EnhancerDB
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  3. vista28461[chr19:6801116-6801467]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28461[chr19:6801116-6801467]
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Tissue distribution of vista28461
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Transcription factor that possibly regulate vista28461[chr19:6801116-6801467]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 6801008 6801412 EP300 UCSC Txn Factor no Conserved 108380159
chr19 6801099 6801353 FOSL2 UCSC Txn Factor no Conserved 108380170
chr19 6801247 6803432 POLR2A UCSC Txn Factor no Conserved 108380191
chr19 6801247 6803432 POLR2A UCSC Txn Factor no Conserved 108380192
chr19 6801247 6803432 POLR2A UCSC Txn Factor no Conserved 108380193
chr19 6801117 6801128 NFIL3 JASPAR yes 70796007
chr19 6801117 6801128 NFIL3 JASPAR yes 112291554
chr19 6801118 6801130 DBP JASPAR yes 70796008
chr19 6801118 6801130 HLF JASPAR yes 70796009
chr19 6801118 6801130 TEF JASPAR yes 70796010
chr19 6801118 6801130 DBP JASPAR yes 112291555
chr19 6801118 6801130 HLF JASPAR yes 112291556
chr19 6801118 6801130 TEF JASPAR yes 112291557
chr19 6801134 6801143 THAP1 JASPAR yes 70796011
chr19 6801134 6801143 THAP1 JASPAR yes 112291558
chr19 6801137 6801141 LFA1 TRANSFAC yes 70796012
chr19 6801137 6801141 LFA1 TRANSFAC yes 112291559
chr19 6801148 6801159 FOXA1 JASPAR yes 70796013
chr19 6801148 6801159 FOXA1 JASPAR yes 112291560
chr19 6801164 6801168 YY1 TRANSFAC yes 70796014
chr19 6801164 6801168 YY1 TRANSFAC yes 112291561
chr19 6801180 6801186 NFIC JASPAR yes 70796015
chr19 6801180 6801186 NFIC JASPAR yes 112291562
chr19 6801193 6801203 TEAD1 JASPAR yes 70796016
chr19 6801193 6801203 TEAD4 JASPAR yes 70796017
chr19 6801193 6801203 TEAD1 JASPAR yes 112291563
chr19 6801193 6801203 TEAD4 JASPAR yes 112291564
chr19 6801193 6801204 FOXH1 JASPAR yes 70796018
chr19 6801193 6801204 FOXH1 JASPAR yes 112291565
chr19 6801193 6801205 TEAD1 JASPAR yes 70796019
chr19 6801193 6801205 TEAD1 JASPAR yes 112291566
chr19 6801194 6801202 TEAD3 JASPAR yes 70796020
chr19 6801194 6801202 TEAD3 JASPAR yes 112291567
chr19 6801213 6801230 PAX1 JASPAR yes 70796021
chr19 6801213 6801230 PAX9 JASPAR yes 70796022
chr19 6801213 6801230 PAX1 JASPAR yes 112291568
chr19 6801213 6801230 PAX9 JASPAR yes 112291569
chr19 6801215 6801229 PAX6 JASPAR yes 70796023
chr19 6801215 6801229 PAX6 JASPAR yes 112291570
chr19 6801217 6801231 PAX6 JASPAR yes 70796024
chr19 6801217 6801231 PAX6 JASPAR yes 112291571
chr19 6801245 6801258 EOMES JASPAR yes 70796025
chr19 6801245 6801258 EOMES JASPAR yes 112291572
chr19 6801247 6801257 TBR1 JASPAR yes 70796026
chr19 6801247 6801257 TBR1 JASPAR yes 112291573
chr19 6801247 6801258 TBX2 JASPAR yes 70796027
chr19 6801247 6801258 TBX2 JASPAR yes 112291574
chr19 6801249 6801257 MGA JASPAR yes 70796028
chr19 6801249 6801257 MGA JASPAR yes 112291575
chr19 6801268 6801282 RORA JASPAR yes 70796029
chr19 6801268 6801282 RORA JASPAR yes 112291576
chr19 6801274 6801280 ESR1 TRANSFAC yes 70796030
chr19 6801274 6801280 ESR1 TRANSFAC yes 112291577
chr19 6801276 6801280 ESR1 TRANSFAC yes 70796031
chr19 6801276 6801280 ESR1 TRANSFAC yes 112291578
chr19 6801281 6801294 POU2F2 JASPAR yes 70796032
chr19 6801281 6801294 POU2F2 JASPAR yes 112291579
chr19 6801283 6801287 YY1 TRANSFAC yes 70796033
chr19 6801283 6801287 YY1 TRANSFAC yes 112291580
chr19 6801300 6801314 JUN JASPAR yes 70796034
chr19 6801300 6801314 JUN JASPAR yes 112291581
chr19 6801302 6801313 BATF JASPAR yes 70796035
chr19 6801302 6801313 BATF JASPAR yes 112291582
chr19 6801303 6801314 JUNB JASPAR yes 70796036
chr19 6801303 6801314 JUNB JASPAR yes 112291583
