EnhancerDB
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  3. vista28504[chr19:8060665-8061040]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28504[chr19:8060665-8061040]
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Tissue distribution of vista28504
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Transcription factor that possibly regulate vista28504[chr19:8060665-8061040]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 8060664 8060679 FOXP1 JASPAR yes 70798088
chr19 8060664 8060679 FOXP1 JASPAR yes 112348725
chr19 8060665 8060680 FOXP1 JASPAR yes 70798089
chr19 8060665 8060680 FOXP1 JASPAR yes 112348726
chr19 8060666 8060672 TBP TRANSFAC yes 70798090
chr19 8060666 8060672 TBP TRANSFAC yes 112348727
chr19 8060666 8060681 FOXP1 JASPAR yes 70798091
chr19 8060666 8060681 FOXP1 JASPAR yes 112348728
chr19 8060666 8060687 IRF1 JASPAR yes 70798092
chr19 8060666 8060687 IRF1 JASPAR yes 112348729
chr19 8060667 8060682 FOXP1 JASPAR yes 70798093
chr19 8060667 8060682 FOXP1 JASPAR yes 112348730
chr19 8060667 8060688 IRF1 JASPAR yes 70798094
chr19 8060667 8060688 IRF1 JASPAR yes 112348731
chr19 8060668 8060683 FOXP1 JASPAR yes 70798095
chr19 8060668 8060683 FOXP1 JASPAR yes 112348732
chr19 8060669 8060684 FOXP1 JASPAR yes 70798096
chr19 8060669 8060684 FOXP1 JASPAR yes 112348733
chr19 8060676 8060690 ONECUT3 JASPAR yes 70798097
chr19 8060676 8060690 ONECUT3 JASPAR yes 112348734
chr19 8060683 8060688 GATA2 JASPAR yes 70798098
chr19 8060683 8060688 GATA2 JASPAR yes 112348735
chr19 8060687 8060697 TFCP2 JASPAR yes 70798099
chr19 8060687 8060697 TFCP2 JASPAR yes 112348736
chr19 8060692 8060697 GATA2 JASPAR yes 70798100
chr19 8060692 8060697 GATA2 JASPAR yes 112348737
chr19 8060728 8060743 HSF1 JASPAR yes 70798101
chr19 8060728 8060743 HSF1 JASPAR yes 112348738
chr19 8060750 8060756 ZNF354C JASPAR yes 70798102
chr19 8060750 8060756 ZNF354C JASPAR yes 112348739
chr19 8060759 8060773 FOXF2 JASPAR yes 70798103
chr19 8060759 8060773 FOXF2 JASPAR yes 112348740
chr19 8060762 8060773 FOXP2 JASPAR yes 70798104
chr19 8060762 8060773 FOXP2 JASPAR yes 112348741
chr19 8060764 8060771 FOXD2 JASPAR yes 70798105
chr19 8060764 8060771 FOXI1 JASPAR yes 70798106
chr19 8060764 8060771 FOXL1 JASPAR yes 70798107
chr19 8060764 8060771 FOXO4 JASPAR yes 70798108
chr19 8060764 8060771 FOXO6 JASPAR yes 70798109
chr19 8060764 8060771 FOXP3 JASPAR yes 70798110
chr19 8060764 8060771 FOXD2 JASPAR yes 112348742
chr19 8060764 8060771 FOXI1 JASPAR yes 112348743
chr19 8060764 8060771 FOXL1 JASPAR yes 112348744
chr19 8060764 8060771 FOXO4 JASPAR yes 112348745
chr19 8060764 8060771 FOXO6 JASPAR yes 112348746
chr19 8060764 8060771 FOXP3 JASPAR yes 112348747
chr19 8060764 8060772 FOXD1 JASPAR yes 70798111
chr19 8060764 8060772 FOXG1 JASPAR yes 70798112
chr19 8060764 8060772 FOXO3 JASPAR yes 70798113
chr19 8060764 8060772 FOXD1 JASPAR yes 112348748
chr19 8060764 8060772 FOXG1 JASPAR yes 112348749
chr19 8060764 8060772 FOXO3 JASPAR yes 112348750
chr19 8060769 8060773 YY1 TRANSFAC yes 70798114
chr19 8060769 8060773 YY1 TRANSFAC yes 112348751
chr19 8060794 8060815 IRF1 JASPAR yes 70798115
