EnhancerDB
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  3. vista28512[chr19:8518703-8518940]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28512[chr19:8518703-8518940]
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Tissue distribution of vista28512
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Transcription factor that possibly regulate vista28512[chr19:8518703-8518940]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 8518706 8518710 NFE TRANSFAC yes 70798506
chr19 8518706 8518710 NFE TRANSFAC yes 112368479
chr19 8518736 8518742 YY1 JASPAR yes 70798507
chr19 8518736 8518742 YY1 JASPAR yes 112368480
chr19 8518765 8518768 MYB TRANSFAC yes 70798508
chr19 8518765 8518768 MYB TRANSFAC yes 112368481
chr19 8518768 8518780 GLI2 JASPAR yes 70798509
chr19 8518768 8518780 GLI2 JASPAR yes 112368482
chr19 8518776 8518788 PKNOX2 JASPAR yes 70798510
chr19 8518776 8518788 PKNOX2 JASPAR yes 112368483
chr19 8518789 8518795 SOX10 JASPAR yes 70798511
chr19 8518789 8518795 SOX10 JASPAR yes 112368484
chr19 8518790 8518805 FOXP1 JASPAR yes 70798512
chr19 8518790 8518805 FOXP1 JASPAR yes 112368485
chr19 8518792 8518810 RARA JASPAR yes 70798513
chr19 8518792 8518810 RARA JASPAR yes 112368486
chr19 8518809 8518814 ETS2 TRANSFAC yes 70798514
chr19 8518809 8518814 ETS2 TRANSFAC yes 112368487
chr19 8518843 8518856 SCRT2 JASPAR yes 70798515
chr19 8518843 8518856 SCRT2 JASPAR yes 112368488
chr19 8518844 8518850 NFIC JASPAR yes 70798516
chr19 8518844 8518850 NFIC JASPAR yes 112368489
chr19 8518850 8518858 TBX15 JASPAR yes 70798517
chr19 8518850 8518858 TBX15 JASPAR yes 112368490
chr19 8518851 8518856 SP1 TRANSFAC yes 70798518
chr19 8518851 8518856 SP1 TRANSFAC yes 112368491
chr19 8518869 8518873 NFE TRANSFAC yes 70798519
chr19 8518869 8518873 NFE TRANSFAC yes 112368492
chr19 8518869 8518882 SMAD2 JASPAR yes 70798520
chr19 8518869 8518882 SMAD2 JASPAR yes 112368493
chr19 8518909 8518923 TCF7L2 JASPAR yes 70798521
chr19 8518909 8518923 TCF7L2 JASPAR yes 112368494
chr19 8518913 8518919 TCF1 TRANSFAC yes 70798522
chr19 8518913 8518919 TCF1 TRANSFAC yes 112368495
chr19 8518934 8518943 SP1 TRANSFAC yes 70798523
chr19 8518934 8518943 SP1 TRANSFAC yes 112368496
chr19 8518937 8518958 IRF1 JASPAR yes 70798524
chr19 8518937 8518958 IRF1 JASPAR yes 112368497
chr19 8518939 8518954 STAT2 JASPAR yes 70798525
chr19 8518939 8518954 STAT2 JASPAR yes 112368498
chr19 8518940 8518954 STAT1 JASPAR yes 70798526
chr19 8518940 8518954 STAT1 JASPAR yes 112368499
SNP sites on vista28512[chr19:8518703-8518940]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 8518722 rs550832205 C T no 5428985
chr19 8518824 rs546178369 A G no 5428986
chr19 8518900 rs6603081 C T no 5428987
Genes possibly regulated by vista28512[chr19:8518703-8518940]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 8428173 8439257 + ANGPTL4 ENSG00000167772.7 8428173 0.87 1.0 16951 9470
chr19 8454865 8469318 + RAB11B ENSG00000185236.7 8454865 0.77 1.0 16952 36162
chr19 8478154 8503901 + MARCH2 ENSG00000099785.6 8478154 0.75 1.0 16953 59451
chr19 8509651 8553998 + HNRNPM ENSG00000099783.7 8509651 0.76 1.0 16954 90948
chr19 8554940 8567996 - PRAM1 ENSG00000133246.7 8567996 0.9 1.0 16955 50944
chr19 8575462 8579048 - ZNF414 ENSG00000133250.9 8579048 0.65 1.0 16956 39892
Expression level of Genes
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miRNAs possibly regulated by vista28512[chr19:8518703-8518940]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results