EnhancerDB
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  3. vista28490[chr19:7714356-7714558]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28490[chr19:7714356-7714558]
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Tissue distribution of vista28490
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Transcription factor that possibly regulate vista28490[chr19:7714356-7714558]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 7714345 7714580 EGR1 UCSC Txn Factor no Conserved 108381339
chr19 7714358 7714371 ZBTB18 JASPAR yes 70797389
chr19 7714359 7714371 PKNOX1 JASPAR yes 70797390
chr19 7714359 7714371 PKNOX2 JASPAR yes 70797391
chr19 7714360 7714370 MSC JASPAR yes 70797392
chr19 7714360 7714370 MYF6 JASPAR yes 70797393
chr19 7714360 7714370 NHLH1 JASPAR yes 70797394
chr19 7714360 7714370 TFAP4 JASPAR yes 70797395
chr19 7714365 7714380 FOXP1 JASPAR yes 70797396
chr19 7714368 7714376 FOXO3 JASPAR yes 70797397
chr19 7714368 7714379 FOXA1 JASPAR yes 70797398
chr19 7714393 7714403 SP1 JASPAR yes 70797399
chr19 7714399 7714408 SP1 TRANSFAC yes 70797400
chr19 7714400 7714406 SP1 TRANSFAC yes 70797401
chr19 7714400 7714410 SP1 JASPAR yes 70797402
chr19 7714401 7714408 SP1 TRANSFAC yes 70797403
chr19 7714402 7714407 SP1 TRANSFAC yes 70797404
chr19 7714402 7714408 SP1 TRANSFAC yes 70797405
chr19 7714424 7714434 GSC2 JASPAR yes 70797406
chr19 7714443 7714448 ETS2 TRANSFAC yes 70797407
chr19 7714452 7714456 ESR1 TRANSFAC yes 70797408
chr19 7714459 7714469 GSC2 JASPAR yes 70797409
chr19 7714459 7714469 GSC JASPAR yes 70797410
chr19 7714460 7714469 PITX3 JASPAR yes 70797411
chr19 7714474 7714485 USF1 JASPAR yes 70797412
chr19 7714476 7714489 JUN JASPAR yes 70797413
chr19 7714476 7714489 NR2F1 JASPAR yes 70797414
chr19 7714477 7714491 ATF7 JASPAR yes 70797415
chr19 7714478 7714490 JDP2 JASPAR yes 70797416
chr19 7714478 7714493 JUND JASPAR yes 70797417
chr19 7714479 7714492 JUN JASPAR yes 70797418
chr19 7714479 7714493 RORA JASPAR yes 70797419
chr19 7714480 7714488 CREB1 JASPAR yes 70797420
chr19 7714480 7714490 RORA JASPAR yes 70797421
chr19 7714486 7714490 YY1 TRANSFAC yes 70797422
chr19 7714491 7714498 NKX3-1 JASPAR yes 70797423
chr19 7714491 7714502 PHOX2A JASPAR yes 70797424
chr19 7714491 7714502 PROP1 JASPAR yes 70797425
chr19 7714491 7714507 POU4F2 JASPAR yes 70797426
chr19 7714491 7714507 POU4F3 JASPAR yes 70797427
chr19 7714493 7714508 HNF1A JASPAR yes 70797428
chr19 7714494 7714504 HOXB2 JASPAR yes 70797429
chr19 7714494 7714504 HOXB3 JASPAR yes 70797430
chr19 7714494 7714504 MNX1 JASPAR yes 70797431
chr19 7714494 7714504 POU6F1 JASPAR yes 70797432
chr19 7714495 7714503 LMX1A JASPAR yes 70797433
chr19 7714495 7714503 LMX1B JASPAR yes 70797434
chr19 7714495 7714503 NKX6-1 JASPAR yes 70797435
chr19 7714495 7714503 NKX6-2 JASPAR yes 70797436
chr19 7714495 7714503 VAX1 JASPAR yes 70797437
chr19 7714495 7714503 VAX2 JASPAR yes 70797438
chr19 7714495 7714503 VSX1 JASPAR yes 70797439
chr19 7714495 7714503 VSX2 JASPAR yes 70797440
chr19 7714500 7714504 YY1 TRANSFAC yes 70797441
chr19 7714516 7714520 NFE TRANSFAC yes 70797442
chr19 7714516 7714521 GATA1 TRANSFAC yes 70797443
chr19 7714516 7714522 GATA3 JASPAR yes 70797444
chr19 7714545 7714550 MYC TRANSFAC yes 70797445
chr19 7714553 7714557 LFA1 TRANSFAC yes 70797446
SNP sites on vista28490[chr19:7714356-7714558]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 7714407 rs114198366 C T
EGR1 SP1
5423482
chr19 7714476 rs116514158 G A
EGR1 JUN NR2F1 USF1
5423483
chr19 7714517 rs563027074 C T
EGR1 GATA1 GATA3 NFE
5423484
chr19 7714552 rs190677943 C T
EGR1
5423485
Genes possibly regulated by vista28490[chr19:7714356-7714558]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 7660788 7683190 + CAMSAP3 ENSG00000076826.5 7660788 0.81 1.0 16919 46432
chr19 7684411 7694451 - XAB2 ENSG00000076924.7 7694451 0.7 1.0 16920 80095
chr19 7694623 7696842 + PET100 ENSG00000229833.5 7694623 0.86 0.94 16921 80267
chr19 7694682 7707934 + CTD-3214H19.4 ENSG00000268400.1 7694682 0.98 0.95 16922 80326
chr19 7696497 7698634 - PCP2 ENSG00000174788.5 7698634 0.83 1.0 16923 84278
chr19 7701767 7712759 + STXBP2 ENSG00000076944.10 7701767 0.74 1.0 16924 87411
chr19 7733930 7735334 + RETN ENSG00000104918.4 7733930 0.94 0.0 16925 80628
chr19 7741514 7744712 + C19orf59 ENSG00000183019.3 7741514 0.96 0.95 16926 73044
chr19 7743387 7747740 + CTD-3214H19.16 ENSG00000269711.1 7743387 0.99 1.0 16927 71171
chr19 7745729 7747744 + TRAPPC5 ENSG00000181029.7 7745729 0.67 0.86 16928 68829
chr19 7753644 7767032 - FCER2 ENSG00000104921.10 7767032 0.98 0.99 16929 47526
chr19 7793843 7798792 - CLEC4G ENSG00000182566.8 7798792 0.99 0.0 16930 15766
chr19 7804879 7812464 - CD209 ENSG00000090659.13 7812464 0.84 1.0 16931 2094
Expression level of Genes
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miRNAs possibly regulated by vista28490[chr19:7714356-7714558]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results