EnhancerDB
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  3. vista28508[chr19:8272965-8273383]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28508[chr19:8272965-8273383]
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Tissue distribution of vista28508
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Transcription factor that possibly regulate vista28508[chr19:8272965-8273383]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 8273362 8273925 GATA2 UCSC Txn Factor no Conserved 108381681
chr19 8272965 8272980 FOXP1 JASPAR yes 70798299
chr19 8272965 8272986 IRF1 JASPAR yes 70798300
chr19 8272966 8272981 FOXP1 JASPAR yes 70798301
chr19 8272968 8272983 FOXP1 JASPAR yes 70798302
chr19 8272969 8272990 IRF1 JASPAR yes 70798303
chr19 8272970 8272985 FOXP1 JASPAR yes 70798304
chr19 8272970 8272991 IRF1 JASPAR yes 70798305
chr19 8272971 8272992 IRF1 JASPAR yes 70798306
chr19 8272975 8272990 PRDM1 JASPAR yes 70798307
chr19 8272975 8272996 IRF1 JASPAR yes 70798308
chr19 8272976 8272991 FOXP1 JASPAR yes 70798309
chr19 8272976 8272997 IRF1 JASPAR yes 70798310
chr19 8272977 8272998 IRF1 JASPAR yes 70798311
chr19 8272978 8272992 IRF7 JASPAR yes 70798312
chr19 8272981 8272996 FOXP1 JASPAR yes 70798313
chr19 8272982 8273003 IRF1 JASPAR yes 70798314
chr19 8272983 8272998 FOXP1 JASPAR yes 70798315
chr19 8272983 8272998 LEF1 JASPAR yes 70798316
chr19 8272983 8273004 IRF1 JASPAR yes 70798317
chr19 8272987 8273002 STAT2 JASPAR yes 70798318
chr19 8272988 8273003 FOXP1 JASPAR yes 70798319
chr19 8272989 8273010 IRF1 JASPAR yes 70798320
chr19 8272991 8273006 IRF9 JASPAR yes 70798321
chr19 8272993 8273007 STAT1 JASPAR yes 70798322
chr19 8272993 8273008 STAT2 JASPAR yes 70798323
chr19 8273016 8273021 ETS2 TRANSFAC yes 70798324
chr19 8273095 8273109 PLAG1 JASPAR yes 70798325
chr19 8273096 8273114 RARA JASPAR yes 70798326
chr19 8273102 8273107 SP1 TRANSFAC yes 70798327
chr19 8273102 8273108 SP1 TRANSFAC yes 70798328
chr19 8273104 8273113 SP1 TRANSFAC yes 70798329
chr19 8273105 8273111 SP1 TRANSFAC yes 70798330
chr19 8273105 8273115 SP1 JASPAR yes 70798331
chr19 8273106 8273113 SP1 TRANSFAC yes 70798332
chr19 8273107 8273112 SP1 TRANSFAC yes 70798333
chr19 8273107 8273113 SP1 TRANSFAC yes 70798334
chr19 8273107 8273114 SP1 TRANSFAC yes 70798335
chr19 8273108 8273122 GLIS2 JASPAR yes 70798336
chr19 8273122 8273126 NFE TRANSFAC yes 70798337
chr19 8273132 8273140 FEV JASPAR yes 70798338
chr19 8273151 8273166 TFAP2C JASPAR yes 70798339
chr19 8273153 8273162 TFAP2A JASPAR yes 70798340
chr19 8273159 8273174 TFAP2A JASPAR yes 70798341
chr19 8273184 8273194 SREBF2 JASPAR yes 70798342
chr19 8273208 8273222 JUN JASPAR yes 70798343
chr19 8273210 8273221 BATF JASPAR yes 70798344
chr19 8273211 8273222 JUNB JASPAR yes 70798345
chr19 8273211 8273222 NFE2L2 JASPAR yes 70798346
chr19 8273212 8273223 FOS JASPAR yes 70798347
chr19 8273212 8273223 FOSL1 JASPAR yes 70798348
chr19 8273212 8273223 JUND JASPAR yes 70798349
chr19 8273214 8273221 JUN TRANSFAC yes 70798350
chr19 8273234 8273239 GATA2 JASPAR yes 70798351
chr19 8273236 8273242 MZF1 JASPAR yes 70798352
chr19 8273240 8273244 YY1 TRANSFAC yes 70798353
chr19 8273294 8273299 SP1 TRANSFAC yes 70798354
chr19 8273313 8273327 EBF1 JASPAR yes 70798355
chr19 8273315 8273327 TFAP2A JASPAR yes 70798356
chr19 8273315 8273327 TFAP2B JASPAR yes 70798357
chr19 8273315 8273327 TFAP2C JASPAR yes 70798358
chr19 8273315 8273330 TFAP2A JASPAR yes 70798359
chr19 8273315 8273330 TFAP2C JASPAR yes 70798360
chr19 8273316 8273327 EBF1 JASPAR yes 70798361
chr19 8273316 8273327 TFAP2A JASPAR yes 70798362
chr19 8273316 8273327 TFAP2B JASPAR yes 70798363
chr19 8273317 8273326 TFAP2A JASPAR yes 70798364
chr19 8273321 8273331 NFKB1 JASPAR yes 70798365
chr19 8273321 8273342 REST JASPAR yes 70798366
chr19 8273325 8273329 NFE TRANSFAC yes 70798367
chr19 8273353 8273363 SP1 JASPAR yes 70798368
chr19 8273356 8273362 NFE2 TRANSFAC yes 70798369
chr19 8273357 8273376 REST JASPAR yes 70798370
chr19 8273358 8273369 NRF1 JASPAR yes 70798371
chr19 8273366 8273378 NHLH1 JASPAR yes 70798372
SNP sites on vista28508[chr19:8272965-8273383]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 8272967 rs201631095 C CA
FOXP1 IRF1
5427369
chr19 8272967 rs540823844 C CA
FOXP1 IRF1
5427370
chr19 8272968 rs79358847 A C,G
FOXP1 IRF1
5427371
chr19 8272972 rs543928045 A C
FOXP1 IRF1
5427372
chr19 8272974 rs201263680 A G
FOXP1 IRF1
5427373
Genes possibly regulated by vista28508[chr19:8272965-8273383]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 8130286 8214730 - FBN3 ENSG00000142449.8 8214730 0.97 1.0 16944 41765
chr19 8271620 8327305 + CERS4 ENSG00000090661.7 8271620 0.73 1.0 16945 98655
chr19 8367011 8373240 - CD320 ENSG00000167775.6 8373240 0.72 1.0 16946 143
Expression level of Genes
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miRNAs possibly regulated by vista28508[chr19:8272965-8273383]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results