EnhancerDB
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  3. vista28462[chr19:6802447-6802718]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28462[chr19:6802447-6802718]
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Tissue distribution of vista28462
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Transcription factor that possibly regulate vista28462[chr19:6802447-6802718]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 6801247 6803432 POLR2A UCSC Txn Factor no Conserved 108380191
chr19 6801247 6803432 POLR2A UCSC Txn Factor no Conserved 108380192
chr19 6801247 6803432 POLR2A UCSC Txn Factor no Conserved 108380193
chr19 6802369 6802746 RUNX3 UCSC Txn Factor no Conserved 108380345
chr19 6802490 6802850 CTCF UCSC Txn Factor no Conserved 108380377
chr19 6802499 6802815 EBF1 UCSC Txn Factor no Conserved 108380380
chr19 6802526 6802731 SPI1 UCSC Txn Factor no Conserved 108380386
chr19 6802458 6802462 NFE TRANSFAC yes 70796062
chr19 6802458 6802462 NFE TRANSFAC yes 112291801
chr19 6802506 6802520 JUN JASPAR yes 70796063
chr19 6802506 6802520 JUN JASPAR yes 112291802
chr19 6802508 6802519 BATF JASPAR yes 70796064
chr19 6802508 6802519 BATF JASPAR yes 112291803
chr19 6802510 6802521 FOS JASPAR yes 70796065
chr19 6802510 6802521 FOSL1 JASPAR yes 70796066
chr19 6802510 6802521 JUND JASPAR yes 70796067
chr19 6802510 6802521 NFE2 JASPAR yes 70796068
chr19 6802510 6802521 FOS JASPAR yes 112291804
chr19 6802510 6802521 FOSL1 JASPAR yes 112291805
chr19 6802510 6802521 JUND JASPAR yes 112291806
chr19 6802510 6802521 NFE2 JASPAR yes 112291807
chr19 6802511 6802519 JUND TRANSFAC yes 70796069
chr19 6802511 6802519 JUND TRANSFAC yes 112291808
chr19 6802511 6802520 JDP2 JASPAR yes 70796070
chr19 6802511 6802520 JDP2 JASPAR yes 112291809
chr19 6802511 6802522 FOSL2 JASPAR yes 70796071
chr19 6802511 6802522 FOSL2 JASPAR yes 112291810
chr19 6802511 6802525 JUN JASPAR yes 70796072
chr19 6802511 6802525 JUN JASPAR yes 112291811
chr19 6802512 6802518 JUN TRANSFAC yes 70796073
chr19 6802512 6802518 JUN TRANSFAC yes 112291812
chr19 6802521 6802535 PLAG1 JASPAR yes 70796074
chr19 6802521 6802535 PLAG1 JASPAR yes 112291813
chr19 6802521 6802536 NR2C2 JASPAR yes 70796075
chr19 6802521 6802536 NR2C2 JASPAR yes 112291814
chr19 6802522 6802537 PRDM1 JASPAR yes 70796076
chr19 6802522 6802537 PRDM1 JASPAR yes 112291815
chr19 6802523 6802533 SP1 JASPAR yes 70796077
chr19 6802523 6802533 SP1 JASPAR yes 112291816
chr19 6802542 6802553 USF1 JASPAR yes 70796078
chr19 6802542 6802553 USF2 JASPAR yes 70796079
chr19 6802542 6802553 USF1 JASPAR yes 112291817
chr19 6802542 6802553 USF2 JASPAR yes 112291818
chr19 6802543 6802553 SREBF2 JASPAR yes 70796080
chr19 6802543 6802553 TFE3 JASPAR yes 70796081
chr19 6802543 6802553 TFEB JASPAR yes 70796082
chr19 6802543 6802553 TFEC JASPAR yes 70796083
chr19 6802543 6802553 SREBF2 JASPAR yes 112291819
chr19 6802543 6802553 TFE3 JASPAR yes 112291820
chr19 6802543 6802553 TFEB JASPAR yes 112291821
chr19 6802543 6802553 TFEC JASPAR yes 112291822
chr19 6802543 6802554 USF1 JASPAR yes 70796084
chr19 6802543 6802554 USF1 JASPAR yes 112291823
