EnhancerDB
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  3. vista28548[chr19:9896233-9896620]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28548[chr19:9896233-9896620]
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Tissue distribution of vista28548
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Transcription factor that possibly regulate vista28548[chr19:9896233-9896620]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 9896368 9897241 POLR2A UCSC Txn Factor no Conserved 108382323
chr19 9896444 9896900 PHF8 UCSC Txn Factor no Conserved 108382334
chr19 9896223 9896233 SP1 JASPAR yes 70800281
chr19 9896223 9896233 SP1 JASPAR yes 112391721
chr19 9896224 9896234 SP1 JASPAR yes 70800282
chr19 9896224 9896234 SP1 JASPAR yes 112391723
chr19 9896232 9896236 NFE TRANSFAC yes 70800283
chr19 9896232 9896236 NFE TRANSFAC yes 112391727
chr19 9896252 9896262 SP1 JASPAR yes 70800284
chr19 9896252 9896262 SP1 JASPAR yes 112391728
chr19 9896253 9896259 SP1 TRANSFAC yes 70800285
chr19 9896253 9896259 SP1 TRANSFAC yes 112391729
chr19 9896253 9896263 SP1 JASPAR yes 70800286
chr19 9896253 9896263 SP1 JASPAR yes 112391730
chr19 9896254 9896261 SP1 TRANSFAC yes 70800287
chr19 9896254 9896261 SP1 TRANSFAC yes 112391731
chr19 9896255 9896260 SP1 TRANSFAC yes 70800288
chr19 9896255 9896260 SP1 TRANSFAC yes 112391732
chr19 9896255 9896261 SP1 TRANSFAC yes 70800289
chr19 9896255 9896261 SP1 TRANSFAC yes 112391733
chr19 9896255 9896262 SP1 TRANSFAC yes 70800290
chr19 9896255 9896262 SP1 TRANSFAC yes 112391734
chr19 9896265 9896276 E2F6 JASPAR yes 70800291
chr19 9896265 9896276 E2F6 JASPAR yes 112391735
chr19 9896283 9896288 SP1 TRANSFAC yes 70800292
chr19 9896283 9896288 SP1 TRANSFAC yes 112391736
chr19 9896297 9896317 RREB1 JASPAR yes 70800293
chr19 9896297 9896317 RREB1 JASPAR yes 112391737
chr19 9896308 9896316 SP1 TRANSFAC yes 70800294
chr19 9896308 9896316 SP1 TRANSFAC yes 112391738
chr19 9896308 9896318 SP1 JASPAR yes 70800295
chr19 9896308 9896318 SP1 JASPAR yes 112391739
chr19 9896309 9896315 SP1 TRANSFAC yes 70800296
chr19 9896309 9896315 SP1 TRANSFAC yes 112391740
chr19 9896309 9896319 SP1 JASPAR yes 70800297
chr19 9896309 9896319 SP1 JASPAR yes 112391741
chr19 9896310 9896317 SP1 TRANSFAC yes 70800298
chr19 9896310 9896317 SP1 TRANSFAC yes 112391742
chr19 9896311 9896316 SP1 TRANSFAC yes 70800299
chr19 9896311 9896316 SP1 TRANSFAC yes 112391743
chr19 9896311 9896317 SP1 TRANSFAC yes 70800300
chr19 9896311 9896317 SP1 TRANSFAC yes 112391744
chr19 9896335 9896343 SP1 TRANSFAC yes 70800301
chr19 9896335 9896343 SP1 TRANSFAC yes 112391745
chr19 9896335 9896345 SP1 JASPAR yes 70800302
chr19 9896335 9896345 SP1 JASPAR yes 112391746
chr19 9896336 9896342 SP1 TRANSFAC yes 70800303
chr19 9896336 9896342 SP1 TRANSFAC yes 112391747
chr19 9896336 9896346 SP1 JASPAR yes 70800304
chr19 9896336 9896346 SP1 JASPAR yes 112391748
chr19 9896337 9896344 SP1 TRANSFAC yes 70800305
chr19 9896337 9896344 SP1 TRANSFAC yes 112391749
chr19 9896338 9896343 SP1 TRANSFAC yes 70800306
chr19 9896338 9896343 SP1 TRANSFAC yes 112391750
chr19 9896338 9896344 SP1 TRANSFAC yes 70800307
chr19 9896338 9896344 SP1 TRANSFAC yes 112391751
chr19 9896339 9896359 RREB1 JASPAR yes 70800308
chr19 9896339 9896359 RREB1 JASPAR yes 112391752
