EnhancerDB
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  3. vista28479[chr19:7483723-7483869]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28479[chr19:7483723-7483869]
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Tissue distribution of vista28479
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Transcription factor that possibly regulate vista28479[chr19:7483723-7483869]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 7483721 7483731 RELA JASPAR yes 70796895
chr19 7483721 7483731 RELA JASPAR yes 112326477
chr19 7483724 7483740 RFX4 JASPAR yes 70796896
chr19 7483724 7483740 RFX4 JASPAR yes 112326478
chr19 7483742 7483753 STAT1 JASPAR yes 70796897
chr19 7483742 7483753 STAT1 JASPAR yes 112326479
chr19 7483757 7483762 ETS2 TRANSFAC yes 70796898
chr19 7483757 7483762 ETS2 TRANSFAC yes 112326480
chr19 7483766 7483776 NEUROG2 JASPAR yes 70796899
chr19 7483766 7483776 NEUROG2 JASPAR yes 112326481
chr19 7483778 7483788 FIGLA JASPAR yes 70796900
chr19 7483778 7483788 FIGLA JASPAR yes 112326482
chr19 7483780 7483785 USF2 TRANSFAC yes 70796901
chr19 7483780 7483785 USF2 TRANSFAC yes 112326483
chr19 7483782 7483793 E2F1 JASPAR yes 70796902
chr19 7483782 7483793 E2F1 JASPAR yes 112326484
chr19 7483830 7483834 YY1 TRANSFAC yes 70796903
chr19 7483830 7483834 YY1 TRANSFAC yes 112326485
chr19 7483839 7483852 ZBTB18 JASPAR yes 70796904
chr19 7483839 7483852 ZBTB18 JASPAR yes 112326486
chr19 7483841 7483850 SNAI2 JASPAR yes 70796905
chr19 7483841 7483850 SNAI2 JASPAR yes 112326487
chr19 7483841 7483851 ID4 JASPAR yes 70796906
chr19 7483841 7483851 TCF3 JASPAR yes 70796907
chr19 7483841 7483851 TCF4 JASPAR yes 70796908
chr19 7483841 7483851 ID4 JASPAR yes 112326488
chr19 7483841 7483851 TCF3 JASPAR yes 112326489
chr19 7483841 7483851 TCF4 JASPAR yes 112326490
chr19 7483842 7483860 ESR1 JASPAR yes 70796909
chr19 7483842 7483860 ESR1 JASPAR yes 112326491
chr19 7483843 7483852 ZEB1 JASPAR yes 70796910
chr19 7483843 7483852 ZEB1 JASPAR yes 112326492
chr19 7483844 7483852 TBX5 JASPAR yes 70796911
chr19 7483844 7483852 TBX5 JASPAR yes 112326493
chr19 7483862 7483876 GLIS2 JASPAR yes 70796912
chr19 7483862 7483876 GLIS2 JASPAR yes 112326494
chr19 7483863 7483883 RREB1 JASPAR yes 70796913
chr19 7483863 7483883 RREB1 JASPAR yes 112326495
chr19 7483863 7483884 ZNF263 JASPAR yes 70796914
chr19 7483863 7483884 ZNF263 JASPAR yes 112326496
SNP sites on vista28479[chr19:7483723-7483869]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 7483862 rs138117258 A T
GLIS2
5422066
chr19 7483863 rs562187691 G GC
GLIS2 RREB1 ZNF263
5422067
Genes possibly regulated by vista28479[chr19:7483723-7483869]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 7413848 7448271 + CTB-133G6.1 ENSG00000263264.1 7413848 0.96 0.98 16909 30125
chr19 7445850 7535131 + CTD-2207O23.3 ENSG00000268861.1 7445850 0.97 0.98 16910 62127
chr19 7459999 7537363 + ARHGEF18 ENSG00000104880.13 7459999 0.74 0.99 16911 76276
chr19 7541761 7562335 - PEX11G ENSG00000104883.3 7562335 0.8 1.0 16912 21534
chr19 7557862 7573336 + C19orf45 ENSG00000198723.6 7557862 0.78 1.0 16913 26007
chr19 7571938 7584508 + CTD-2207O23.12 ENSG00000267952.1 7571938 0.98 0.99 16914 11931
chr19 7580178 7585912 + ZNF358 ENSG00000198816.5 7580178 0.68 1.0 16915 3691
Expression level of Genes
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miRNAs possibly regulated by vista28479[chr19:7483723-7483869]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results