EnhancerDB
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  3. vista28549[chr19:9902440-9902843]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28549[chr19:9902440-9902843]
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Tissue distribution of vista28549
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Transcription factor that possibly regulate vista28549[chr19:9902440-9902843]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 9902290 9902644 CHD2 UCSC Txn Factor no Conserved 108382372
chr19 9902459 9902480 ZNF263 JASPAR yes 70800365
chr19 9902482 9902492 SP1 JASPAR yes 70800366
chr19 9902483 9902489 SP1 TRANSFAC yes 70800367
chr19 9902483 9902493 SP1 JASPAR yes 70800368
chr19 9902484 9902491 SP1 TRANSFAC yes 70800369
chr19 9902485 9902490 SP1 TRANSFAC yes 70800370
chr19 9902485 9902491 SP1 TRANSFAC yes 70800371
chr19 9902485 9902492 SP1 TRANSFAC yes 70800372
chr19 9902486 9902494 WT1 TRANSFAC yes 70800373
chr19 9902489 9902495 SP1 TRANSFAC yes 70800374
chr19 9902489 9902499 SP1 JASPAR yes 70800375
chr19 9902510 9902516 MZF1 JASPAR yes 70800376
chr19 9902511 9902532 ZNF263 JASPAR yes 70800377
chr19 9902519 9902523 NFE TRANSFAC yes 70800378
chr19 9902519 9902532 SMAD2 JASPAR yes 70800379
chr19 9902524 9902539 ZIC3 JASPAR yes 70800380
chr19 9902528 9902542 PLAG1 JASPAR yes 70800381
chr19 9902538 9902546 SP1 TRANSFAC yes 70800382
chr19 9902538 9902548 SP1 JASPAR yes 70800383
chr19 9902539 9902545 SP1 TRANSFAC yes 70800384
chr19 9902539 9902549 SP1 JASPAR yes 70800385
chr19 9902540 9902547 SP1 TRANSFAC yes 70800386
chr19 9902541 9902546 SP1 TRANSFAC yes 70800387
chr19 9902541 9902547 SP1 TRANSFAC yes 70800388
chr19 9902541 9902548 SP1 TRANSFAC yes 70800389
chr19 9902567 9902577 SP1 JASPAR yes 70800390
chr19 9902569 9902574 SP1 TRANSFAC yes 70800391
chr19 9902569 9902575 SP1 TRANSFAC yes 70800392
chr19 9902569 9902576 SP1 TRANSFAC yes 70800393
chr19 9902573 9902583 SP1 JASPAR yes 70800394
chr19 9902596 9902601 SP1 TRANSFAC yes 70800395
chr19 9902596 9902602 SP1 TRANSFAC yes 70800396
chr19 9902599 9902605 SP1 TRANSFAC yes 70800397
chr19 9902599 9902609 SP1 JASPAR yes 70800398
chr19 9902619 9902640 ZNF263 JASPAR yes 70800399
chr19 9902620 9902630 SP1 JASPAR yes 70800400
chr19 9902621 9902627 SP1 TRANSFAC yes 70800401
chr19 9902621 9902631 SP1 JASPAR yes 70800402
chr19 9902622 9902629 SP1 TRANSFAC yes 70800403
chr19 9902623 9902628 SP1 TRANSFAC yes 70800404
chr19 9902623 9902629 SP1 TRANSFAC yes 70800405
chr19 9902623 9902630 SP1 TRANSFAC yes 70800406
chr19 9902624 9902632 WT1 TRANSFAC yes 70800407
chr19 9902627 9902633 SP1 TRANSFAC yes 70800408
chr19 9902627 9902637 SP1 JASPAR yes 70800409
chr19 9902630 9902640 SP1 JASPAR yes 70800410
chr19 9902633 9902643 MZF1 JASPAR yes 70800411
chr19 9902647 9902668 ZNF263 JASPAR yes 70800412
chr19 9902648 9902654 MZF1 JASPAR yes 70800413
chr19 9902649 9902670 ZNF263 JASPAR yes 70800414
chr19 9902658 9902673 PRDM1 JASPAR yes 70800415
chr19 9902676 9902684 SP1 TRANSFAC yes 70800416
