EnhancerDB
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  3. vista28562[chr19:10148640-10148857]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28562[chr19:10148640-10148857]
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Tissue distribution of vista28562
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Transcription factor that possibly regulate vista28562[chr19:10148640-10148857]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 10148666 10148677 NFKB1 JASPAR yes 70801099
chr19 10148666 10148677 NFKB1 JASPAR yes 112406560
chr19 10148666 10148679 NFKB1 JASPAR yes 70801100
chr19 10148666 10148679 NFKB2 JASPAR yes 70801101
chr19 10148666 10148679 NFKB1 JASPAR yes 112406561
chr19 10148666 10148679 NFKB2 JASPAR yes 112406562
chr19 10148667 10148677 NFKB1 JASPAR yes 70801102
chr19 10148667 10148677 RELA JASPAR yes 70801103
chr19 10148667 10148677 NFKB1 JASPAR yes 112406563
chr19 10148667 10148677 RELA JASPAR yes 112406564
chr19 10148667 10148678 NFKB1 JASPAR yes 70801104
chr19 10148667 10148678 NFKB1 JASPAR yes 112406565
chr19 10148669 10148683 SPIC JASPAR yes 70801105
chr19 10148669 10148683 SPIC JASPAR yes 112406566
chr19 10148673 10148679 MZF1 JASPAR yes 70801106
chr19 10148673 10148679 MZF1 JASPAR yes 112406567
chr19 10148674 10148685 EBF1 JASPAR yes 70801107
chr19 10148674 10148685 EBF1 JASPAR yes 112406568
chr19 10148691 10148701 NFIA JASPAR yes 70801108
chr19 10148691 10148701 NFIA JASPAR yes 112406569
chr19 10148692 10148701 NFIX JASPAR yes 70801109
chr19 10148692 10148701 NFIX JASPAR yes 112406570
chr19 10148693 10148699 NFIC JASPAR yes 70801110
chr19 10148693 10148699 NFIC JASPAR yes 112406571
chr19 10148693 10148707 TLX1 JASPAR yes 70801111
chr19 10148693 10148707 TLX1 JASPAR yes 112406572
chr19 10148694 10148708 TLX1 JASPAR yes 70801112
chr19 10148694 10148708 TLX1 JASPAR yes 112406573
chr19 10148719 10148730 ELF5 JASPAR yes 70801113
chr19 10148719 10148730 ELF5 JASPAR yes 112406574
chr19 10148742 10148754 PKNOX1 JASPAR yes 70801114
chr19 10148742 10148754 PKNOX2 JASPAR yes 70801115
chr19 10148742 10148754 PKNOX1 JASPAR yes 112406575
chr19 10148742 10148754 PKNOX2 JASPAR yes 112406576
chr19 10148743 10148753 ID4 JASPAR yes 70801116
chr19 10148743 10148753 TCF3 JASPAR yes 70801117
chr19 10148743 10148753 TCF4 JASPAR yes 70801118
chr19 10148743 10148753 ID4 JASPAR yes 112406577
chr19 10148743 10148753 TCF3 JASPAR yes 112406578
chr19 10148743 10148753 TCF4 JASPAR yes 112406579
chr19 10148744 10148753 SNAI2 JASPAR yes 70801119
chr19 10148744 10148753 SNAI2 JASPAR yes 112406580
chr19 10148745 10148750 USF2 TRANSFAC yes 70801120
chr19 10148745 10148750 USF2 TRANSFAC yes 112406581
chr19 10148755 10148760 SP1 TRANSFAC yes 70801121
chr19 10148755 10148760 SP1 TRANSFAC yes 112406582
chr19 10148758 10148771 SMAD2 JASPAR yes 70801122
chr19 10148758 10148771 SMAD2 JASPAR yes 112406583
chr19 10148760 10148768 MEIS3 JASPAR yes 70801123
chr19 10148760 10148768 MEIS3 JASPAR yes 112406584
chr19 10148766 10148778 TEAD1 JASPAR yes 70801124
