EnhancerDB
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  3. vista28470[chr19:7402747-7403030]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28470[chr19:7402747-7403030]
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Tissue distribution of vista28470
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Transcription factor that possibly regulate vista28470[chr19:7402747-7403030]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 7402499 7403057 RUNX3 UCSC Txn Factor no Conserved 108380963
chr19 7402536 7403085 NFIC UCSC Txn Factor no Conserved 108380965
chr19 7402587 7403056 ATF2 UCSC Txn Factor no Conserved 108380973
chr19 7402622 7403021 FOXM1 UCSC Txn Factor no Conserved 108380981
chr19 7402654 7402841 BATF UCSC Txn Factor no Conserved 108380991
chr19 7402654 7403082 EBF1 UCSC Txn Factor no Conserved 108380993
chr19 7402687 7402947 MEF2A UCSC Txn Factor no Conserved 108380998
chr19 7402763 7402773 POU6F2 JASPAR yes 70796509
chr19 7402763 7402773 POU6F2 JASPAR yes 112318461
chr19 7402767 7402771 YY1 TRANSFAC yes 70796510
chr19 7402767 7402771 YY1 TRANSFAC yes 112318462
chr19 7402770 7402783 HSF1 JASPAR yes 70796511
chr19 7402770 7402783 HSF2 JASPAR yes 70796512
chr19 7402770 7402783 HSF4 JASPAR yes 70796513
chr19 7402770 7402783 HSF1 JASPAR yes 112318463
chr19 7402770 7402783 HSF2 JASPAR yes 112318464
chr19 7402770 7402783 HSF4 JASPAR yes 112318465
chr19 7402790 7402805 MEF2A JASPAR yes 70796514
chr19 7402790 7402805 MEF2A JASPAR yes 112318466
chr19 7402802 7402812 RUNX3 JASPAR yes 70796515
chr19 7402802 7402812 RUNX3 JASPAR yes 112318467
chr19 7402803 7402812 RUNX2 JASPAR yes 70796516
chr19 7402803 7402812 RUNX2 JASPAR yes 112318468
chr19 7402831 7402846 RUNX2 JASPAR yes 70796517
chr19 7402831 7402846 RUNX2 JASPAR yes 112318469
chr19 7402835 7402845 RUNX3 JASPAR yes 70796518
chr19 7402835 7402845 RUNX3 JASPAR yes 112318470
chr19 7402836 7402845 RUNX2 JASPAR yes 70796519
chr19 7402836 7402845 RUNX2 JASPAR yes 112318471
chr19 7402851 7402855 H4TF2 TRANSFAC yes 70796520
chr19 7402851 7402855 H4TF2 TRANSFAC yes 112318472
chr19 7402865 7402886 IRF1 JASPAR yes 70796521
chr19 7402865 7402886 IRF1 JASPAR yes 112318473
chr19 7402867 7402882 IRF9 JASPAR yes 70796522
chr19 7402867 7402882 IRF9 JASPAR yes 112318474
chr19 7402868 7402882 IRF7 JASPAR yes 70796523
chr19 7402868 7402882 IRF8 JASPAR yes 70796524
chr19 7402868 7402882 IRF7 JASPAR yes 112318475
chr19 7402868 7402882 IRF8 JASPAR yes 112318476
chr19 7402869 7402883 STAT1 JASPAR yes 70796525
chr19 7402869 7402883 STAT1 JASPAR yes 112318477
chr19 7402869 7402884 STAT2 JASPAR yes 70796526
chr19 7402869 7402884 STAT2 JASPAR yes 112318478
chr19 7402892 7402898 NFE2 TRANSFAC yes 70796527
chr19 7402892 7402898 NFE2 TRANSFAC yes 112318479
chr19 7402894 7402903 SP1 TRANSFAC yes 70796528
