EnhancerDB
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  3. vista28529[chr19:9095662-9095964]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28529[chr19:9095662-9095964]
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Tissue distribution of vista28529
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Transcription factor that possibly regulate vista28529[chr19:9095662-9095964]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 9095662 9095677 FOXP1 JASPAR yes 70799438
chr19 9095663 9095669 TBP TRANSFAC yes 70799439
chr19 9095663 9095678 FOXP1 JASPAR yes 70799440
chr19 9095663 9095684 IRF1 JASPAR yes 70799441
chr19 9095664 9095679 FOXP1 JASPAR yes 70799442
chr19 9095664 9095685 IRF1 JASPAR yes 70799443
chr19 9095665 9095680 FOXP1 JASPAR yes 70799444
chr19 9095665 9095686 IRF1 JASPAR yes 70799445
chr19 9095666 9095681 FOXP1 JASPAR yes 70799446
chr19 9095666 9095687 IRF1 JASPAR yes 70799447
chr19 9095667 9095682 FOXP1 JASPAR yes 70799448
chr19 9095667 9095688 IRF1 JASPAR yes 70799449
chr19 9095668 9095683 FOXP1 JASPAR yes 70799450
chr19 9095668 9095689 IRF1 JASPAR yes 70799451
chr19 9095669 9095684 FOXP1 JASPAR yes 70799452
chr19 9095670 9095685 FOXP1 JASPAR yes 70799453
chr19 9095671 9095686 FOXP1 JASPAR yes 70799454
chr19 9095671 9095692 IRF1 JASPAR yes 70799455
chr19 9095672 9095687 FOXP1 JASPAR yes 70799456
chr19 9095673 9095688 FOXP1 JASPAR yes 70799457
chr19 9095721 9095734 NR2F1 JASPAR yes 70799458
chr19 9095722 9095730 CREB1 JASPAR yes 70799459
chr19 9095723 9095741 RARA JASPAR yes 70799460
chr19 9095725 9095729 ESR1 TRANSFAC yes 70799461
chr19 9095733 9095753 ESR1 JASPAR yes 70799462
chr19 9095736 9095756 PPARG JASPAR yes 70799463
chr19 9095751 9095763 YY1 JASPAR yes 70799464
chr19 9095755 9095766 CEBPB JASPAR yes 70799465
chr19 9095792 9095807 ZIC3 JASPAR yes 70799466
chr19 9095843 9095858 SOX21 JASPAR yes 70799467
chr19 9095843 9095859 SOX4 JASPAR yes 70799468
chr19 9095866 9095876 SP1 JASPAR yes 70799469
chr19 9095868 9095880 INSM1 JASPAR yes 70799470
chr19 9095882 9095892 TFAP4 JASPAR yes 70799471
chr19 9095933 9095937 NFE TRANSFAC yes 70799472
chr19 9095937 9095952 FOXP1 JASPAR yes 70799473
chr19 9095938 9095953 FOXP1 JASPAR yes 70799474
chr19 9095939 9095954 FOXP1 JASPAR yes 70799475
chr19 9095940 9095955 FOXP1 JASPAR yes 70799476
chr19 9095941 9095956 FOXP1 JASPAR yes 70799477
chr19 9095941 9095962 IRF1 JASPAR yes 70799478
chr19 9095942 9095957 FOXP1 JASPAR yes 70799479
chr19 9095942 9095963 IRF1 JASPAR yes 70799480
chr19 9095943 9095958 FOXP1 JASPAR yes 70799481
SNP sites on vista28529[chr19:9095662-9095964]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 9095664 rs150910615 TAA T
FOXP1 IRF1 TBP
5430638
chr19 9095664 rs869308747 TAA T
FOXP1 IRF1 TBP
5430639
chr19 9095731 rs138018720 G A
NR2F1 RARA
5430640
chr19 9095797 rs11880742 C T
ZIC3
5430641
chr19 9095804 rs147227395 G A
ZIC3
5430642
chr19 9095814 rs138918981 G A no 5430643
chr19 9095882 rs143050191 A G
TFAP4
5430644
chr19 9095928 rs376123904 G A no 5430645
chr19 9095940 rs5827039 C CA,CAA
FOXP1
5430646
Genes possibly regulated by vista28529[chr19:9095662-9095964]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 8959520 9092018 - MUC16 ENSG00000181143.11 9092018 0.96 0.99 16963 96356
Expression level of Genes
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miRNAs possibly regulated by vista28529[chr19:9095662-9095964]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results