chr19 10148766 10148778 TEAD1 JASPAR yes 112406585
chr19 10148768 10148778 TEAD1 JASPAR yes 70801125
chr19 10148768 10148778 TEAD4 JASPAR yes 70801126
chr19 10148768 10148778 TEAD1 JASPAR yes 112406586
chr19 10148768 10148778 TEAD4 JASPAR yes 112406587
chr19 10148769 10148777 TEAD3 JASPAR yes 70801127
chr19 10148769 10148777 TEF-1 TRANSFAC yes 70801128
chr19 10148769 10148777 TEAD3 JASPAR yes 112406588
chr19 10148769 10148777 TEF-1 TRANSFAC yes 112406589
chr19 10148772 10148782 TBX21 JASPAR yes 70801129
chr19 10148772 10148782 TBX21 JASPAR yes 112406590
chr19 10148772 10148785 EOMES JASPAR yes 70801130
chr19 10148772 10148785 EOMES JASPAR yes 112406591
chr19 10148790 10148804 RXRB JASPAR yes 70801131
chr19 10148790 10148804 RXRB JASPAR yes 112406592
chr19 10148795 10148813 MAFF JASPAR yes 70801132
chr19 10148795 10148813 MAFF JASPAR yes 112406593
chr19 10148796 10148811 MAFK JASPAR yes 70801133
chr19 10148796 10148811 MAFK JASPAR yes 112406594
chr19 10148799 10148803 ESR1 TRANSFAC yes 70801134
chr19 10148799 10148803 ESR1 TRANSFAC yes 112406595
chr19 10148800 10148811 NRL JASPAR yes 70801135
chr19 10148800 10148811 NRL JASPAR yes 112406596
chr19 10148802 10148813 CDX2 JASPAR yes 70801136
chr19 10148802 10148813 CDX2 JASPAR yes 112406597
chr19 10148804 10148813 CDX1 JASPAR yes 70801137
chr19 10148804 10148813 CDX1 JASPAR yes 112406598
chr19 10148821 10148825 LFA1 TRANSFAC yes 70801138
chr19 10148821 10148825 LFA1 TRANSFAC yes 112406599
chr19 10148832 10148836 NFE TRANSFAC yes 70801139
chr19 10148832 10148836 NFE TRANSFAC yes 112406600
chr19 10148845 10148853 GATA3 JASPAR yes 70801140
chr19 10148845 10148853 GATA3 JASPAR yes 112406601
chr19 10148851 10148866 HNF4G JASPAR yes 70801141
chr19 10148851 10148866 HNF4G JASPAR yes 112406602
SNP sites on vista28562[chr19:10148640-10148857]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 10148658 rs145155033 C G no 5434325
chr19 10148713 rs16997771 T C no 5434326
chr19 10148725 rs181954701 G A
ELF5
5434327
chr19 10148815 rs377655494 T C no 5434328
Genes possibly regulated by vista28562[chr19:10148640-10148857]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 10070237 10121147 - COL5A3 ENSG00000080573.6 10121147 0.83 0.99 16989 72507
chr19 10123925 10132955 + RDH8 ENSG00000080511.2 10123925 0.94 1.0 16990 75285
chr19 10196798 10203928 + C19orf66 ENSG00000130813.13 10196798 0.84 1.0 16991 52059
chr19 10203014 10213472 - ANGPTL6 ENSG00000130812.6 10213472 0.95 1.0 16992 35385
chr19 10216899 10225456 + PPAN-P2RY11 ENSG00000243207.2 10216899 0.87 0.85 16993 31958
chr19 10216965 10225414 + PPAN ENSG00000130810.15 10216965 0.83 0.91 16994 31892
chr19 10222214 10226048 + P2RY11 ENSG00000244165.1 10222214 0.68 1.0 16995 26643
chr19 10225693 10230596 - EIF3G ENSG00000130811.6 10230596 0.61 1.0 16996 18261
Expression level of Genes
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miRNAs possibly regulated by vista28562[chr19:10148640-10148857]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results