chr19 9896347 9896357 MZF1 JASPAR yes 70800309
chr19 9896347 9896357 MZF1 JASPAR yes 112391753
chr19 9896363 9896373 SP1 JASPAR yes 70800310
chr19 9896363 9896373 SP1 JASPAR yes 112391754
chr19 9896365 9896370 SP1 TRANSFAC yes 70800311
chr19 9896365 9896370 SP1 TRANSFAC yes 112391755
chr19 9896365 9896371 SP1 TRANSFAC yes 70800312
chr19 9896365 9896371 SP1 TRANSFAC yes 112391756
chr19 9896365 9896372 SP1 TRANSFAC yes 70800313
chr19 9896365 9896372 SP1 TRANSFAC yes 112391757
chr19 9896367 9896388 ZNF263 JASPAR yes 70800314
chr19 9896367 9896388 ZNF263 JASPAR yes 112391758
chr19 9896379 9896399 RREB1 JASPAR yes 70800315
chr19 9896379 9896399 RREB1 JASPAR yes 112391759
chr19 9896390 9896398 SP1 TRANSFAC yes 70800316
chr19 9896390 9896398 SP1 TRANSFAC yes 112391760
chr19 9896390 9896400 SP1 JASPAR yes 70800317
chr19 9896390 9896400 SP1 JASPAR yes 112391761
chr19 9896391 9896397 SP1 TRANSFAC yes 70800318
chr19 9896391 9896397 SP1 TRANSFAC yes 112391762
chr19 9896391 9896401 SP1 JASPAR yes 70800319
chr19 9896391 9896401 SP1 JASPAR yes 112391763
chr19 9896392 9896399 SP1 TRANSFAC yes 70800320
chr19 9896392 9896399 SP1 TRANSFAC yes 112391764
chr19 9896393 9896398 SP1 TRANSFAC yes 70800321
chr19 9896393 9896398 SP1 TRANSFAC yes 112391765
chr19 9896393 9896399 SP1 TRANSFAC yes 70800322
chr19 9896393 9896399 SP1 TRANSFAC yes 112391766
chr19 9896393 9896400 SP1 TRANSFAC yes 70800323
chr19 9896393 9896400 SP1 TRANSFAC yes 112391767
chr19 9896418 9896428 SP1 JASPAR yes 70800324
chr19 9896418 9896428 SP1 JASPAR yes 112391768
chr19 9896419 9896425 SP1 TRANSFAC yes 70800325
chr19 9896419 9896425 SP1 TRANSFAC yes 112391769
chr19 9896419 9896429 SP1 JASPAR yes 70800326
chr19 9896419 9896429 SP1 JASPAR yes 112391770
chr19 9896420 9896427 SP1 TRANSFAC yes 70800327
chr19 9896420 9896427 SP1 TRANSFAC yes 112391771
chr19 9896421 9896426 SP1 TRANSFAC yes 70800328
chr19 9896421 9896426 SP1 TRANSFAC yes 112391772
chr19 9896421 9896427 SP1 TRANSFAC yes 70800329
chr19 9896421 9896427 SP1 TRANSFAC yes 112391773
chr19 9896421 9896428 SP1 TRANSFAC yes 70800330
chr19 9896421 9896428 SP1 TRANSFAC yes 112391774
chr19 9896423 9896444 ZNF263 JASPAR yes 70800331
chr19 9896423 9896444 ZNF263 JASPAR yes 112391775
chr19 9896451 9896471 RREB1 JASPAR yes 70800332
chr19 9896451 9896471 RREB1 JASPAR yes 112391776
chr19 9896451 9896472 ZNF263 JASPAR yes 70800333
chr19 9896451 9896472 ZNF263 JASPAR yes 112391777
chr19 9896459 9896469 MZF1 JASPAR yes 70800334
chr19 9896459 9896469 MZF1 JASPAR yes 112391778
chr19 9896475 9896485 SP1 JASPAR yes 70800335
chr19 9896475 9896485 SP1 JASPAR yes 112391779
chr19 9896477 9896482 SP1 TRANSFAC yes 70800336
chr19 9896477 9896482 SP1 TRANSFAC yes 112391780
chr19 9896477 9896483 SP1 TRANSFAC yes 70800337
chr19 9896477 9896483 SP1 TRANSFAC yes 112391781
chr19 9896477 9896484 SP1 TRANSFAC yes 70800338
chr19 9896477 9896484 SP1 TRANSFAC yes 112391782
chr19 9896502 9896512 SP1 JASPAR yes 70800339
chr19 9896502 9896512 SP1 JASPAR yes 112391783
chr19 9896503 9896513 SP1 JASPAR yes 70800340
chr19 9896503 9896513 SP1 JASPAR yes 112391784
chr19 9896505 9896515 ZNF740 JASPAR yes 70800341
chr19 9896505 9896515 ZNF740 JASPAR yes 112391785
chr19 9896506 9896516 GCM2 JASPAR yes 70800342
chr19 9896506 9896516 GCM2 JASPAR yes 112391786
