EnhancerDB
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  3. vista28478[chr19:7456481-7456588]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28478[chr19:7456481-7456588]
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Tissue distribution of vista28478
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Transcription factor that possibly regulate vista28478[chr19:7456481-7456588]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 7456031 7456487 JUND UCSC Txn Factor no Conserved 108381117
chr19 7456031 7456487 JUND UCSC Txn Factor no Conserved 108381118
chr19 7456280 7456624 STAT3 UCSC Txn Factor no Conserved 108381164
chr19 7456280 7456624 STAT3 UCSC Txn Factor no Conserved 108381165
chr19 7456483 7456494 E2F6 JASPAR yes 70796864
chr19 7456484 7456496 E2F8 JASPAR yes 70796865
chr19 7456486 7456494 TBX15 JASPAR yes 70796866
chr19 7456491 7456512 ZNF263 JASPAR yes 70796867
chr19 7456493 7456496 MYB TRANSFAC yes 70796868
chr19 7456497 7456508 FOS JASPAR yes 70796869
chr19 7456498 7456509 FOSL2 JASPAR yes 70796870
chr19 7456498 7456509 JUNB JASPAR yes 70796871
chr19 7456498 7456512 JUN JASPAR yes 70796872
chr19 7456499 7456510 BATF JASPAR yes 70796873
chr19 7456516 7456522 SOX10 JASPAR yes 70796874
chr19 7456529 7456540 ELK4 JASPAR yes 70796875
chr19 7456529 7456540 FLI1 JASPAR yes 70796876
chr19 7456530 7456540 ETV6 JASPAR yes 70796877
chr19 7456530 7456543 ELF1 JASPAR yes 70796878
chr19 7456531 7456538 SPI1 JASPAR yes 70796879
chr19 7456531 7456539 EHF JASPAR yes 70796880
chr19 7456535 7456548 ELF1 JASPAR yes 70796881
chr19 7456536 7456548 EHF JASPAR yes 70796882
chr19 7456536 7456548 ELF1 JASPAR yes 70796883
chr19 7456536 7456548 ELF4 JASPAR yes 70796884
chr19 7456536 7456549 ELF3 JASPAR yes 70796885
chr19 7456537 7456548 ELF5 JASPAR yes 70796886
chr19 7456538 7456545 ETS1 TRANSFAC yes 70796887
chr19 7456538 7456549 ELK4 JASPAR yes 70796888
chr19 7456538 7456549 FLI1 JASPAR yes 70796889
chr19 7456539 7456547 EHF JASPAR yes 70796890
chr19 7456539 7456547 FEV JASPAR yes 70796891
chr19 7456540 7456547 SPI1 JASPAR yes 70796892
chr19 7456559 7456564 GATA2 JASPAR yes 70796893
chr19 7456576 7456582 MYC TRANSFAC yes 70796894
SNP sites on vista28478[chr19:7456481-7456588]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 7456482 rs186871966 C G
JUND STAT3
5421614
chr19 7456503 rs375369623 C A,T
BATF FOS FOSL2 JUN JUNB STAT3 ZNF263
5421615
chr19 7456568 rs146995971 G A
STAT3
5421616
Genes possibly regulated by vista28478[chr19:7456481-7456588]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 7413848 7448271 + CTB-133G6.1 ENSG00000263264.1 7413848 0.96 0.98 16909 57367
chr19 7445850 7535131 + CTD-2207O23.3 ENSG00000268861.1 7445850 0.97 0.98 16910 89369
chr19 7459999 7537363 + ARHGEF18 ENSG00000104880.13 7459999 0.74 0.99 16911 96589
Expression level of Genes
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miRNAs possibly regulated by vista28478[chr19:7456481-7456588]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results