chr19 6801304 6801315 FOS JASPAR yes 70796037
chr19 6801304 6801315 FOSL1 JASPAR yes 70796038
chr19 6801304 6801315 NFE2 JASPAR yes 70796039
chr19 6801304 6801315 FOS JASPAR yes 112291584
chr19 6801304 6801315 FOSL1 JASPAR yes 112291585
chr19 6801304 6801315 NFE2 JASPAR yes 112291586
chr19 6801305 6801314 JDP2 JASPAR yes 70796040
chr19 6801305 6801314 JDP2 JASPAR yes 112291587
chr19 6801310 6801323 DUXA JASPAR yes 70796041
chr19 6801310 6801323 DUXA JASPAR yes 112291588
chr19 6801311 6801322 DUX4 JASPAR yes 70796042
chr19 6801311 6801322 DUX4 JASPAR yes 112291589
chr19 6801313 6801318 MYB TRANSFAC yes 70796043
chr19 6801313 6801318 MYB TRANSFAC yes 112291590
chr19 6801315 6801321 JUN TRANSFAC yes 70796044
chr19 6801315 6801321 JUN TRANSFAC yes 112291591
chr19 6801323 6801329 ETS1 JASPAR yes 70796045
chr19 6801323 6801329 ETS1 JASPAR yes 112291592
chr19 6801330 6801345 JUND JASPAR yes 70796046
chr19 6801330 6801345 JUND JASPAR yes 112291593
chr19 6801331 6801344 JUN JASPAR yes 70796047
chr19 6801331 6801344 JUN JASPAR yes 112291594
chr19 6801334 6801342 RHOXF1 JASPAR yes 70796048
chr19 6801334 6801342 RHOXF1 JASPAR yes 112291595
chr19 6801364 6801383 REST JASPAR yes 70796049
chr19 6801364 6801383 REST JASPAR yes 112291596
chr19 6801381 6801391 TFCP2 JASPAR yes 70796050
chr19 6801381 6801391 TFCP2 JASPAR yes 112291597
chr19 6801381 6801401 ESR1 JASPAR yes 70796051
chr19 6801381 6801401 ESR1 JASPAR yes 112291598
chr19 6801385 6801403 ESR2 JASPAR yes 70796052
chr19 6801385 6801403 ESR2 JASPAR yes 112291599
chr19 6801386 6801401 ESR2 JASPAR yes 70796053
chr19 6801386 6801401 ESR2 JASPAR yes 112291600
chr19 6801396 6801417 REST JASPAR yes 70796054
chr19 6801396 6801417 REST JASPAR yes 112291601
chr19 6801419 6801439 RREB1 JASPAR yes 70796055
chr19 6801419 6801439 RREB1 JASPAR yes 112291602
chr19 6801432 6801453 ZNF263 JASPAR yes 70796056
chr19 6801432 6801453 ZNF263 JASPAR yes 112291603
chr19 6801434 6801451 ZNF410 JASPAR yes 70796057
chr19 6801434 6801451 ZNF410 JASPAR yes 112291604
chr19 6801441 6801462 ZNF263 JASPAR yes 70796058
chr19 6801441 6801462 ZNF263 JASPAR yes 112291605
chr19 6801442 6801452 SP1 JASPAR yes 70796059
chr19 6801442 6801452 SP1 JASPAR yes 112291606
chr19 6801442 6801463 ZNF263 JASPAR yes 70796060
chr19 6801442 6801463 ZNF263 JASPAR yes 112291607
chr19 6801449 6801453 LFA1 TRANSFAC yes 70796061
chr19 6801449 6801453 LFA1 TRANSFAC yes 112291608
SNP sites on vista28461[chr19:6801116-6801467]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 6801129 rs549978086 G A
DBP EP300 FOSL2 HLF TEF
5417856
chr19 6801135 rs147489942 T G
EP300 FOSL2 THAP1
5417857
chr19 6801231 rs140010576 G A,T
EP300 FOSL2 PAX6
5417858
chr19 6801277 rs142916472 G A
EP300 ESR1 FOSL2 POLR2A RORA
5417859
chr19 6801278 rs75887324 G T
EP300 ESR1 FOSL2 POLR2A RORA
5417860
chr19 6801465 rs59248208 G A
POLR2A
5417861
Genes possibly regulated by vista28461[chr19:6801116-6801467]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 6677715 6730573 - C3 ENSG00000125730.12 6730573 0.98 0.96 16896 29457
chr19 6729925 6737614 - GPR108 ENSG00000125734.9 6737614 0.57 1.0 16897 36498
chr19 6737936 6751537 + TRIP10 ENSG00000125733.13 6737936 0.72 1.0 16898 36820
chr19 6752171 6767599 - SH2D3A ENSG00000125731.8 6767599 0.7 1.0 16899 66483
chr19 6772725 6857377 + VAV1 ENSG00000141968.3 6772725 0.9 1.0 16900 71609
chr19 6887577 6940470 + EMR1 ENSG00000174837.10 6887577 0.96 0.95 16901 13890
Expression level of Genes
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miRNAs possibly regulated by vista28461[chr19:6801116-6801467]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results