chr19 8060794 8060815 IRF1 JASPAR yes 112348752
chr19 8060796 8060811 PRDM1 JASPAR yes 70798116
chr19 8060796 8060811 STAT2 JASPAR yes 70798117
chr19 8060796 8060811 PRDM1 JASPAR yes 112348753
chr19 8060796 8060811 STAT2 JASPAR yes 112348754
chr19 8060799 8060814 FOXP1 JASPAR yes 70798118
chr19 8060799 8060814 FOXP1 JASPAR yes 112348755
chr19 8060800 8060815 FOXP1 JASPAR yes 70798119
chr19 8060800 8060815 FOXP1 JASPAR yes 112348756
chr19 8060801 8060816 FOXP1 JASPAR yes 70798120
chr19 8060801 8060816 FOXP1 JASPAR yes 112348757
chr19 8060802 8060817 FOXP1 JASPAR yes 70798121
chr19 8060802 8060817 FOXP1 JASPAR yes 112348758
chr19 8060809 8060820 BATF JASPAR yes 70798122
chr19 8060809 8060820 BATF JASPAR yes 112348759
chr19 8060822 8060841 PAX5 JASPAR yes 70798123
chr19 8060822 8060841 PAX5 JASPAR yes 112348760
chr19 8060842 8060851 NKX2-8 JASPAR yes 70798124
chr19 8060842 8060851 NKX2-8 JASPAR yes 112348761
chr19 8060921 8060936 HNF1A JASPAR yes 70798125
chr19 8060921 8060936 HNF1A JASPAR yes 112348762
chr19 8060923 8060939 POU4F2 JASPAR yes 70798126
chr19 8060923 8060939 POU4F2 JASPAR yes 112348763
chr19 8060925 8060940 FOXP1 JASPAR yes 70798127
chr19 8060925 8060940 FOXP1 JASPAR yes 112348764
chr19 8060930 8060942 MEF2D JASPAR yes 70798128
chr19 8060930 8060942 MEF2D JASPAR yes 112348765
chr19 8060932 8060936 YY1 TRANSFAC yes 70798129
chr19 8060932 8060936 YY1 TRANSFAC yes 112348766
chr19 8060937 8060950 ZBED1 JASPAR yes 70798130
chr19 8060937 8060950 ZBED1 JASPAR yes 112348767
chr19 8060944 8060950 GATA3 JASPAR yes 70798131
chr19 8060944 8060950 GATA3 JASPAR yes 112348768
chr19 8061003 8061017 PLAG1 JASPAR yes 70798132
chr19 8061003 8061017 PLAG1 JASPAR yes 112348769
chr19 8061008 8061015 E2F1 TRANSFAC yes 70798133
chr19 8061008 8061015 E2F1 TRANSFAC yes 112348770
SNP sites on vista28504[chr19:8060665-8061040]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 8060667 rs36099865 TA T
FOXP1 IRF1 TBP
5426034
chr19 8060667 rs549654459 TA T
FOXP1 IRF1 TBP
5426035
chr19 8060702 rs12977189 C T no 5426036
chr19 8060958 rs140774838 C G no 5426037
chr19 8060970 rs143127722 C T no 5426038
chr19 8061010 rs533896995 T C
E2F1 PLAG1
5426039
chr19 8061040 rs564669949 G A no 5426040
Genes possibly regulated by vista28504[chr19:8060665-8061040]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 7963689 7968427 - AC010336.1 ENSG00000214248.2 7968427 0.84 1.0 16936 7762
chr19 7968728 7979363 + MAP2K7 ENSG00000076984.13 7968728 0.65 1.0 16937 8063
chr19 7981030 7983982 + TGFBR3L ENSG00000260001.2 7981030 0.82 1.0 16938 20365
chr19 7985201 7988135 + SNAPC2 ENSG00000104976.7 7985201 0.81 1.0 16939 24536
chr19 7989372 7991051 - CTXN1 ENSG00000178531.4 7991051 0.94 1.0 16940 30386
chr19 7991603 8008805 - TIMM44 ENSG00000104980.3 8008805 0.54 1.0 16941 48140
chr19 8023463 8070543 - ELAVL1 ENSG00000066044.9 8070543 0.71 0.99 16942 90497
chr19 8117651 8127534 + CCL25 ENSG00000131142.9 8117651 1.0 0.88 16943 43389
Expression level of Genes
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miRNAs possibly regulated by vista28504[chr19:8060665-8061040]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results