EnhancerDB
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  3. vista28500[chr19:7892500-7892803]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28500[chr19:7892500-7892803]
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Tissue distribution of vista28500
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Transcription factor that possibly regulate vista28500[chr19:7892500-7892803]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 7892502 7892509 NFATC2 JASPAR yes 70797896
chr19 7892502 7892509 NFATC2 JASPAR yes 112342580
chr19 7892512 7892519 NFATC2 JASPAR yes 70797897
chr19 7892512 7892519 NFATC2 JASPAR yes 112342581
chr19 7892521 7892527 HiNF-A TRANSFAC yes 70797898
chr19 7892521 7892527 HiNF-A TRANSFAC yes 112342582
chr19 7892537 7892541 YY1 TRANSFAC yes 70797899
chr19 7892537 7892541 YY1 TRANSFAC yes 112342583
chr19 7892554 7892565 HOXC13 JASPAR yes 70797900
chr19 7892554 7892565 HOXC13 JASPAR yes 112342584
chr19 7892555 7892565 HOXA13 JASPAR yes 70797901
chr19 7892555 7892565 HOXB13 JASPAR yes 70797902
chr19 7892555 7892565 HOXD13 JASPAR yes 70797903
chr19 7892555 7892565 HOXA13 JASPAR yes 112342585
chr19 7892555 7892565 HOXB13 JASPAR yes 112342586
chr19 7892555 7892565 HOXD13 JASPAR yes 112342587
chr19 7892555 7892570 MEF2C JASPAR yes 70797904
chr19 7892555 7892570 MEF2C JASPAR yes 112342588
chr19 7892557 7892561 TEAD2 TRANSFAC yes 70797905
chr19 7892557 7892561 TEAD2 TRANSFAC yes 112342589
chr19 7892557 7892562 TBP TRANSFAC yes 70797906
chr19 7892557 7892562 TBP TRANSFAC yes 112342590
chr19 7892557 7892563 TFIID TRANSFAC yes 70797907
chr19 7892557 7892563 TFIID TRANSFAC yes 112342591
chr19 7892561 7892574 DUXA JASPAR yes 70797908
chr19 7892561 7892574 DUXA JASPAR yes 112342592
chr19 7892562 7892573 DUX4 JASPAR yes 70797909
chr19 7892562 7892573 DUX4 JASPAR yes 112342593
chr19 7892588 7892600 YY1 JASPAR yes 70797910
chr19 7892588 7892600 YY1 JASPAR yes 112342594
chr19 7892593 7892597 YY1 TRANSFAC yes 70797911
chr19 7892593 7892597 YY1 TRANSFAC yes 112342595
chr19 7892598 7892611 EOMES JASPAR yes 70797912
chr19 7892598 7892611 EOMES JASPAR yes 112342596
chr19 7892616 7892622 TCF4 TRANSFAC yes 70797913
chr19 7892616 7892622 TCF4 TRANSFAC yes 112342597
chr19 7892623 7892636 NR2F1 JASPAR yes 70797914
chr19 7892623 7892636 NR2F1 JASPAR yes 112342598
chr19 7892625 7892639 RXRB JASPAR yes 70797915
chr19 7892625 7892639 RXRG JASPAR yes 70797916
chr19 7892625 7892639 RXRB JASPAR yes 112342599
chr19 7892625 7892639 RXRG JASPAR yes 112342600
chr19 7892625 7892643 RARA JASPAR yes 70797917
chr19 7892625 7892643 RARA JASPAR yes 112342601
chr19 7892627 7892631 ESR1 TRANSFAC yes 70797918
chr19 7892627 7892631 ESR1 TRANSFAC yes 112342602
chr19 7892641 7892654 POU2F2 JASPAR yes 70797919
chr19 7892641 7892654 POU2F2 JASPAR yes 112342603
chr19 7892643 7892647 YY1 TRANSFAC yes 70797920
chr19 7892643 7892647 YY1 TRANSFAC yes 112342604
chr19 7892646 7892661 TFAP2C JASPAR yes 70797921
chr19 7892646 7892661 TFAP2C JASPAR yes 112342605
chr19 7892647 7892658 TFAP2A JASPAR yes 70797922
chr19 7892647 7892658 TFAP2B JASPAR yes 70797923
chr19 7892647 7892658 TFAP2C JASPAR yes 70797924
chr19 7892647 7892658 TFAP2A JASPAR yes 112342606
chr19 7892647 7892658 TFAP2B JASPAR yes 112342607
chr19 7892647 7892658 TFAP2C JASPAR yes 112342608
chr19 7892664 7892669 GATA2 JASPAR yes 70797925
chr19 7892664 7892669 GATA2 JASPAR yes 112342609
chr19 7892665 7892677 INSM1 JASPAR yes 70797926
