A JASPAR yes 70795783
chr19 6675090 6675100 ELK1 JASPAR yes 70795784
chr19 6675091 6675102 ETV2 JASPAR yes 70795785
chr19 6675092 6675102 ETS1 JASPAR yes 70795786
chr19 6675092 6675102 ETV1 JASPAR yes 70795787
chr19 6675092 6675102 ETV4 JASPAR yes 70795788
chr19 6675092 6675102 FLI1 JASPAR yes 70795789
chr19 6675092 6675103 ELK4 JASPAR yes 70795790
chr19 6675094 6675100 ETS1 JASPAR yes 70795791
chr19 6675107 6675120 SMAD2 JASPAR yes 70795792
SNP sites on vista28456[chr19:6674780-6675150]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 6674948 rs115171475 G A
BACH1 CTCF EBF1 JUND MAFF MAFK MTA3 NFIC RUNX3
5416715
chr19 6674973 rs143399699 C T
BACH1 CTCF EBF1 EGR1 JUND MAFF MAFK MTA3 NFIC RUNX3
5416716
chr19 6674974 rs558720002 C G
BACH1 CTCF EBF1 EGR1 JUND MAFF MAFK MTA3 NFIC RUNX3
5416717
chr19 6675025 rs1862510 C T
AR BACH1 BATF CTCF EBF1 EGR1 GLI2 JUND MAFF MAFK MTA3 NFIC NR3C1 NR3C2 RUNX2 RUNX3
5416718
Genes possibly regulated by vista28456[chr19:6674780-6675150]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 6583194 6604114 - CD70 ENSG00000125726.6 6604114 1.0 0.95 16894 29334
chr19 6663148 6670599 - TNFSF14 ENSG00000125735.6 6670599 0.95 0.94 16895 95819
chr19 6677715 6730573 - C3 ENSG00000125730.12 6730573 0.98 0.96 16896 44577
chr19 6729925 6737614 - GPR108 ENSG00000125734.9 6737614 0.57 1.0 16897 37536
chr19 6737936 6751537 + TRIP10 ENSG00000125733.13 6737936 0.72 1.0 16898 37214
chr19 6752171 6767599 - SH2D3A ENSG00000125731.8 6767599 0.7 1.0 16899 7551
chr19 6772725 6857377 + VAV1 ENSG00000141968.3 6772725 0.9 1.0 16900 2425
Expression level of Genes
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miRNAs possibly regulated by vista28456[chr19:6674780-6675150]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr19 6736723 6736743 - hsa-miR-6791-3p MIMAT0027483 6737590 0.1562748102878455 0.0 0.0 809
Expression level of miRNAs
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