EnhancerDB
  1. Home
  2. Enhancers
  3. vista28556[chr19:9979709-9980000]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28556[chr19:9979709-9980000]
Back to top
Tissue distribution of vista28556
Back to top
Transcription factor that possibly regulate vista28556[chr19:9979709-9980000]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 9979732 9979746 PAX6 JASPAR yes 70800725
chr19 9979732 9979746 PAX6 JASPAR yes 112396106
chr19 9979734 9979751 ZNF410 JASPAR yes 70800726
chr19 9979734 9979751 ZNF410 JASPAR yes 112396107
chr19 9979739 9979749 HOXA13 JASPAR yes 70800727
chr19 9979739 9979749 HOXA13 JASPAR yes 112396108
chr19 9979752 9979770 MAFF JASPAR yes 70800728
chr19 9979752 9979770 MAFF JASPAR yes 112396109
chr19 9979753 9979768 MAFK JASPAR yes 70800729
chr19 9979753 9979768 MAFK JASPAR yes 112396110
chr19 9979755 9979767 POU3F1 JASPAR yes 70800730
chr19 9979755 9979767 POU3F2 JASPAR yes 70800731
chr19 9979755 9979767 POU3F1 JASPAR yes 112396111
chr19 9979755 9979767 POU3F2 JASPAR yes 112396112
chr19 9979755 9979768 POU3F3 JASPAR yes 70800732
chr19 9979755 9979768 POU3F3 JASPAR yes 112396113
chr19 9979756 9979768 POU2F1 JASPAR yes 70800733
chr19 9979756 9979768 POU2F1 JASPAR yes 112396114
chr19 9979757 9979766 POU3F4 JASPAR yes 70800734
chr19 9979757 9979766 POU5F1B JASPAR yes 70800735
chr19 9979757 9979766 POU3F4 JASPAR yes 112396115
chr19 9979757 9979766 POU5F1B JASPAR yes 112396116
chr19 9979757 9979768 NRL JASPAR yes 70800736
chr19 9979757 9979768 NRL JASPAR yes 112396117
chr19 9979759 9979771 BHLHE23 JASPAR yes 70800737
chr19 9979759 9979771 BHLHE23 JASPAR yes 112396118
chr19 9979760 9979770 BHLHE22 JASPAR yes 70800738
chr19 9979760 9979770 NEUROD2 JASPAR yes 70800739
chr19 9979760 9979770 NEUROG2 JASPAR yes 70800740
chr19 9979760 9979770 OLIG1 JASPAR yes 70800741
chr19 9979760 9979770 OLIG2 JASPAR yes 70800742
chr19 9979760 9979770 OLIG3 JASPAR yes 70800743
chr19 9979760 9979770 BHLHE22 JASPAR yes 112396119
chr19 9979760 9979770 NEUROD2 JASPAR yes 112396120
chr19 9979760 9979770 NEUROG2 JASPAR yes 112396121
chr19 9979760 9979770 OLIG1 JASPAR yes 112396122
chr19 9979760 9979770 OLIG2 JASPAR yes 112396123
chr19 9979760 9979770 OLIG3 JASPAR yes 112396124
chr19 9979807 9979828 IRF1 JASPAR yes 70800744
chr19 9979807 9979828 IRF1 JASPAR yes 112396125
chr19 9979810 9979824 IRF7 JASPAR yes 70800745
chr19 9979810 9979824 IRF7 JASPAR yes 112396126
chr19 9979811 9979825 STAT1 JASPAR yes 70800746
chr19 9979811 9979825 STAT1 JASPAR yes 112396127
chr19 9979811 9979826 PRDM1 JASPAR yes 70800747
chr19 9979811 9979826 STAT2 JASPAR yes 70800748
chr19 9979811 9979826 PRDM1 JASPAR yes 112396128
chr19 9979811 9979826 STAT2 JASPAR yes 112396129
chr19 9979811 9979829 IRF2 JASPAR yes 70800749
chr19 9979811 9979829 IRF2 JASPAR yes 112396130
chr19 9979825 9979829 ESR1 TRANSFAC yes 70800750
chr19 9979825 9979829 ESR1 TRANSFAC yes 112396131
chr19 9979828 9979832 YY1 TRANSFAC yes 70800751
chr19 9979828 9979832 YY1 TRANSFAC yes 112396132
chr19 9979863 9979875 TAL1 JASPAR yes 70800752
chr19 9979863 9979875 TAL1 JASPAR yes 112396133
chr19 9979887 9979902 MEF2A JASPAR yes 70800753
chr19 9979887 9979902 MEF2A JASPAR yes 112396134
chr19 9979888 9979903 MEF2C JASPAR yes 70800754
chr19 9979888 9979903 MEF2C JASPAR yes 112396135
chr19 9979889 9979901 MEF2A JASPAR yes 70800755
chr19 9979889 9979901 MEF2B JASPAR yes 70800756
chr19 9979889 9979901 MEF2D JASPAR yes 70800757
chr19 9979889 9979901 MEF2A JASPAR yes 112396136
chr19 9979889 9979901 MEF2B JASPAR yes 112396137
chr19 9979889 9979901 MEF2D JASPAR yes 112396138
chr19 9979890 9979900 MEF2A JASPAR yes 70800758
chr19 9979890 9979900 MEF2A JASPAR yes 112396139
chr19 9979891 9979895 YY1 TRANSFAC yes 70800759
chr19 9979891 9979895 YY1 TRANSFAC yes 112396140
chr19 9979894 9979908 E2F7 JASPAR yes 70800760