chr19 7402894 7402903 SP1 TRANSFAC yes 112318480
chr19 7402901 7402920 RFX2 JASPAR yes 70796529
chr19 7402901 7402920 RFX2 JASPAR yes 112318481
chr19 7402903 7402918 RFX5 JASPAR yes 70796530
chr19 7402903 7402918 RFX5 JASPAR yes 112318482
chr19 7402905 7402921 RFX2 JASPAR yes 70796531
chr19 7402905 7402921 RFX3 JASPAR yes 70796532
chr19 7402905 7402921 RFX5 JASPAR yes 70796533
chr19 7402905 7402921 RFX2 JASPAR yes 112318483
chr19 7402905 7402921 RFX3 JASPAR yes 112318484
chr19 7402905 7402921 RFX5 JASPAR yes 112318485
chr19 7402916 7402930 SPI1 JASPAR yes 70796534
chr19 7402916 7402930 SPI1 JASPAR yes 112318486
chr19 7402917 7402937 PPARG JASPAR yes 70796535
chr19 7402917 7402937 PPARG JASPAR yes 112318487
chr19 7402920 7402925 TFAP2A TRANSFAC yes 70796536
chr19 7402920 7402925 TFAP2A TRANSFAC yes 112318488
chr19 7402920 7402926 MZF1 JASPAR yes 70796537
chr19 7402920 7402926 MZF1 JASPAR yes 112318489
chr19 7402929 7402943 EBF1 JASPAR yes 70796538
chr19 7402929 7402943 EBF1 JASPAR yes 112318490
chr19 7402931 7402942 EBF1 JASPAR yes 70796539
chr19 7402931 7402942 EBF1 JASPAR yes 112318491
chr19 7402935 7402940 TFAP2A TRANSFAC yes 70796540
chr19 7402935 7402940 TFAP2A TRANSFAC yes 112318492
chr19 7402935 7402941 MZF1 JASPAR yes 70796541
chr19 7402935 7402941 MZF1 JASPAR yes 112318493
chr19 7402949 7402953 NFE TRANSFAC yes 70796542
chr19 7402949 7402953 NFE TRANSFAC yes 112318494
chr19 7402954 7402960 SOX10 JASPAR yes 70796543
chr19 7402954 7402960 SOX10 JASPAR yes 112318495
chr19 7402981 7402985 YY1 TRANSFAC yes 70796544
chr19 7402981 7402985 YY1 TRANSFAC yes 112318496
chr19 7402985 7402988 MYB TRANSFAC yes 70796545
chr19 7402985 7402988 MYB TRANSFAC yes 112318497
chr19 7402989 7402994 GATA2 JASPAR yes 70796546
chr19 7402989 7402994 GATA2 JASPAR yes 112318498
chr19 7402998 7403002 TEAD2 TRANSFAC yes 70796547
chr19 7402998 7403002 TEAD2 TRANSFAC yes 112318499
chr19 7403019 7403023 YY1 TRANSFAC yes 70796548
chr19 7403019 7403023 YY1 TRANSFAC yes 112318500
SNP sites on vista28470[chr19:7402747-7403030]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 7402768 rs139205602 C T
ATF2 BATF EBF1 FOXM1 MEF2A NFIC POU6F2 RUNX3 YY1
5420907
chr19 7402774 rs78302272 G A
ATF2 BATF EBF1 FOXM1 HSF1 HSF2 HSF4 MEF2A NFIC RUNX3
5420908
Genes possibly regulated by vista28470[chr19:7402747-7403030]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 7413848 7448271 + CTB-133G6.1 ENSG00000263264.1 7413848 0.96 0.98 16909 89182
chr19 7445850 7535131 + CTD-2207O23.3 ENSG00000268861.1 7445850 0.97 0.98 16910 57180
chr19 7459999 7537363 + ARHGEF18 ENSG00000104880.13 7459999 0.74 0.99 16911 43031
Expression level of Genes
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miRNAs possibly regulated by vista28470[chr19:7402747-7403030]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results