EnhancerDB
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  3. vista28552[chr19:9937602-9937876]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28552[chr19:9937602-9937876]
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Tissue distribution of vista28552
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Transcription factor that possibly regulate vista28552[chr19:9937602-9937876]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 9937614 9937629 NFYB JASPAR yes 70800588
chr19 9937616 9937632 NFYA JASPAR yes 70800589
chr19 9937617 9937635 NFYA JASPAR yes 70800590
chr19 9937617 9937636 PAX5 JASPAR yes 70800591
chr19 9937621 9937625 H1TF2 TRANSFAC yes 70800592
chr19 9937621 9937625 NFE TRANSFAC yes 70800593
chr19 9937621 9937625 SRF TRANSFAC yes 70800594
chr19 9937627 9937640 NFKB1 JASPAR yes 70800595
chr19 9937627 9937640 NFKB2 JASPAR yes 70800596
chr19 9937657 9937676 PAX5 JASPAR yes 70800597
chr19 9937666 9937676 SP1 JASPAR yes 70800598
chr19 9937676 9937681 SP1 TRANSFAC yes 70800599
chr19 9937734 9937744 ELK1 JASPAR yes 70800600
chr19 9937734 9937746 EHF JASPAR yes 70800601
chr19 9937734 9937746 ELF4 JASPAR yes 70800602
chr19 9937734 9937747 ELF3 JASPAR yes 70800603
chr19 9937735 9937746 ELF5 JASPAR yes 70800604
chr19 9937736 9937746 GABPA JASPAR yes 70800605
chr19 9937738 9937744 ETS1 JASPAR yes 70800606
chr19 9937738 9937744 SPI1 JASPAR yes 70800607
chr19 9937740 9937761 ZNF263 JASPAR yes 70800608
chr19 9937742 9937747 SP1 TRANSFAC yes 70800609
chr19 9937742 9937754 HINFP JASPAR yes 70800610
chr19 9937747 9937764 ESR1 JASPAR yes 70800611
chr19 9937747 9937765 ESR2 JASPAR yes 70800612
chr19 9937751 9937760 RUNX2 JASPAR yes 70800613
chr19 9937762 9937776 TLX1 JASPAR yes 70800614
chr19 9937787 9937806 PAX5 JASPAR yes 70800615
chr19 9937813 9937828 FOXP1 JASPAR yes 70800616
chr19 9937814 9937829 FOXP1 JASPAR yes 70800617
chr19 9937814 9937835 IRF1 JASPAR yes 70800618
chr19 9937815 9937830 FOXP1 JASPAR yes 70800619
chr19 9937815 9937836 IRF1 JASPAR yes 70800620
chr19 9937816 9937831 FOXP1 JASPAR yes 70800621
chr19 9937816 9937837 IRF1 JASPAR yes 70800622
chr19 9937817 9937832 FOXP1 JASPAR yes 70800623
chr19 9937818 9937833 FOXP1 JASPAR yes 70800624
chr19 9937818 9937839 IRF1 JASPAR yes 70800625
chr19 9937819 9937834 FOXP1 JASPAR yes 70800626
chr19 9937820 9937841 IRF1 JASPAR yes 70800627
chr19 9937821 9937836 FOXP1 JASPAR yes 70800628
chr19 9937822 9937840 NR3C1 JASPAR yes 70800629
chr19 9937857 9937871 GATA2 JASPAR yes 70800630
chr19 9937861 9937869 GATA3 JASPAR yes 70800631
chr19 9937861 9937869 GATA5 JASPAR yes 70800632
SNP sites on vista28552[chr19:9937602-9937876]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 9937789 rs56754106 T A
PAX5
5432959
chr19 9937816 rs562382165 GA G
FOXP1 IRF1
5432960
chr19 9937816 rs60822985 GA G
FOXP1 IRF1
5432961
chr19 9937838 rs144944770 C T
IRF1 NR3C1
5432962
Genes possibly regulated by vista28552[chr19:9937602-9937876]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 9862669 9903856 - ZNF846 ENSG00000196605.3 9903856 0.81 0.99 16984 66254
chr19 9920943 9938492 - FBXL12 ENSG00000127452.4 9938492 0.82 1.0 16985 99384
chr19 9938568 9940791 + UBL5 ENSG00000198258.6 9938568 0.76 0.99 16986 99308
chr19 9945933 9960358 + PIN1 ENSG00000127445.9 9945933 0.76 0.99 16987 91943
Expression level of Genes
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miRNAs possibly regulated by vista28552[chr19:9937602-9937876]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results