EnhancerDB
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  3. vista28559[chr19:10120163-10120467]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28559[chr19:10120163-10120467]
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Tissue distribution of vista28559
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Transcription factor that possibly regulate vista28559[chr19:10120163-10120467]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 10120029 10120499 REST UCSC Txn Factor no Conserved 108382705
chr19 10120163 10120168 TFAP2A TRANSFAC yes 70800954
chr19 10120163 10120169 MZF1 JASPAR yes 70800955
chr19 10120163 10120173 SP1 JASPAR yes 70800956
chr19 10120164 10120174 SP1 JASPAR yes 70800957
chr19 10120165 10120171 MAZ TRANSFAC yes 70800958
chr19 10120165 10120175 SP1 JASPAR yes 70800959
chr19 10120166 10120176 MZF1 JASPAR yes 70800960
chr19 10120166 10120176 SP1 JASPAR yes 70800961
chr19 10120166 10120176 ZNF740 JASPAR yes 70800962
chr19 10120167 10120177 ZNF740 JASPAR yes 70800963
chr19 10120190 10120196 NFE2 TRANSFAC yes 70800964
chr19 10120193 10120199 SP1 TRANSFAC yes 70800965
chr19 10120195 10120200 SP1 TRANSFAC yes 70800966
chr19 10120195 10120209 PLAG1 JASPAR yes 70800967
chr19 10120204 10120213 SP1 TRANSFAC yes 70800968
chr19 10120205 10120211 SP1 TRANSFAC yes 70800969
chr19 10120205 10120215 SP1 JASPAR yes 70800970
chr19 10120206 10120213 SP1 TRANSFAC yes 70800971
chr19 10120207 10120212 SP1 TRANSFAC yes 70800972
chr19 10120207 10120213 SP1 TRANSFAC yes 70800973
chr19 10120212 10120225 SMAD2 JASPAR yes 70800974
chr19 10120229 10120238 SP1 TRANSFAC yes 70800975
chr19 10120230 10120246 GLIS1 JASPAR yes 70800976
chr19 10120243 10120264 REST JASPAR yes 70800977
chr19 10120244 10120263 REST JASPAR yes 70800978
chr19 10120247 10120251 NFE TRANSFAC yes 70800979
chr19 10120268 10120279 EBF1 JASPAR yes 70800980
chr19 10120272 10120277 TFAP2A TRANSFAC yes 70800981
chr19 10120272 10120278 MZF1 JASPAR yes 70800982
chr19 10120272 10120293 ZNF263 JASPAR yes 70800983
chr19 10120283 10120300 RXRA JASPAR yes 70800984
chr19 10120284 10120289 SP1 TRANSFAC yes 70800985
chr19 10120285 10120295 ZNF740 JASPAR yes 70800986
chr19 10120285 10120300 NR2C2 JASPAR yes 70800987
chr19 10120287 10120296 SP1 TRANSFAC yes 70800988
chr19 10120287 10120297 SP1 JASPAR yes 70800989
chr19 10120287 10120308 ZNF263 JASPAR yes 70800990
chr19 10120288 10120298 SP1 JASPAR yes 70800991
chr19 10120289 10120295 MAZ TRANSFAC yes 70800992
chr19 10120293 10120307 PLAG1 JASPAR yes 70800993
chr19 10120293 10120314 ZNF263 JASPAR yes 70800994
chr19 10120294 10120315 ZNF263 JASPAR yes 70800995
chr19 10120295 10120299 LFA1 TRANSFAC yes 70800996
chr19 10120301 10120322 ZNF263 JASPAR yes 70800997
chr19 10120303 10120309 MAZ TRANSFAC yes 70800998
chr19 10120303 10120314 E2F6 JASPAR yes 70800999
chr19 10120304 10120325 ZNF263 JASPAR yes 70801000
chr19 10120305 10120313 SP1 TRANSFAC yes 70801001
chr19 10120305 10120315 SP1 JASPAR yes 70801002
chr19 10120305 10120326 ZNF263 JASPAR yes 70801003
chr19 10120307 10120313 MAZ TRANSFAC yes 70801004
chr19 10120321 10120335 TLX1 JASPAR yes 70801005
chr19 10120331 10120335 H1TF2 TRANSFAC yes 70801006
chr19 10120331 10120335 NFE TRANSFAC yes 70801007
chr19 10120331 10120335 SRF TRANSFAC yes 70801008
chr19 10120337 10120358 ZNF263 JASPAR yes 70801009
chr19 10120338 10120359 ZNF263 JASPAR yes 70801010
chr19 10120339 10120343 LFA1 TRANSFAC yes 70801011
chr19 10120343 10120364 ZNF263 JASPAR yes 70801012
chr19 10120346 10120352 PEA3 TRANSFAC yes 70801013
chr19 10120346 10120367 ZNF263 JASPAR yes 70801014
chr19 10120350 10120365 PRDM1 JASPAR yes 70801015
chr19 10120361 10120371 SREBF2 JASPAR yes 70801016
chr19 10120373 10120377 YY1 TRANSFAC yes 70801017
chr19 10120385 10120399 STAT1 JASPAR yes 70801018
chr19 10120389 10120394 ETS2 TRANSFAC yes 70801019
chr19 10120412 10120429 ZNF410 JASPAR yes 70801020
chr19 10120414 10120424 ZNF740 JASPAR yes 70801021
chr19 10120415 10120425 ZNF740 JASPAR yes 70801022
chr19 10120420 10120424 H1TF2 TRANSFAC yes 70801023
chr19 10120420 10120424 NFE TRANSFAC yes 70801024
chr19 10120420 10120424 SRF TRANSFAC yes 70801025
chr19 10120430 10120436 MZF1 JASPAR yes 70801026
chr19 10120431 10120441 SP1 JASPAR yes 70801027
chr19 10120431 10120452 ZNF263 JASPAR yes 70801028
chr19 10120453 10120457 LFA1 TRANSFAC yes 70801029
chr19 10120460 10120464 YY1 TRANSFAC yes 70801030
SNP sites on vista28559[chr19:10120163-10120467]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 10120169 rs558986442 A G,T
MAZ MZF1 REST SP1 ZNF740
5434154
chr19 10120194 rs2011202 C T
NFE2 REST SP1
5434155
chr19 10120244 rs12973094 A G
GLIS1 REST
5434156
chr19 10120448 rs564647867 C A,T
REST ZNF263
5434157
Genes possibly regulated by vista28559[chr19:10120163-10120467]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 9964394 10047228 - OLFM2 ENSG00000105088.4 10047228 0.67 1.0 16988 27065
chr19 10070237 10121147 - COL5A3 ENSG00000080573.6 10121147 0.83 0.99 16989 99320
chr19 10123925 10132955 + RDH8 ENSG00000080511.2 10123925 0.94 1.0 16990 96542
chr19 10196798 10203928 + C19orf66 ENSG00000130813.13 10196798 0.84 1.0 16991 23669
chr19 10203014 10213472 - ANGPTL6 ENSG00000130812.6 10213472 0.95 1.0 16992 6995
chr19 10216899 10225456 + PPAN-P2RY11 ENSG00000243207.2 10216899 0.87 0.85 16993 3568
chr19 10216965 10225414 + PPAN ENSG00000130810.15 10216965 0.83 0.91 16994 3502
Expression level of Genes
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miRNAs possibly regulated by vista28559[chr19:10120163-10120467]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results