chr19 9902676 9902686 SP1 JASPAR yes 70800417
chr19 9902677 9902683 SP1 TRANSFAC yes 70800418
chr19 9902677 9902687 SP1 JASPAR yes 70800419
chr19 9902679 9902684 SP1 TRANSFAC yes 70800420
chr19 9902690 9902706 GLIS1 JASPAR yes 70800421
chr19 9902704 9902725 ZNF263 JASPAR yes 70800422
chr19 9902705 9902713 SP1 TRANSFAC yes 70800423
chr19 9902705 9902715 SP1 JASPAR yes 70800424
chr19 9902706 9902712 SP1 TRANSFAC yes 70800425
chr19 9902706 9902716 SP1 JASPAR yes 70800426
chr19 9902707 9902714 SP1 TRANSFAC yes 70800427
chr19 9902708 9902713 SP1 TRANSFAC yes 70800428
chr19 9902708 9902714 SP1 TRANSFAC yes 70800429
chr19 9902708 9902715 SP1 TRANSFAC yes 70800430
chr19 9902711 9902725 PLAG1 JASPAR yes 70800431
chr19 9902718 9902728 MZF1 JASPAR yes 70800432
chr19 9902735 9902742 SP1 TRANSFAC yes 70800433
chr19 9902736 9902741 SP1 TRANSFAC yes 70800434
chr19 9902736 9902742 SP1 TRANSFAC yes 70800435
chr19 9902745 9902749 NFE TRANSFAC yes 70800436
chr19 9902746 9902751 GATA2 JASPAR yes 70800437
chr19 9902759 9902780 ZNF263 JASPAR yes 70800438
chr19 9902761 9902782 ZNF263 JASPAR yes 70800439
chr19 9902765 9902786 ZNF263 JASPAR yes 70800440
chr19 9902767 9902773 SP1 TRANSFAC yes 70800441
chr19 9902767 9902777 SP1 JASPAR yes 70800442
chr19 9902787 9902808 ZNF263 JASPAR yes 70800443
chr19 9902788 9902798 SP1 JASPAR yes 70800444
chr19 9902789 9902795 SP1 TRANSFAC yes 70800445
chr19 9902789 9902799 SP1 JASPAR yes 70800446
chr19 9902790 9902797 SP1 TRANSFAC yes 70800447
chr19 9902791 9902796 SP1 TRANSFAC yes 70800448
chr19 9902791 9902797 SP1 TRANSFAC yes 70800449
chr19 9902791 9902798 SP1 TRANSFAC yes 70800450
chr19 9902792 9902800 WT1 TRANSFAC yes 70800451
chr19 9902793 9902814 ZNF263 JASPAR yes 70800452
chr19 9902795 9902801 SP1 TRANSFAC yes 70800453
chr19 9902795 9902805 SP1 JASPAR yes 70800454
chr19 9902798 9902808 SP1 JASPAR yes 70800455
chr19 9902801 9902811 MZF1 JASPAR yes 70800456
chr19 9902817 9902838 ZNF263 JASPAR yes 70800457
chr19 9902825 9902829 NFE TRANSFAC yes 70800458
chr19 9902825 9902838 SMAD2 JASPAR yes 70800459
SNP sites on vista28549[chr19:9902440-9902843]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 9902465 rs145393361 C A,G
CHD2 ZNF263
5432737
chr19 9902615 rs572167229 A C
CHD2
5432738
chr19 9902735 rs542702956 A C
SP1
5432739
Genes possibly regulated by vista28549[chr19:9902440-9902843]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 9800600 9811452 - ZNF812 ENSG00000224689.3 9811452 0.96 0.96 16983 9012
chr19 9862669 9903856 - ZNF846 ENSG00000196605.3 9903856 0.81 0.99 16984 98987
chr19 9920943 9938492 - FBXL12 ENSG00000127452.4 9938492 0.82 1.0 16985 64351
chr19 9938568 9940791 + UBL5 ENSG00000198258.6 9938568 0.76 0.99 16986 64275
chr19 9945933 9960358 + PIN1 ENSG00000127445.9 9945933 0.76 0.99 16987 56910
Expression level of Genes
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miRNAs possibly regulated by vista28549[chr19:9902440-9902843]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results