EnhancerDB
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  3. vista28485[chr19:7588336-7588755]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28485[chr19:7588336-7588755]
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Tissue distribution of vista28485
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Transcription factor that possibly regulate vista28485[chr19:7588336-7588755]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 7588346 7588361 HNF4A JASPAR yes 70797126
chr19 7588347 7588362 HNF4G JASPAR yes 70797127
chr19 7588347 7588362 TFAP2A JASPAR yes 70797128
chr19 7588357 7588363 SOX10 JASPAR yes 70797129
chr19 7588359 7588373 FOXF2 JASPAR yes 70797130
chr19 7588360 7588371 HOXC11 JASPAR yes 70797131
chr19 7588360 7588371 HOXC12 JASPAR yes 70797132
chr19 7588360 7588371 HOXC13 JASPAR yes 70797133
chr19 7588360 7588371 HOXD12 JASPAR yes 70797134
chr19 7588361 7588371 HOXC10 JASPAR yes 70797135
chr19 7588361 7588371 HOXD11 JASPAR yes 70797136
chr19 7588364 7588371 FOXD2 JASPAR yes 70797137
chr19 7588364 7588371 FOXI1 JASPAR yes 70797138
chr19 7588364 7588371 FOXL1 JASPAR yes 70797139
chr19 7588364 7588371 FOXO4 JASPAR yes 70797140
chr19 7588364 7588371 FOXO6 JASPAR yes 70797141
chr19 7588364 7588371 FOXP3 JASPAR yes 70797142
chr19 7588364 7588372 FOXD1 JASPAR yes 70797143
chr19 7588364 7588372 FOXO3 JASPAR yes 70797144
chr19 7588389 7588395 TCF4 TRANSFAC yes 70797145
chr19 7588395 7588401 MAZ TRANSFAC yes 70797146
chr19 7588399 7588404 SP1 TRANSFAC yes 70797147
chr19 7588399 7588406 SP1 TRANSFAC yes 70797148
chr19 7588448 7588452 YY1 TRANSFAC yes 70797149
chr19 7588452 7588457 GATA2 JASPAR yes 70797150
chr19 7588463 7588469 TCF4 TRANSFAC yes 70797151
chr19 7588470 7588484 TLX1 JASPAR yes 70797152
chr19 7588480 7588497 BCL6B JASPAR yes 70797153
chr19 7588501 7588506 SP1 TRANSFAC yes 70797154
chr19 7588505 7588522 BCL6B JASPAR yes 70797155
chr19 7588523 7588537 EBF1 JASPAR yes 70797156
chr19 7588524 7588530 MZF1 JASPAR yes 70797157
chr19 7588524 7588535 EBF1 JASPAR yes 70797158
chr19 7588525 7588536 EBF1 JASPAR yes 70797159
chr19 7588528 7588538 GCM2 JASPAR yes 70797160
chr19 7588529 7588539 ZNF740 JASPAR yes 70797161
chr19 7588532 7588543 TBX2 JASPAR yes 70797162
chr19 7588533 7588541 MGA JASPAR yes 70797163
chr19 7588533 7588541 TBX15 JASPAR yes 70797164
chr19 7588533 7588541 TBX1 JASPAR yes 70797165
chr19 7588533 7588541 TBX4 JASPAR yes 70797166
chr19 7588533 7588541 TBX5 JASPAR yes 70797167
chr19 7588533 7588543 TBR1 JASPAR yes 70797168
chr19 7588533 7588547 PLAG1 JASPAR yes 70797169
chr19 7588537 7588545 MEIS3 JASPAR yes 70797170
chr19 7588553 7588571 ESR1 JASPAR yes 70797171
chr19 7588582 7588587 MYC TRANSFAC yes 70797172
chr19 7588603 7588606 MYB TRANSFAC yes 70797173
chr19 7588604 7588613 VENTX JASPAR yes 70797174
chr19 7588607 7588611 YY1 TRANSFAC yes 70797175
chr19 7588608 7588622 E2F7 JASPAR yes 70797176
chr19 7588613 7588623 NFATC3 JASPAR yes 70797177
chr19 7588615 7588622 NFATC2 JASPAR yes 70797178
chr19 7588619 7588633 FOXF2 JASPAR yes 70797179
chr19 7588619 7588634 FOXP1 JASPAR yes 70797180
chr19 7588620 7588631 FOXA1 JASPAR yes 70797181
chr19 7588620 7588635 FOXA1 JASPAR yes 70797182
chr19 7588620 7588636 SOX8 JASPAR yes 70797183
chr19 7588621 7588633 FOXC2 JASPAR yes 70797184
chr19 7588622 7588633 FOXP2 JASPAR yes 70797185
chr19 7588636 7588651 AR JASPAR yes 70797186
chr19 7588637 7588649 TAL1 JASPAR yes 70797187
chr19 7588639 7588649 MSC JASPAR yes 70797188
chr19 7588648 7588659 FOXA1 JASPAR yes 70797189
chr19 7588660 7588674 GATA2 JASPAR yes 70797190
chr19 7588664 7588672 GATA3 JASPAR yes 70797191
chr19 7588734 7588755 IRF1 JASPAR yes 70797192
chr19 7588736 7588751 STAT2 JASPAR yes 70797193
chr19 7588739 7588754 FOXP1 JASPAR yes 70797194
chr19 7588740 7588755 FOXP1 JASPAR yes 70797195
SNP sites on vista28485[chr19:7588336-7588755]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 7588348 rs555986326 T C
HNF4A HNF4G TFAP2A
5422678
chr19 7588532 rs191774594 G C
EBF1 GCM2 TBX2 ZNF740
5422679
chr19 7588729 rs55753041 G C no 5422680
Genes possibly regulated by vista28485[chr19:7588336-7588755]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 7541761 7562335 - PEX11G ENSG00000104883.3 7562335 0.8 1.0 16912 73999
chr19 7557862 7573336 + C19orf45 ENSG00000198723.6 7557862 0.78 1.0 16913 69526
chr19 7571938 7584508 + CTD-2207O23.12 ENSG00000267952.1 7571938 0.98 0.99 16914 83602
chr19 7580178 7585912 + ZNF358 ENSG00000198816.5 7580178 0.68 1.0 16915 91842
chr19 7587512 7598895 + MCOLN1 ENSG00000090674.11 7587512 0.86 1.0 16916 99176
chr19 7598481 7604945 + CTD-2207O23.10 ENSG00000268614.1 7598481 0.97 0.95 16917 90274
chr19 7598890 7626650 + PNPLA6 ENSG00000032444.11 7598890 0.66 1.0 16918 89865
chr19 7660788 7683190 + CAMSAP3 ENSG00000076826.5 7660788 0.81 1.0 16919 27967
Expression level of Genes
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miRNAs possibly regulated by vista28485[chr19:7588336-7588755]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results