EnhancerDB
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  3. vista28491[chr19:7720323-7720877]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28491[chr19:7720323-7720877]
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Tissue distribution of vista28491
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Transcription factor that possibly regulate vista28491[chr19:7720323-7720877]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 7720333 7720346 ELF1 JASPAR yes 70797447
chr19 7720333 7720346 ELF1 JASPAR yes 112333514
chr19 7720341 7720349 NR4A2 JASPAR yes 70797448
chr19 7720341 7720349 NR4A2 JASPAR yes 112333515
chr19 7720370 7720386 SOX8 JASPAR yes 70797449
chr19 7720370 7720386 SOX8 JASPAR yes 112333516
chr19 7720383 7720394 CEBPB JASPAR yes 70797450
chr19 7720383 7720394 CEBPB JASPAR yes 112333517
chr19 7720384 7720395 CEBPA JASPAR yes 70797451
chr19 7720384 7720395 CEBPA JASPAR yes 112333518
chr19 7720405 7720424 PAX5 JASPAR yes 70797452
chr19 7720405 7720424 PAX5 JASPAR yes 112333519
chr19 7720409 7720420 NFE2L2 JASPAR yes 70797453
chr19 7720409 7720420 NFE2L2 JASPAR yes 112333520
chr19 7720431 7720446 FOXP1 JASPAR yes 70797454
chr19 7720431 7720446 FOXP1 JASPAR yes 112333521
chr19 7720434 7720445 FOXP2 JASPAR yes 70797455
chr19 7720434 7720445 FOXP2 JASPAR yes 112333522
chr19 7720438 7720444 HiNF-A TRANSFAC yes 70797456
chr19 7720438 7720444 HiNF-A TRANSFAC yes 112333523
chr19 7720440 7720452 FOXI1 JASPAR yes 70797457
chr19 7720440 7720452 FOXI1 JASPAR yes 112333524
chr19 7720447 7720450 MYB TRANSFAC yes 70797458
chr19 7720447 7720450 MYB TRANSFAC yes 112333525
chr19 7720462 7720466 H4TF2 TRANSFAC yes 70797459
chr19 7720462 7720466 H4TF2 TRANSFAC yes 112333526
chr19 7720498 7720518 RREB1 JASPAR yes 70797460
chr19 7720498 7720518 RREB1 JASPAR yes 112333527
chr19 7720506 7720511 SP1 TRANSFAC yes 70797461
chr19 7720506 7720511 SP1 TRANSFAC yes 112333528
chr19 7720548 7720554 SOX10 JASPAR yes 70797462
chr19 7720548 7720554 SOX10 JASPAR yes 112333529
chr19 7720549 7720560 DUX4 JASPAR yes 70797463
chr19 7720549 7720560 DUX4 JASPAR yes 112333530
chr19 7720551 7720556 ETS2 TRANSFAC yes 70797464
chr19 7720551 7720556 ETS2 TRANSFAC yes 112333531
chr19 7720578 7720590 PROX1 JASPAR yes 70797465
chr19 7720578 7720590 PROX1 JASPAR yes 112333532
chr19 7720606 7720621 JUND JASPAR yes 70797466
chr19 7720606 7720621 JUND JASPAR yes 112333533
chr19 7720607 7720620 JUN JASPAR yes 70797467
chr19 7720607 7720620 JUN JASPAR yes 112333534
chr19 7720608 7720621 ATF4 JASPAR yes 70797468
chr19 7720608 7720621 ATF4 JASPAR yes 112333535
chr19 7720609 7720621 DBP JASPAR yes 70797469
chr19 7720609 7720621 HLF JASPAR yes 70797470
chr19 7720609 7720621 JDP2 JASPAR yes 70797471
chr19 7720609 7720621 TEF JASPAR yes 70797472
chr19 7720609 7720621 DBP JASPAR yes 112333536
chr19 7720609 7720621 HLF JASPAR yes 112333537