chr19 9896507 9896528 ZNF263 JASPAR yes 70800343
chr19 9896507 9896528 ZNF263 JASPAR yes 112391787
chr19 9896508 9896529 ZNF263 JASPAR yes 70800344
chr19 9896508 9896529 ZNF263 JASPAR yes 112391788
chr19 9896526 9896536 SP1 JASPAR yes 70800345
chr19 9896526 9896536 SP1 JASPAR yes 112391789
chr19 9896532 9896542 SP1 JASPAR yes 70800346
chr19 9896532 9896542 SP1 JASPAR yes 112391790
chr19 9896559 9896567 SP1 TRANSFAC yes 70800347
chr19 9896559 9896567 SP1 TRANSFAC yes 112391791
chr19 9896559 9896569 SP1 JASPAR yes 70800348
chr19 9896559 9896569 SP1 JASPAR yes 112391792
chr19 9896560 9896566 SP1 TRANSFAC yes 70800349
chr19 9896560 9896566 SP1 TRANSFAC yes 112391793
chr19 9896560 9896570 SP1 JASPAR yes 70800350
chr19 9896560 9896570 SP1 JASPAR yes 112391794
chr19 9896561 9896568 SP1 TRANSFAC yes 70800351
chr19 9896561 9896568 SP1 TRANSFAC yes 112391795
chr19 9896562 9896567 SP1 TRANSFAC yes 70800352
chr19 9896562 9896567 SP1 TRANSFAC yes 112391796
chr19 9896562 9896568 SP1 TRANSFAC yes 70800353
chr19 9896562 9896568 SP1 TRANSFAC yes 112391797
chr19 9896562 9896569 SP1 TRANSFAC yes 70800354
chr19 9896562 9896569 SP1 TRANSFAC yes 112391798
chr19 9896562 9896583 ZNF263 JASPAR yes 70800355
chr19 9896562 9896583 ZNF263 JASPAR yes 112391799
chr19 9896565 9896579 PLAG1 JASPAR yes 70800356
chr19 9896565 9896579 PLAG1 JASPAR yes 112391800
chr19 9896568 9896581 SMAD2 JASPAR yes 70800357
chr19 9896568 9896581 SMAD2 JASPAR yes 112391801
chr19 9896595 9896604 ZEB1 JASPAR yes 70800358
chr19 9896595 9896604 ZEB1 JASPAR yes 112391802
chr19 9896598 9896603 USF2 TRANSFAC yes 70800359
chr19 9896598 9896603 USF2 TRANSFAC yes 112391803
chr19 9896607 9896616 ZEB1 JASPAR yes 70800360
chr19 9896607 9896616 ZEB1 JASPAR yes 112391804
chr19 9896608 9896618 ID4 JASPAR yes 70800361
chr19 9896608 9896618 TCF3 JASPAR yes 70800362
chr19 9896608 9896618 TCF4 JASPAR yes 70800363
chr19 9896608 9896618 ID4 JASPAR yes 112391805
chr19 9896608 9896618 TCF3 JASPAR yes 112391806
chr19 9896608 9896618 TCF4 JASPAR yes 112391807
chr19 9896610 9896615 USF2 TRANSFAC yes 70800364
chr19 9896610 9896615 USF2 TRANSFAC yes 112391808
SNP sites on vista28548[chr19:9896233-9896620]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 9896372 rs187129771 C T
POLR2A SP1 ZNF263
5432677
chr19 9896379 rs191913048 T G
POLR2A RREB1 ZNF263
5432678
chr19 9896508 rs10413490 A G
GCM2 PHF8 POLR2A SP1 ZNF263 ZNF740
5432679
chr19 9896572 rs116792775 T C
PHF8 PLAG1 POLR2A SMAD2 ZNF263
5432680
chr19 9896584 rs112815671 CG C
PHF8 POLR2A
5432681
chr19 9896603 rs138556081 T A
PHF8 POLR2A USF2 ZEB1
5432682
Genes possibly regulated by vista28548[chr19:9896233-9896620]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 9800600 9811452 - ZNF812 ENSG00000224689.3 9811452 0.96 0.96 16983 15219
chr19 9862669 9903856 - ZNF846 ENSG00000196605.3 9903856 0.81 0.99 16984 92764
chr19 9920943 9938492 - FBXL12 ENSG00000127452.4 9938492 0.82 1.0 16985 58128
chr19 9938568 9940791 + UBL5 ENSG00000198258.6 9938568 0.76 0.99 16986 58052
chr19 9945933 9960358 + PIN1 ENSG00000127445.9 9945933 0.76 0.99 16987 50687
Expression level of Genes
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miRNAs possibly regulated by vista28548[chr19:9896233-9896620]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results