EnhancerDB
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  3. vista28558[chr19:10056236-10056512]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28558[chr19:10056236-10056512]
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Tissue distribution of vista28558
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Transcription factor that possibly regulate vista28558[chr19:10056236-10056512]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 10056109 10056521 MAX UCSC Txn Factor no Conserved 108382459
chr19 10056239 10056254 NR2C2 JASPAR yes 70800904
chr19 10056239 10056254 NR2C2 JASPAR yes 112403139
chr19 10056265 10056281 ZNF143 JASPAR yes 70800905
chr19 10056265 10056281 ZNF143 JASPAR yes 112403140
chr19 10056267 10056271 LFA1 TRANSFAC yes 70800906
chr19 10056267 10056271 LFA1 TRANSFAC yes 112403141
chr19 10056278 10056299 ZNF263 JASPAR yes 70800907
chr19 10056278 10056299 ZNF263 JASPAR yes 112403142
chr19 10056289 10056310 ZNF263 JASPAR yes 70800908
chr19 10056289 10056310 ZNF263 JASPAR yes 112403143
chr19 10056291 10056302 E2F6 JASPAR yes 70800909
chr19 10056291 10056302 E2F6 JASPAR yes 112403144
chr19 10056293 10056314 ZNF263 JASPAR yes 70800910
chr19 10056293 10056314 ZNF263 JASPAR yes 112403145
chr19 10056308 10056322 JUN JASPAR yes 70800911
chr19 10056308 10056322 JUN JASPAR yes 112403146
chr19 10056310 10056321 BATF JASPAR yes 70800912
chr19 10056310 10056321 BATF JASPAR yes 112403147
chr19 10056311 10056322 FOSL2 JASPAR yes 70800913
chr19 10056311 10056322 JUNB JASPAR yes 70800914
chr19 10056311 10056322 FOSL2 JASPAR yes 112403148
chr19 10056311 10056322 JUNB JASPAR yes 112403149
chr19 10056312 10056323 FOS JASPAR yes 70800915
chr19 10056312 10056323 FOSL1 JASPAR yes 70800916
chr19 10056312 10056323 JUND JASPAR yes 70800917
chr19 10056312 10056323 NFE2 JASPAR yes 70800918
chr19 10056312 10056323 FOS JASPAR yes 112403150
chr19 10056312 10056323 FOSL1 JASPAR yes 112403151
chr19 10056312 10056323 JUND JASPAR yes 112403152
chr19 10056312 10056323 NFE2 JASPAR yes 112403153
chr19 10056313 10056322 JDP2 JASPAR yes 70800919
chr19 10056313 10056322 JDP2 JASPAR yes 112403154
chr19 10056328 10056339 EBF1 JASPAR yes 70800920
chr19 10056328 10056339 EBF1 JASPAR yes 112403155
chr19 10056333 10056343 SP1 JASPAR yes 70800921
chr19 10056333 10056343 SP1 JASPAR yes 112403156
chr19 10056333 10056354 ZNF263 JASPAR yes 70800922
chr19 10056333 10056354 ZNF263 JASPAR yes 112403157
chr19 10056336 10056346 SP1 JASPAR yes 70800923
chr19 10056336 10056346 SP1 JASPAR yes 112403158
chr19 10056336 10056357 ZNF263 JASPAR yes 70800924
chr19 10056336 10056357 ZNF263 JASPAR yes 112403159
chr19 10056339 10056360 ZNF263 JASPAR yes 70800925
chr19 10056339 10056360 ZNF263 JASPAR yes 112403160
chr19 10056340 10056347 CEBPA TRANSFAC yes 70800926
chr19 10056340 10056347 CEBPA TRANSFAC yes 112403161
chr19 10056340 10056361 ZNF263 JASPAR yes 70800927
chr19 10056340 10056361 ZNF263 JASPAR yes 112403162
chr19 10056341 10056352 E2F6 JASPAR yes 70800928
chr19 10056341 10056352 E2F6 JASPAR yes 112403163
chr19 10056343 10056364 ZNF263 JASPAR yes 70800929
chr19 10056343 10056364 ZNF263 JASPAR yes 112403164
chr19 10056344 10056365 ZNF263 JASPAR yes 70800930
chr19 10056344 10056365 ZNF263 JASPAR yes 112403165
chr19 10056345 10056350 ETS2 TRANSFAC yes 70800931
