EnhancerDB
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  3. vista28523[chr19:8638437-8638868]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28523[chr19:8638437-8638868]
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Tissue distribution of vista28523
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Transcription factor that possibly regulate vista28523[chr19:8638437-8638868]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 8638463 8638476 SMAD2 JASPAR yes 70799019
chr19 8638466 8638476 TBR1 JASPAR yes 70799020
chr19 8638467 8638477 TBX21 JASPAR yes 70799021
chr19 8638468 8638476 MGA JASPAR yes 70799022
chr19 8638468 8638476 TBX15 JASPAR yes 70799023
chr19 8638468 8638476 TBX1 JASPAR yes 70799024
chr19 8638468 8638476 TBX4 JASPAR yes 70799025
chr19 8638468 8638476 TBX5 JASPAR yes 70799026
chr19 8638468 8638477 ZEB1 JASPAR yes 70799027
chr19 8638468 8638480 PKNOX1 JASPAR yes 70799028
chr19 8638468 8638480 TGIF1 JASPAR yes 70799029
chr19 8638468 8638481 ZBTB18 JASPAR yes 70799030
chr19 8638469 8638479 FIGLA JASPAR yes 70799031
chr19 8638469 8638479 ID4 JASPAR yes 70799032
chr19 8638469 8638479 TCF3 JASPAR yes 70799033
chr19 8638469 8638479 TCF4 JASPAR yes 70799034
chr19 8638470 8638479 SNAI2 JASPAR yes 70799035
chr19 8638471 8638476 USF2 TRANSFAC yes 70799036
chr19 8638478 8638491 EOMES JASPAR yes 70799037
chr19 8638480 8638490 TBR1 JASPAR yes 70799038
chr19 8638480 8638491 TBX20 JASPAR yes 70799039
chr19 8638480 8638491 TBX2 JASPAR yes 70799040
chr19 8638481 8638491 TBX21 JASPAR yes 70799041
chr19 8638482 8638490 MGA JASPAR yes 70799042
chr19 8638482 8638490 TBX15 JASPAR yes 70799043
chr19 8638482 8638490 TBX1 JASPAR yes 70799044
chr19 8638482 8638490 TBX4 JASPAR yes 70799045
chr19 8638482 8638490 TBX5 JASPAR yes 70799046
chr19 8638493 8638507 PLAG1 JASPAR yes 70799047
chr19 8638506 8638512 ZNF354C JASPAR yes 70799048
chr19 8638545 8638557 YY1 JASPAR yes 70799049
chr19 8638547 8638558 YY2 JASPAR yes 70799050
chr19 8638548 8638560 HLF JASPAR yes 70799051
chr19 8638558 8638568 SP1 JASPAR yes 70799052
chr19 8638599 8638608 SNAI2 JASPAR yes 70799053
chr19 8638599 8638609 ID4 JASPAR yes 70799054
chr19 8638599 8638609 NHLH1 JASPAR yes 70799055
chr19 8638599 8638609 TCF3 JASPAR yes 70799056
chr19 8638599 8638609 TCF4 JASPAR yes 70799057
chr19 8638644 8638659 TFAP2A JASPAR yes 70799058
chr19 8638653 8638672 CTCF JASPAR yes 70799059
chr19 8638659 8638680 ZNF263 JASPAR yes 70799060
chr19 8638666 8638683 ESR1 JASPAR yes 70799061
chr19 8638684 8638695 CEBPB JASPAR yes 70799062
chr19 8638685 8638696 CEBPA JASPAR yes 70799063
chr19 8638706 8638725 PAX5 JASPAR yes 70799064
chr19 8638710 8638721 NFE2L2 JASPAR yes 70799065
chr19 8638726 8638730 NFE TRANSFAC yes 70799066
chr19 8638733 8638748 FOXP1 JASPAR yes 70799067
chr19 8638733 8638754 IRF1 JASPAR yes 70799068
chr19 8638735 8638755 RREB1 JASPAR yes 70799069
chr19 8638738 8638750 IRF1 JASPAR yes 70799070
chr19 8638738 8638753 FOXP1 JASPAR yes 70799071
chr19 8638739 8638760 IRF1 JASPAR yes 70799072
chr19 8638740 8638760 RREB1 JASPAR yes 70799073
chr19 8638746 8638761 FOXP1 JASPAR yes 70799074
chr19 8638749 8638763 ONECUT2 JASPAR yes 70799075
chr19 8638749 8638763 ONECUT3 JASPAR yes 70799076
chr19 8638751 8638760 SRY JASPAR yes 70799077
chr19 8638764 8638770 YY1 JASPAR yes 70799078
chr19 8638771 8638786 RUNX2 JASPAR yes 70799079
chr19 8638772 8638782 RUNX3 JASPAR yes 70799080
chr19 8638775 8638795 RREB1 JASPAR yes 70799081
chr19 8638782 8638785 MYB TRANSFAC yes 70799082
chr19 8638793 8638797 YY1 TRANSFAC yes 70799083
chr19 8638797 8638809 ZBTB7A JASPAR yes 70799084
chr19 8638798 8638810 ZBTB7C JASPAR yes 70799085
chr19 8638798 8638813 RUNX2 JASPAR yes 70799086
chr19 8638799 8638809 RUNX3 JASPAR yes 70799087
chr19 8638799 8638810 RUNX1 JASPAR yes 70799088
chr19 8638818 8638838 TP63 JASPAR yes 70799089
chr19 8638827 8638831 NFE TRANSFAC yes 70799090
chr19 8638828 8638833 GATA2 JASPAR yes 70799091
chr19 8638848 8638853 MYB TRANSFAC yes 70799092
SNP sites on vista28523[chr19:8638437-8638868]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 8638559 rs12972649 C G
HLF SP1
5429687
chr19 8638579 rs185023976 C T no 5429688
chr19 8638723 rs535403200 G A
PAX5
5429689
chr19 8638782 rs143969087 A G
MYB RREB1 RUNX2 RUNX3
5429690
chr19 8638827 rs62119437 C T
NFE TP63
5429691
Genes possibly regulated by vista28523[chr19:8638437-8638868]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 8554940 8567996 - PRAM1 ENSG00000133246.7 8567996 0.9 1.0 16955 29559
chr19 8575462 8579048 - ZNF414 ENSG00000133250.9 8579048 0.65 1.0 16956 40611
chr19 8585674 8642461 - MYO1F ENSG00000142347.12 8642461 0.92 1.0 16957 96407
chr19 8645126 8675620 - ADAMTS10 ENSG00000142303.9 8675620 0.81 1.0 16958 63248
Expression level of Genes
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miRNAs possibly regulated by vista28523[chr19:8638437-8638868]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results