EnhancerDB
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  3. vista28482[chr19:7547905-7548376]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28482[chr19:7547905-7548376]
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Tissue distribution of vista28482
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Transcription factor that possibly regulate vista28482[chr19:7547905-7548376]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 7547943 7547952 SP1 TRANSFAC yes 70796976
chr19 7547945 7547952 SP1 TRANSFAC yes 70796977
chr19 7547946 7547951 SP1 TRANSFAC yes 70796978
chr19 7547946 7547952 SP1 TRANSFAC yes 70796979
chr19 7547946 7547953 SP1 TRANSFAC yes 70796980
chr19 7547948 7547962 EBF1 JASPAR yes 70796981
chr19 7547949 7547960 EBF1 JASPAR yes 70796982
chr19 7547949 7547963 PLAG1 JASPAR yes 70796983
chr19 7547950 7547961 EBF1 JASPAR yes 70796984
chr19 7547959 7547969 SP1 JASPAR yes 70796985
chr19 7547960 7547970 SP1 JASPAR yes 70796986
chr19 7547960 7547970 SP1 TRANSFAC yes 70796987
chr19 7547961 7547971 SP1 JASPAR yes 70796988
chr19 7547965 7547979 EBF1 JASPAR yes 70796989
chr19 7547966 7547977 EBF1 JASPAR yes 70796990
chr19 7547966 7547980 PLAG1 JASPAR yes 70796991
chr19 7547967 7547978 EBF1 JASPAR yes 70796992
chr19 7547973 7547991 ESR1 JASPAR yes 70796993
chr19 7547975 7547995 ESR1 JASPAR yes 70796994
chr19 7547976 7547984 SP1 TRANSFAC yes 70796995
chr19 7547976 7547986 SP1 JASPAR yes 70796996
chr19 7547977 7547983 SP1 TRANSFAC yes 70796997
chr19 7547977 7547987 SP1 JASPAR yes 70796998
chr19 7547978 7547990 ZBTB7A JASPAR yes 70796999
chr19 7547979 7547984 SP1 TRANSFAC yes 70797000
chr19 7547979 7547991 ZBTB7C JASPAR yes 70797001
chr19 7547979 7547996 ESR1 JASPAR yes 70797002
chr19 7547980 7547995 ESR2 JASPAR yes 70797003
chr19 7547984 7547989 MYC TRANSFAC yes 70797004
chr19 7547991 7547999 SP1 TRANSFAC yes 70797005
chr19 7547991 7548001 SP1 JASPAR yes 70797006
chr19 7547992 7547998 SP1 TRANSFAC yes 70797007
chr19 7547992 7548002 SP1 JASPAR yes 70797008
chr19 7547993 7548000 SP1 TRANSFAC yes 70797009
chr19 7547994 7547999 SP1 TRANSFAC yes 70797010
chr19 7547994 7548000 SP1 TRANSFAC yes 70797011
chr19 7548007 7548016 SP1 TRANSFAC yes 70797012
chr19 7548008 7548014 SP1 TRANSFAC yes 70797013
chr19 7548008 7548018 SP1 JASPAR yes 70797014
chr19 7548009 7548016 SP1 TRANSFAC yes 70797015
chr19 7548010 7548015 SP1 TRANSFAC yes 70797016
chr19 7548010 7548016 SP1 TRANSFAC yes 70797017
chr19 7548010 7548017 SP1 TRANSFAC yes 70797018
chr19 7548013 7548034 ZNF263 JASPAR yes 70797019
chr19 7548016 7548037 ZNF263 JASPAR yes 70797020
chr19 7548026 7548031 GATA2 JASPAR yes 70797021
chr19 7548035 7548047 PKNOX1 JASPAR yes 70797022
chr19 7548043 7548064 ZNF263 JASPAR yes 70797023
chr19 7548050 7548071 ZNF263 JASPAR yes 70797024
chr19 7548051 7548061 MZF1 JASPAR yes 70797025
chr19 7548052 7548073 ZNF263 JASPAR yes 70797026
chr19 7548054 7548060 SP1 TRANSFAC yes 70797027
chr19 7548054 7548064 SP1 JASPAR yes 70797028
chr19 7548068 7548079 STAT3 JASPAR yes 70797029
chr19 7548069 7548085 ZNF143 JASPAR yes 70797030
chr19 7548072 7548079 ETS1 TRANSFAC yes 70797031
chr19 7548082 7548093 E2F4 JASPAR yes 70797032
chr19 7548084 7548094 SP1 JASPAR yes 70797033
chr19 7548085 7548091 SP1 TRANSFAC yes 70797034
chr19 7548085 7548095 SP1 JASPAR yes 70797035
chr19 7548086 7548093 SP1 TRANSFAC yes 70797036
chr19 7548087 7548092 SP1 TRANSFAC yes 70797037
chr19 7548087 7548093 SP1 TRANSFAC yes 70797038
chr19 7548087 7548094 SP1 TRANSFAC yes 70797039
chr19 7548102 7548115 ZBTB18 JASPAR yes 70797040
chr19 7548102 7548117 HSF1 JASPAR yes 70797041
chr19 7548111 7548132 REST JASPAR yes 70797042