chr19 7892665 7892677 INSM1 JASPAR yes 112342610
chr19 7892674 7892686 TAL1 JASPAR yes 70797927
chr19 7892674 7892686 TAL1 JASPAR yes 112342611
chr19 7892676 7892686 FIGLA JASPAR yes 70797928
chr19 7892676 7892686 MSC JASPAR yes 70797929
chr19 7892676 7892686 MYF6 JASPAR yes 70797930
chr19 7892676 7892686 TFAP4 JASPAR yes 70797931
chr19 7892676 7892686 FIGLA JASPAR yes 112342612
chr19 7892676 7892686 MSC JASPAR yes 112342613
chr19 7892676 7892686 MYF6 JASPAR yes 112342614
chr19 7892676 7892686 TFAP4 JASPAR yes 112342615
chr19 7892676 7892688 TAL1 JASPAR yes 70797932
chr19 7892676 7892688 TAL1 JASPAR yes 112342616
chr19 7892677 7892690 SCRT2 JASPAR yes 70797933
chr19 7892677 7892690 SCRT2 JASPAR yes 112342617
chr19 7892703 7892707 H4TF2 TRANSFAC yes 70797934
chr19 7892703 7892707 H4TF2 TRANSFAC yes 112342618
chr19 7892716 7892719 MYB TRANSFAC yes 70797935
chr19 7892716 7892719 MYB TRANSFAC yes 112342619
chr19 7892721 7892725 ESR1 TRANSFAC yes 70797936
chr19 7892721 7892725 ESR1 TRANSFAC yes 112342620
chr19 7892739 7892754 HSF1 JASPAR yes 70797937
chr19 7892739 7892754 HSF1 JASPAR yes 112342621
chr19 7892740 7892753 HSF2 JASPAR yes 70797938
chr19 7892740 7892753 HSF2 JASPAR yes 112342622
chr19 7892749 7892766 RARA JASPAR yes 70797939
chr19 7892749 7892766 RARA JASPAR yes 112342623
chr19 7892754 7892771 RARA JASPAR yes 70797940
chr19 7892754 7892771 RXRA JASPAR yes 70797941
chr19 7892754 7892771 RARA JASPAR yes 112342624
chr19 7892754 7892771 RXRA JASPAR yes 112342625
chr19 7892758 7892765 E2F1 TRANSFAC yes 70797942
chr19 7892758 7892765 E2F1 TRANSFAC yes 112342626
chr19 7892775 7892787 GLI2 JASPAR yes 70797943
chr19 7892775 7892787 GLI2 JASPAR yes 112342627
chr19 7892784 7892788 NFE TRANSFAC yes 70797944
chr19 7892784 7892788 NFE TRANSFAC yes 112342628
chr19 7892784 7892797 SMAD2 JASPAR yes 70797945
chr19 7892784 7892797 SMAD2 JASPAR yes 112342629
chr19 7892792 7892802 TEAD1 JASPAR yes 70797946
chr19 7892792 7892802 TEAD4 JASPAR yes 70797947
chr19 7892792 7892802 TEAD1 JASPAR yes 112342630
chr19 7892792 7892802 TEAD4 JASPAR yes 112342631
chr19 7892793 7892801 TEAD3 JASPAR yes 70797948
chr19 7892793 7892801 TEAD3 JASPAR yes 112342632
SNP sites on vista28500[chr19:7892500-7892803]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 7892713 rs182886736 A G no 5425160
Genes possibly regulated by vista28500[chr19:7892500-7892803]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 7793843 7798792 - CLEC4G ENSG00000182566.8 7798792 0.99 0.0 16930 6292
chr19 7804879 7812464 - CD209 ENSG00000090659.13 7812464 0.84 1.0 16931 19964
chr19 7828035 7834491 + CLEC4M ENSG00000104938.12 7828035 0.99 1.0 16932 35535
chr19 7895119 7929862 + EVI5L ENSG00000142459.4 7895119 0.65 1.0 16933 97684
chr19 7933605 7939326 - CTD-3193O13.9 ENSG00000183248.7 7939326 0.9 1.0 16934 53477
chr19 7953390 7966901 + LRRC8E ENSG00000171017.6 7953390 0.92 1.0 16935 39413
chr19 7963689 7968427 - AC010336.1 ENSG00000214248.2 7968427 0.84 1.0 16936 24376
chr19 7968728 7979363 + MAP2K7 ENSG00000076984.13 7968728 0.65 1.0 16937 24075
chr19 7981030 7983982 + TGFBR3L ENSG00000260001.2 7981030 0.82 1.0 16938 11773
chr19 7985201 7988135 + SNAPC2 ENSG00000104976.7 7985201 0.81 1.0 16939 7602
chr19 7989372 7991051 - CTXN1 ENSG00000178531.4 7991051 0.94 1.0 16940 1752
Expression level of Genes
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miRNAs possibly regulated by vista28500[chr19:7892500-7892803]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results