EnhancerDB
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  3. vista28481[chr19:7547395-7547510]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28481[chr19:7547395-7547510]
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Tissue distribution of vista28481
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Transcription factor that possibly regulate vista28481[chr19:7547395-7547510]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 7547405 7547420 TFAP2C JASPAR yes 70796952
chr19 7547406 7547417 TFAP2A JASPAR yes 70796953
chr19 7547406 7547417 TFAP2B JASPAR yes 70796954
chr19 7547406 7547417 TFAP2C JASPAR yes 70796955
chr19 7547407 7547416 TFAP2A JASPAR yes 70796956
chr19 7547412 7547416 LFA1 TRANSFAC yes 70796957
chr19 7547429 7547438 NF-kappaB TRANSFAC yes 70796958
chr19 7547429 7547439 NFKB1 JASPAR yes 70796959
chr19 7547429 7547439 REL JASPAR yes 70796960
chr19 7547429 7547440 NFKB1 JASPAR yes 70796961
chr19 7547442 7547451 NF-kappaB TRANSFAC yes 70796962
chr19 7547442 7547452 NFKB1 JASPAR yes 70796963
chr19 7547442 7547452 REL JASPAR yes 70796964
chr19 7547442 7547453 NFKB1 JASPAR yes 70796965
chr19 7547454 7547468 EBF1 JASPAR yes 70796966
chr19 7547456 7547467 EBF1 JASPAR yes 70796967
chr19 7547460 7547471 NFKB1 JASPAR yes 70796968
chr19 7547460 7547473 NFKB1 JASPAR yes 70796969
chr19 7547460 7547473 NFKB2 JASPAR yes 70796970
chr19 7547461 7547471 NFKB1 JASPAR yes 70796971
chr19 7547461 7547471 RELA JASPAR yes 70796972
chr19 7547461 7547472 NFKB1 JASPAR yes 70796973
chr19 7547499 7547507 EHF JASPAR yes 70796974
chr19 7547501 7547506 ETS2 TRANSFAC yes 70796975
SNP sites on vista28481[chr19:7547395-7547510]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 7547429 rs78096809 C T
NF-kappaB NFKB1 REL
5422471
Genes possibly regulated by vista28481[chr19:7547395-7547510]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 7459999 7537363 + ARHGEF18 ENSG00000104880.13 7459999 0.74 0.99 16911 12604
chr19 7541761 7562335 - PEX11G ENSG00000104883.3 7562335 0.8 1.0 16912 85175
chr19 7557862 7573336 + C19orf45 ENSG00000198723.6 7557862 0.78 1.0 16913 89648
chr19 7571938 7584508 + CTD-2207O23.12 ENSG00000267952.1 7571938 0.98 0.99 16914 75572
chr19 7580178 7585912 + ZNF358 ENSG00000198816.5 7580178 0.68 1.0 16915 67332
chr19 7587512 7598895 + MCOLN1 ENSG00000090674.11 7587512 0.86 1.0 16916 59998
chr19 7598481 7604945 + CTD-2207O23.10 ENSG00000268614.1 7598481 0.97 0.95 16917 49029
chr19 7598890 7626650 + PNPLA6 ENSG00000032444.11 7598890 0.66 1.0 16918 48620
Expression level of Genes
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miRNAs possibly regulated by vista28481[chr19:7547395-7547510]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results