chr19 9979894 9979908 E2F7 JASPAR yes 112396141
chr19 9979896 9979902 NFIC JASPAR yes 70800761
chr19 9979896 9979902 NFIC JASPAR yes 112396142
chr19 9979902 9979913 NFKB1 JASPAR yes 70800762
chr19 9979902 9979913 NFKB1 JASPAR yes 112396143
chr19 9979904 9979909 H4TF1 TRANSFAC yes 70800763
chr19 9979904 9979909 H4TF1 TRANSFAC yes 112396144
chr19 9979909 9979925 ZNF143 JASPAR yes 70800764
chr19 9979909 9979925 ZNF143 JASPAR yes 112396145
chr19 9979932 9979946 CREB3 JASPAR yes 70800765
chr19 9979932 9979946 CREB3L1 JASPAR yes 70800766
chr19 9979932 9979946 CREB3 JASPAR yes 112396146
chr19 9979932 9979946 CREB3L1 JASPAR yes 112396147
chr19 9979934 9979944 MLXIPL JASPAR yes 70800767
chr19 9979934 9979944 MLX JASPAR yes 70800768
chr19 9979934 9979944 MNT JASPAR yes 70800769
chr19 9979934 9979944 TFE3 JASPAR yes 70800770
chr19 9979934 9979944 MLXIPL JASPAR yes 112396148
chr19 9979934 9979944 MLX JASPAR yes 112396149
chr19 9979934 9979944 MNT JASPAR yes 112396150
chr19 9979934 9979944 TFE3 JASPAR yes 112396151
chr19 9979935 9979942 USF1 JASPAR yes 70800771
chr19 9979935 9979942 USF1 JASPAR yes 112396152
chr19 9979935 9979945 MAX JASPAR yes 70800772
chr19 9979935 9979945 MAX JASPAR yes 112396153
chr19 9979935 9979950 JUND JASPAR yes 70800773
chr19 9979935 9979950 JUND JASPAR yes 112396154
chr19 9979936 9979941 MYC TRANSFAC yes 70800774
chr19 9979936 9979941 USF1 TRANSFAC yes 70800775
chr19 9979936 9979941 USF2 TRANSFAC yes 70800776
chr19 9979936 9979941 MYC TRANSFAC yes 112396155
chr19 9979936 9979941 USF1 TRANSFAC yes 112396156
chr19 9979936 9979941 USF2 TRANSFAC yes 112396157
chr19 9979936 9979949 JUN JASPAR yes 70800777
chr19 9979936 9979949 JUN JASPAR yes 112396158
chr19 9979937 9979951 ATF7 JASPAR yes 70800778
chr19 9979937 9979951 BATF3 JASPAR yes 70800779
chr19 9979937 9979951 ATF7 JASPAR yes 112396159
chr19 9979937 9979951 BATF3 JASPAR yes 112396160
chr19 9979938 9979950 JDP2 JASPAR yes 70800780
chr19 9979938 9979950 JDP2 JASPAR yes 112396161
chr19 9979938 9979953 JUND JASPAR yes 70800781
chr19 9979938 9979953 JUND JASPAR yes 112396162
chr19 9979958 9979967 THAP1 JASPAR yes 70800782
chr19 9979958 9979967 THAP1 JASPAR yes 112396163
chr19 9979961 9979965 LFA1 TRANSFAC yes 70800783
chr19 9979961 9979965 LFA1 TRANSFAC yes 112396164
chr19 9979967 9979972 GATA2 JASPAR yes 70800784
chr19 9979967 9979972 GATA2 JASPAR yes 112396165
chr19 9979992 9979999 SPIB JASPAR yes 70800785
chr19 9979992 9979999 SPIB JASPAR yes 112396166
chr19 9979994 9980009 HSF1 JASPAR yes 70800786
chr19 9979994 9980009 HSF1 JASPAR yes 112396167
chr19 9979995 9980008 HSF1 JASPAR yes 70800787
chr19 9979995 9980008 HSF2 JASPAR yes 70800788
chr19 9979995 9980008 HSF4 JASPAR yes 70800789
chr19 9979995 9980008 HSF1 JASPAR yes 112396168
chr19 9979995 9980008 HSF2 JASPAR yes 112396169
chr19 9979995 9980008 HSF4 JASPAR yes 112396170
SNP sites on vista28556[chr19:9979709-9980000]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 9979767 rs573405023 T C
BHLHE22 BHLHE23 MAFF MAFK NEUROD2 NEUROG2 NRL OLIG1 OLIG2 OLIG3 POU2F1 POU3F1 POU3F2 POU3F3
5433179
chr19 9979944 rs562519090 T C
ATF7 BATF3 CREB3 CREB3L1 JDP2 JUN JUND MAX MLX MLXIPL MNT TFE3
5433180
Genes possibly regulated by vista28556[chr19:9979709-9980000]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 9862669 9903856 - ZNF846 ENSG00000196605.3 9903856 0.81 0.99 16984 24147
chr19 9920943 9938492 - FBXL12 ENSG00000127452.4 9938492 0.82 1.0 16985 58783
chr19 9938568 9940791 + UBL5 ENSG00000198258.6 9938568 0.76 0.99 16986 58859
chr19 9945933 9960358 + PIN1 ENSG00000127445.9 9945933 0.76 0.99 16987 66224
chr19 9964394 10047228 - OLFM2 ENSG00000105088.4 10047228 0.67 1.0 16988 32772
Expression level of Genes
Back to top
miRNAs possibly regulated by vista28556[chr19:9979709-9980000]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results