EnhancerDB
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  3. vista2856[chr1:109937534-109937767]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista2856[chr1:109937534-109937767]
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Tissue distribution of vista2856
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Transcription factor that possibly regulate vista2856[chr1:109937534-109937767]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 109937536 109937550 GATA2 JASPAR yes 31426104
chr1 109937536 109937550 GATA2 JASPAR yes 118347078
chr1 109937553 109937557 NFE TRANSFAC yes 31426105
chr1 109937553 109937557 NFE TRANSFAC yes 118347079
chr1 109937571 109937575 YY1 TRANSFAC yes 31426106
chr1 109937571 109937575 YY1 TRANSFAC yes 118347080
chr1 109937586 109937590 TEAD2 TRANSFAC yes 31426107
chr1 109937586 109937590 TEAD2 TRANSFAC yes 118347081
chr1 109937586 109937591 TBP TRANSFAC yes 31426108
chr1 109937586 109937591 TBP TRANSFAC yes 118347082
chr1 109937586 109937596 BARHL2 JASPAR yes 31426109
chr1 109937586 109937596 BARHL2 JASPAR yes 118347083
chr1 109937593 109937597 H4TF2 TRANSFAC yes 31426110
chr1 109937593 109937597 H4TF2 TRANSFAC yes 118347084
chr1 109937593 109937608 MEF2C JASPAR yes 31426111
chr1 109937593 109937608 MEF2C JASPAR yes 118347085
chr1 109937594 109937609 MEF2A JASPAR yes 31426112
chr1 109937594 109937609 MEF2A JASPAR yes 118347086
chr1 109937632 109937642 HOXA13 JASPAR yes 31426113
chr1 109937632 109937642 HOXC10 JASPAR yes 31426114
chr1 109937632 109937642 HOXD11 JASPAR yes 31426115
chr1 109937632 109937642 HOXD13 JASPAR yes 31426116
chr1 109937632 109937642 HOXA13 JASPAR yes 118347087
chr1 109937632 109937642 HOXC10 JASPAR yes 118347088
chr1 109937632 109937642 HOXD11 JASPAR yes 118347089
chr1 109937632 109937642 HOXD13 JASPAR yes 118347090
chr1 109937632 109937643 HOXA10 JASPAR yes 31426117
chr1 109937632 109937643 HOXC11 JASPAR yes 31426118
chr1 109937632 109937643 HOXC12 JASPAR yes 31426119
chr1 109937632 109937643 HOXD12 JASPAR yes 31426120
chr1 109937632 109937643 HOXA10 JASPAR yes 118347091
chr1 109937632 109937643 HOXC11 JASPAR yes 118347092
chr1 109937632 109937643 HOXC12 JASPAR yes 118347093
chr1 109937632 109937643 HOXD12 JASPAR yes 118347094
chr1 109937633 109937642 CDX1 JASPAR yes 31426121
chr1 109937633 109937642 CDX1 JASPAR yes 118347095
chr1 109937633 109937644 CDX2 JASPAR yes 31426122
chr1 109937633 109937644 CDX2 JASPAR yes 118347096
chr1 109937648 109937660 FOXI1 JASPAR yes 31426123
chr1 109937648 109937660 FOXI1 JASPAR yes 118347097
chr1 109937651 109937663 FOXC2 JASPAR yes 31426124
chr1 109937651 109937663 FOXC2 JASPAR yes 118347098
chr1 109937652 109937664 FOXI1 JASPAR yes 31426125
chr1 109937652 109937664 FOXI1 JASPAR yes 118347099
chr1 109937653 109937668 FOXP1 JASPAR yes 31426126
chr1 109937653 109937668 FOXP1 JASPAR yes 118347100
chr1 109937654 109937665 FOXA1 JASPAR yes 31426127
chr1 109937654 109937665 FOXA1 JASPAR yes 118347101
chr1 109937654 109937669 FOXA1 JASPAR yes 31426128
chr1 109937654 109937669 FOXA1 JASPAR yes 118347102
chr1 109937655 109937666 FOXC1 JASPAR yes 31426129
chr1 109937655 109937666 FOXC1 JASPAR yes 118347103
chr1 109937655 109937667 FOXC2 JASPAR yes 31426130
chr1 109937655 109937667 FOXC2 JASPAR yes 118347104
chr1 109937656 109937667 FOXP2 JASPAR yes 31426131
chr1 109937656 109937667 FOXP2 JASPAR yes 118347105
chr1 109937656 109937668 FOXI1 JASPAR yes 31426132
chr1 109937656 109937668 FOXI1 JASPAR yes 118347106
chr1 109937675 109937686 NFIL3 JASPAR yes 31426133
chr1 109937675 109937686 NFIL3 JASPAR yes 118347107
chr1 109937676 109937688 TEF JASPAR yes 31426134
chr1 109937676 109937688 TEF JASPAR yes 118347108
chr1 109937681 109937690 SRY JASPAR yes 31426135
chr1 109937681 109937690 SRY JASPAR yes 118347109
chr1 109937683 109937686 MYB TRANSFAC yes 31426136
chr1 109937683 109937686 MYB TRANSFAC yes 118347110
chr1 109937691 109937701 HMBOX1 JASPAR yes 31426137
chr1 109937691 109937701 HMBOX1 JASPAR yes 118347111
chr1 109937711 109937714 MYB TRANSFAC yes 31426138
chr1 109937711 109937714 MYB TRANSFAC yes 118347112
chr1 109937715 109937719 YY1 TRANSFAC yes 31426139
chr1 109937715 109937719 YY1 TRANSFAC yes 118347113
chr1 109937735 109937744 SRY JASPAR yes 31426140
chr1 109937735 109937744 SRY JASPAR yes 118347114
chr1 109937739 109937745 SOX10 JASPAR yes 118347115
chr1 109937746 109937767 IRF1 JASPAR yes 118347116
chr1 109937748 109937763 PRDM1 JASPAR yes 118347117
chr1 109937748 109937763 STAT2 JASPAR yes 118347118
chr1 109937751 109937766 FOXP1 JASPAR yes 118347119
chr1 109937752 109937767 FOXP1 JASPAR yes 118347120
SNP sites on vista2856[chr1:109937534-109937767]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista2856[chr1:109937534-109937767]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 109834987 109849663 - MYBPHL ENSG00000221986.2 109849663 1.0 0.98 974 12129
chr1 109852192 109940573 - SORT1 ENSG00000134243.7 109940573 0.79 0.98 975 97194
chr1 109941653 109969062 - PSMA5 ENSG00000143106.8 109969062 0.86 1.0 976 68705
chr1 110009180 110024759 + SYPL2 ENSG00000143028.7 110009180 0.79 1.0 977 28587
chr1 110026101 110035426 + ATXN7L2 ENSG00000162650.11 110026101 0.75 1.0 978 11666
chr1 110036674 110045554 + CYB561D1 ENSG00000174151.10 110036674 0.59 0.99 979 1093
Expression level of Genes
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miRNAs possibly regulated by vista2856[chr1:109937534-109937767]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results