chr19 10056345 10056350 ETS2 TRANSFAC yes 112403166
chr19 10056345 10056357 INSM1 JASPAR yes 70800932
chr19 10056345 10056357 INSM1 JASPAR yes 112403167
chr19 10056347 10056357 MZF1 JASPAR yes 70800933
chr19 10056347 10056357 MZF1 JASPAR yes 112403168
chr19 10056349 10056364 NR2C2 JASPAR yes 70800934
chr19 10056349 10056364 NR2C2 JASPAR yes 112403169
chr19 10056350 10056360 SP1 JASPAR yes 70800935
chr19 10056350 10056360 SP1 JASPAR yes 112403170
chr19 10056354 10056361 CEBPA TRANSFAC yes 70800936
chr19 10056354 10056361 CEBPA TRANSFAC yes 112403171
chr19 10056359 10056363 LFA1 TRANSFAC yes 70800937
chr19 10056359 10056363 LFA1 TRANSFAC yes 112403172
chr19 10056374 10056384 MAX JASPAR yes 70800938
chr19 10056374 10056384 MAX JASPAR yes 112403173
chr19 10056391 10056396 SP1 TRANSFAC yes 70800939
chr19 10056391 10056396 SP1 TRANSFAC yes 112403174
chr19 10056401 10056415 PAX6 JASPAR yes 70800940
chr19 10056401 10056415 PAX6 JASPAR yes 112403175
chr19 10056411 10056432 ZNF263 JASPAR yes 70800941
chr19 10056411 10056432 ZNF263 JASPAR yes 112403176
chr19 10056417 10056422 SP1 TRANSFAC yes 70800942
chr19 10056417 10056422 SP1 TRANSFAC yes 112403177
chr19 10056419 10056437 ESR2 JASPAR yes 70800943
chr19 10056419 10056437 ESR2 JASPAR yes 112403178
chr19 10056420 10056435 ESR2 JASPAR yes 70800944
chr19 10056420 10056435 ESR2 JASPAR yes 112403179
chr19 10056420 10056440 ESR1 JASPAR yes 70800945
chr19 10056420 10056440 ESR1 JASPAR yes 112403180
chr19 10056457 10056470 ELF1 JASPAR yes 70800946
chr19 10056457 10056470 ELF1 JASPAR yes 112403181
chr19 10056458 10056471 ELF3 JASPAR yes 70800947
chr19 10056458 10056471 ELF3 JASPAR yes 112403182
chr19 10056460 10056471 FLI1 JASPAR yes 70800948
chr19 10056460 10056471 FLI1 JASPAR yes 112403183
chr19 10056461 10056469 EHF JASPAR yes 70800949
chr19 10056461 10056469 EHF JASPAR yes 112403184
chr19 10056478 10056492 NR2F1 JASPAR yes 70800950
chr19 10056478 10056492 NR2F1 JASPAR yes 112403185
chr19 10056496 10056506 ELK1 JASPAR yes 70800951
chr19 10056496 10056506 ELK3 JASPAR yes 70800952
chr19 10056496 10056506 ELK1 JASPAR yes 112403186
chr19 10056496 10056506 ELK3 JASPAR yes 112403187
chr19 10056504 10056518 TLX1 JASPAR yes 70800953
chr19 10056504 10056518 TLX1 JASPAR yes 112403188
SNP sites on vista28558[chr19:10056236-10056512]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 10056320 rs80076900 C T
BATF FOS FOSL1 FOSL2 JDP2 JUN JUNB JUND MAX NFE2
5433910
chr19 10056385 rs10425175 C T
MAX
5433911
chr19 10056496 rs117088198 G A
ELK1 ELK3 MAX
5433912
Genes possibly regulated by vista28558[chr19:10056236-10056512]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 9964394 10047228 - OLFM2 ENSG00000105088.4 10047228 0.67 1.0 16988 90992
chr19 10070237 10121147 - COL5A3 ENSG00000080573.6 10121147 0.83 0.99 16989 35365
chr19 10123925 10132955 + RDH8 ENSG00000080511.2 10123925 0.94 1.0 16990 32587
Expression level of Genes
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miRNAs possibly regulated by vista28558[chr19:10056236-10056512]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr19 10149067 10149089 + hsa-miR-5589-3p MIMAT0022298 10148274 0.1731440643888864 0.0 0.0 813
Expression level of miRNAs
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