chr19 7720609 7720621 JDP2 JASPAR yes 112333538
chr19 7720609 7720621 TEF JASPAR yes 112333539
chr19 7720611 7720622 NFIL3 JASPAR yes 70797473
chr19 7720611 7720622 NFIL3 JASPAR yes 112333540
chr19 7720616 7720619 MYB TRANSFAC yes 70797474
chr19 7720616 7720619 MYB TRANSFAC yes 112333541
chr19 7720616 7720635 PAX5 JASPAR yes 70797475
chr19 7720616 7720635 PAX5 JASPAR yes 112333542
chr19 7720630 7720635 ETS2 TRANSFAC yes 70797476
chr19 7720630 7720635 ETS2 TRANSFAC yes 112333543
chr19 7720630 7720638 FEV JASPAR yes 70797477
chr19 7720630 7720638 FEV JASPAR yes 112333544
chr19 7720642 7720656 JUN JASPAR yes 70797478
chr19 7720642 7720656 JUN JASPAR yes 112333545
chr19 7720644 7720655 BATF JASPAR yes 70797479
chr19 7720644 7720655 BATF JASPAR yes 112333546
chr19 7720645 7720656 JUNB JASPAR yes 70797480
chr19 7720645 7720656 JUNB JASPAR yes 112333547
chr19 7720648 7720654 JUN TRANSFAC yes 70797481
chr19 7720648 7720654 JUN TRANSFAC yes 112333548
chr19 7720653 7720664 TBX2 JASPAR yes 70797482
chr19 7720653 7720664 TBX2 JASPAR yes 112333549
chr19 7720659 7720665 SOX10 JASPAR yes 70797483
chr19 7720659 7720665 SOX10 JASPAR yes 112333550
chr19 7720668 7720683 ZIC4 JASPAR yes 70797484
chr19 7720668 7720683 ZIC4 JASPAR yes 112333551
chr19 7720672 7720683 EBF1 JASPAR yes 70797485
chr19 7720672 7720683 EBF1 JASPAR yes 112333552
chr19 7720676 7720689 NFKB2 JASPAR yes 70797486
chr19 7720676 7720689 NFKB2 JASPAR yes 112333553
chr19 7720701 7720715 SPI1 JASPAR yes 70797487
chr19 7720701 7720715 SPI1 JASPAR yes 112333554
chr19 7720703 7720724 IRF1 JASPAR yes 70797488
chr19 7720703 7720724 IRF1 JASPAR yes 112333555
chr19 7720704 7720719 LEF1 JASPAR yes 70797489
chr19 7720704 7720719 LEF1 JASPAR yes 112333556
chr19 7720705 7720720 PRDM1 JASPAR yes 70797490
chr19 7720705 7720720 STAT2 JASPAR yes 70797491
chr19 7720705 7720720 PRDM1 JASPAR yes 112333557
chr19 7720705 7720720 STAT2 JASPAR yes 112333558
chr19 7720707 7720719 IRF1 JASPAR yes 70797492
chr19 7720707 7720719 IRF1 JASPAR yes 112333559
chr19 7720707 7720721 IRF7 JASPAR yes 70797493
chr19 7720707 7720721 IRF7 JASPAR yes 112333560
chr19 7720712 7720716 YY1 TRANSFAC yes 70797494
chr19 7720712 7720716 YY1 TRANSFAC yes 112333561
chr19 7720742 7720748 HiNF-A TRANSFAC yes 70797495
chr19 7720742 7720748 HiNF-A TRANSFAC yes 112333562
chr19 7720747 7720752 MYC TRANSFAC yes 70797496
chr19 7720747 7720752 MYC TRANSFAC yes 112333563
chr19 7720752 7720765 SCRT2 JASPAR yes 70797497
chr19 7720752 7720765 SCRT2 JASPAR yes 112333564
chr19 7720754 7720766 TAL1 JASPAR yes 70797498
chr19 7720754 7720766 TAL1 JASPAR yes 112333565
chr19 7720755 7720767 NHLH1 JASPAR yes 70797499
chr19 7720755 7720767 NHLH1 JASPAR yes 112333566
chr19 7720756 7720766 MSC JASPAR yes 70797500
chr19 7720756 7720766 MYF6 JASPAR yes 70797501
chr19 7720756 7720766 NHLH1 JASPAR yes 70797502
chr19 7720756 7720766 TFAP4 JASPAR yes 70797503
