EnhancerDB
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  3. vista28476[chr19:7445572-7445841]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28476[chr19:7445572-7445841]
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Tissue distribution of vista28476
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Transcription factor that possibly regulate vista28476[chr19:7445572-7445841]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 7445456 7446084 CTCF UCSC Txn Factor no Conserved 108381091
chr19 7445499 7445767 RAD21 UCSC Txn Factor no Conserved 108381100
chr19 7445572 7445578 TBP TRANSFAC yes 70796768
chr19 7445574 7445589 FOXP1 JASPAR yes 70796769
chr19 7445589 7445602 ELF1 JASPAR yes 70796770
chr19 7445599 7445614 SOX21 JASPAR yes 70796771
chr19 7445599 7445615 SOX4 JASPAR yes 70796772
chr19 7445607 7445613 TCF4 TRANSFAC yes 70796773
chr19 7445607 7445622 FOXP1 JASPAR yes 70796774
chr19 7445610 7445618 FOXO3 JASPAR yes 70796775
chr19 7445625 7445629 YY1 TRANSFAC yes 70796776
chr19 7445628 7445647 CTCF JASPAR yes 70796777
chr19 7445637 7445648 STAT3 JASPAR yes 70796778
chr19 7445641 7445648 NFATC2 JASPAR yes 70796779
chr19 7445644 7445656 GRHL1 JASPAR yes 70796780
chr19 7445648 7445656 MEIS2 JASPAR yes 70796781
chr19 7445648 7445656 MEIS3 JASPAR yes 70796782
chr19 7445649 7445653 NFE TRANSFAC yes 70796783
chr19 7445657 7445666 JDP2 JASPAR yes 70796784
chr19 7445682 7445693 ESRRA JASPAR yes 70796785
chr19 7445687 7445696 SNAI2 JASPAR yes 70796786
chr19 7445687 7445697 FIGLA JASPAR yes 70796787
chr19 7445687 7445697 TCF4 JASPAR yes 70796788
chr19 7445689 7445698 ZEB1 JASPAR yes 70796789
chr19 7445691 7445696 SP1 TRANSFAC yes 70796790
chr19 7445777 7445782 GATA1 TRANSFAC yes 70796791
chr19 7445781 7445785 NFE TRANSFAC yes 70796792
chr19 7445784 7445799 LEF1 JASPAR yes 70796793
chr19 7445784 7445799 NR2C2 JASPAR yes 70796794
chr19 7445816 7445836 ESR1 JASPAR yes 70796795
chr19 7445820 7445838 ESR2 JASPAR yes 70796796
chr19 7445821 7445836 ESR2 JASPAR yes 70796797
chr19 7445821 7445841 ESR1 JASPAR yes 70796798
SNP sites on vista28476[chr19:7445572-7445841]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 7445589 rs10401596 C A
CTCF ELF1 FOXP1 RAD21
5421511
chr19 7445653 rs141672031 T C
CTCF GRHL1 MEIS2 MEIS3 NFE RAD21
5421512
Genes possibly regulated by vista28476[chr19:7445572-7445841]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 7413848 7448271 + CTB-133G6.1 ENSG00000263264.1 7413848 0.96 0.98 16909 68276
chr19 7445850 7535131 + CTD-2207O23.3 ENSG00000268861.1 7445850 0.97 0.98 16910 99991
chr19 7459999 7537363 + ARHGEF18 ENSG00000104880.13 7459999 0.74 0.99 16911 85842
Expression level of Genes
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miRNAs possibly regulated by vista28476[chr19:7445572-7445841]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results