chr19 7548145 7548160 TFAP2A JASPAR yes 70797043
chr19 7548148 7548160 TFAP2A JASPAR yes 70797044
chr19 7548148 7548160 TFAP2B JASPAR yes 70797045
chr19 7548148 7548160 TFAP2C JASPAR yes 70797046
chr19 7548150 7548159 TFAP2A JASPAR yes 70797047
chr19 7548200 7548214 TLX1 JASPAR yes 70797048
chr19 7548201 7548215 TLX1 JASPAR yes 70797049
chr19 7548222 7548234 YY1 JASPAR yes 70797050
chr19 7548224 7548235 YY2 JASPAR yes 70797051
chr19 7548225 7548231 YY1 JASPAR yes 70797052
chr19 7548227 7548239 HINFP JASPAR yes 70797053
chr19 7548233 7548241 SP1 TRANSFAC yes 70797054
chr19 7548233 7548243 SP1 JASPAR yes 70797055
chr19 7548234 7548240 SP1 TRANSFAC yes 70797056
chr19 7548234 7548244 SP1 JASPAR yes 70797057
chr19 7548235 7548242 SP1 TRANSFAC yes 70797058
chr19 7548236 7548241 SP1 TRANSFAC yes 70797059
chr19 7548236 7548242 SP1 TRANSFAC yes 70797060
chr19 7548241 7548245 H1TF2 TRANSFAC yes 70797061
chr19 7548241 7548245 NFE TRANSFAC yes 70797062
chr19 7548241 7548245 SRF TRANSFAC yes 70797063
chr19 7548255 7548260 SP1 TRANSFAC yes 70797064
chr19 7548261 7548278 BCL6B JASPAR yes 70797065
chr19 7548262 7548267 H4TF1 TRANSFAC yes 70797066
chr19 7548263 7548271 FEV JASPAR yes 70797067
chr19 7548274 7548288 NR2F1 JASPAR yes 70797068
chr19 7548275 7548285 SP1 JASPAR yes 70797069
chr19 7548282 7548286 H4TF2 TRANSFAC yes 70797070
chr19 7548287 7548297 SMAD3 JASPAR yes 70797071
chr19 7548294 7548305 EBF1 JASPAR yes 70797072
chr19 7548298 7548303 TFAP2A TRANSFAC yes 70797073
chr19 7548298 7548304 MZF1 JASPAR yes 70797074
chr19 7548298 7548308 SP1 JASPAR yes 70797075
chr19 7548300 7548306 MAZ TRANSFAC yes 70797076
chr19 7548305 7548309 LFA1 TRANSFAC yes 70797077
chr19 7548321 7548325 LFA1 TRANSFAC yes 70797078
chr19 7548327 7548333 PEA3 TRANSFAC yes 70797079
chr19 7548342 7548346 TEAD2 TRANSFAC yes 70797080
chr19 7548342 7548347 TBP TRANSFAC yes 70797081
SNP sites on vista28482[chr19:7547905-7548376]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 7547948 rs369639712 C T
EBF1 SP1
5422473
chr19 7547956 rs116567426 T C
EBF1 PLAG1
5422474
chr19 7547957 rs142625845 G T
EBF1 PLAG1
5422475
chr19 7547976 rs144162906 G C
EBF1 ESR1 PLAG1 SP1
5422476
chr19 7547992 rs538599832 ACCCCGCCCCATCGGAG A
ESR1 ESR2 SP1
5422477
chr19 7548008 rs138617474 G GC
SP1
5422478
chr19 7548057 rs112161347 C T
MZF1 SP1 ZNF263
5422479
chr19 7548083 rs570738153 C T
E2F4 ZNF143
5422480
chr19 7548195 rs113651071 C T no 5422481
chr19 7548220 rs35742254 C T no 5422482
chr19 7548300 rs140223257 G GGGGA
EBF1 MAZ MZF1 SP1 TFAP2A
5422483
chr19 7548300 rs376136164 G GGGGA
EBF1 MAZ MZF1 SP1 TFAP2A
5422484
chr19 7548351 rs73921437 G C no 5422485
chr19 7548356 rs112535739 C A no 5422486
Genes possibly regulated by vista28482[chr19:7547905-7548376]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 7459999 7537363 + ARHGEF18 ENSG00000104880.13 7459999 0.74 0.99 16911 12094
chr19 7541761 7562335 - PEX11G ENSG00000104883.3 7562335 0.8 1.0 16912 86041
chr19 7557862 7573336 + C19orf45 ENSG00000198723.6 7557862 0.78 1.0 16913 90514
chr19 7571938 7584508 + CTD-2207O23.12 ENSG00000267952.1 7571938 0.98 0.99 16914 76438
chr19 7580178 7585912 + ZNF358 ENSG00000198816.5 7580178 0.68 1.0 16915 68198
chr19 7587512 7598895 + MCOLN1 ENSG00000090674.11 7587512 0.86 1.0 16916 60864
chr19 7598481 7604945 + CTD-2207O23.10 ENSG00000268614.1 7598481 0.97 0.95 16917 49895
chr19 7598890 7626650 + PNPLA6 ENSG00000032444.11 7598890 0.66 1.0 16918 49486
Expression level of Genes
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miRNAs possibly regulated by vista28482[chr19:7547905-7548376]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results