chr19 6802556 6802561 ETS2 TRANSFAC yes 70796085
chr19 6802556 6802561 ETS2 TRANSFAC yes 112291824
chr19 6802563 6802567 NFE TRANSFAC yes 70796086
chr19 6802563 6802567 NFE TRANSFAC yes 112291825
chr19 6802574 6802584 TFAP4 JASPAR yes 70796087
chr19 6802574 6802584 TFAP4 JASPAR yes 112291826
chr19 6802582 6802597 TFAP2A JASPAR yes 70796088
chr19 6802582 6802597 TFAP2A JASPAR yes 112291827
chr19 6802588 6802601 NR2F1 JASPAR yes 70796089
chr19 6802588 6802601 NR2F1 JASPAR yes 112291828
chr19 6802589 6802597 CREB1 JASPAR yes 70796090
chr19 6802589 6802597 CREB1 JASPAR yes 112291829
chr19 6802589 6802604 NR2C2 JASPAR yes 70796091
chr19 6802589 6802604 NR2C2 JASPAR yes 112291830
chr19 6802592 6802596 ESR1 TRANSFAC yes 70796092
chr19 6802592 6802596 ESR1 TRANSFAC yes 112291831
chr19 6802596 6802607 E2F6 JASPAR yes 70796093
chr19 6802596 6802607 E2F6 JASPAR yes 112291832
chr19 6802600 6802610 NFKB1 JASPAR yes 70796094
chr19 6802600 6802610 REL JASPAR yes 70796095
chr19 6802600 6802610 NFKB1 JASPAR yes 112291833
chr19 6802600 6802610 REL JASPAR yes 112291834
chr19 6802603 6802613 ETV6 JASPAR yes 70796096
chr19 6802603 6802613 ETV6 JASPAR yes 112291835
chr19 6802603 6802616 ELF1 JASPAR yes 70796097
chr19 6802603 6802616 ELF1 JASPAR yes 112291836
chr19 6802604 6802611 SPI1 JASPAR yes 70796098
chr19 6802604 6802611 SPI1 JASPAR yes 112291837
chr19 6802604 6802612 EHF JASPAR yes 70796099
chr19 6802604 6802612 EHF JASPAR yes 112291838
chr19 6802628 6802640 TAL1 JASPAR yes 70796100
chr19 6802628 6802640 TAL1 JASPAR yes 112291839
chr19 6802630 6802636 YY1 JASPAR yes 70796101
chr19 6802630 6802636 YY1 JASPAR yes 112291840
chr19 6802674 6802684 POU6F2 JASPAR yes 70796102
chr19 6802674 6802684 POU6F2 JASPAR yes 112291841
chr19 6802678 6802682 YY1 TRANSFAC yes 70796103
chr19 6802678 6802682 YY1 TRANSFAC yes 112291842
chr19 6802718 6802732 TCF7L2 JASPAR yes 70796104
chr19 6802718 6802732 TCF7L2 JASPAR yes 112291843
SNP sites on vista28462[chr19:6802447-6802718]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 6802571 rs8106212 C T
CTCF EBF1 POLR2A RUNX3 SPI1
5417884
chr19 6802581 rs2617823 T C
CTCF EBF1 POLR2A RUNX3 SPI1 TFAP4
5417885
chr19 6802585 rs118146369 C T
CTCF EBF1 POLR2A RUNX3 SPI1 TFAP2A
5417886
chr19 6802616 rs2617824 C T
CTCF EBF1 ELF1 POLR2A RUNX3 SPI1
5417887
chr19 6802700 rs187344031 G A
CTCF EBF1 POLR2A RUNX3 SPI1
5417888
Genes possibly regulated by vista28462[chr19:6802447-6802718]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 6677715 6730573 - C3 ENSG00000125730.12 6730573 0.98 0.96 16896 28126
chr19 6729925 6737614 - GPR108 ENSG00000125734.9 6737614 0.57 1.0 16897 35167
chr19 6737936 6751537 + TRIP10 ENSG00000125733.13 6737936 0.72 1.0 16898 35489
chr19 6752171 6767599 - SH2D3A ENSG00000125731.8 6767599 0.7 1.0 16899 65152
chr19 6772725 6857377 + VAV1 ENSG00000141968.3 6772725 0.9 1.0 16900 70278
chr19 6887577 6940470 + EMR1 ENSG00000174837.10 6887577 0.96 0.95 16901 15141
Expression level of Genes
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miRNAs possibly regulated by vista28462[chr19:6802447-6802718]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results