chr19 7720756 7720766 MSC JASPAR yes 112333567
chr19 7720756 7720766 MYF6 JASPAR yes 112333568
chr19 7720756 7720766 NHLH1 JASPAR yes 112333569
chr19 7720756 7720766 TFAP4 JASPAR yes 112333570
chr19 7720763 7720773 NFIA JASPAR yes 70797504
chr19 7720763 7720773 NFIA JASPAR yes 112333571
chr19 7720765 7720771 NFIC JASPAR yes 70797505
chr19 7720765 7720771 NFIC JASPAR yes 112333572
chr19 7720769 7720784 AR JASPAR yes 70797506
chr19 7720769 7720784 AR JASPAR yes 112333573
chr19 7720785 7720800 STAT1 JASPAR yes 70797507
chr19 7720785 7720800 STAT1 JASPAR yes 112333574
chr19 7720796 7720801 ETS2 TRANSFAC yes 70797508
chr19 7720796 7720801 ETS2 TRANSFAC yes 112333575
chr19 7720796 7720804 FEV JASPAR yes 70797509
chr19 7720796 7720804 FEV JASPAR yes 112333576
chr19 7720816 7720821 ETS2 TRANSFAC yes 70797510
chr19 7720816 7720821 ETS2 TRANSFAC yes 112333577
chr19 7720832 7720837 SP1 TRANSFAC yes 70797511
chr19 7720832 7720837 SP1 TRANSFAC yes 112333578
chr19 7720863 7720868 GATA2 JASPAR yes 70797512
chr19 7720863 7720868 GATA2 JASPAR yes 112333579
chr19 7720877 7720882 GATA2 JASPAR yes 70797513
chr19 7720877 7720882 GATA2 JASPAR yes 112333580
SNP sites on vista28491[chr19:7720323-7720877]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 7720341 rs192810255 G C
ELF1 NR4A2
5423570
chr19 7720544 rs572339097 C T no 5423571
chr19 7720682 rs144800171 G A
EBF1 NFKB2 ZIC4
5423572
chr19 7720812 rs183749332 C A,T no 5423573
chr19 7720813 rs377356553 G A no 5423574
chr19 7720857 rs138741004 A G no 5423575
chr19 7720868 rs55806425 A G
GATA2
5423576
Genes possibly regulated by vista28491[chr19:7720323-7720877]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 7660788 7683190 + CAMSAP3 ENSG00000076826.5 7660788 0.81 1.0 16919 40465
chr19 7684411 7694451 - XAB2 ENSG00000076924.7 7694451 0.7 1.0 16920 74128
chr19 7694623 7696842 + PET100 ENSG00000229833.5 7694623 0.86 0.94 16921 74300
chr19 7694682 7707934 + CTD-3214H19.4 ENSG00000268400.1 7694682 0.98 0.95 16922 74359
chr19 7696497 7698634 - PCP2 ENSG00000174788.5 7698634 0.83 1.0 16923 78311
chr19 7701767 7712759 + STXBP2 ENSG00000076944.10 7701767 0.74 1.0 16924 81444
chr19 7733930 7735334 + RETN ENSG00000104918.4 7733930 0.94 0.0 16925 86947
chr19 7741514 7744712 + C19orf59 ENSG00000183019.3 7741514 0.96 0.95 16926 79363
chr19 7743387 7747740 + CTD-3214H19.16 ENSG00000269711.1 7743387 0.99 1.0 16927 77490
chr19 7745729 7747744 + TRAPPC5 ENSG00000181029.7 7745729 0.67 0.86 16928 75148
chr19 7753644 7767032 - FCER2 ENSG00000104921.10 7767032 0.98 0.99 16929 53845
chr19 7793843 7798792 - CLEC4G ENSG00000182566.8 7798792 0.99 0.0 16930 22085
chr19 7804879 7812464 - CD209 ENSG00000090659.13 7812464 0.84 1.0 16931 8413
Expression level of Genes
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miRNAs possibly regulated by vista28491[chr19:7720323-7720877]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results