EnhancerDB
  1. Home
  2. Enhancers
  3. vista28570[chr19:10349944-10350302]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28570[chr19:10349944-10350302]
Back to top
Tissue distribution of vista28570
Back to top
Transcription factor that possibly regulate vista28570[chr19:10349944-10350302]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 10349911 10350341 RUNX3 UCSC Txn Factor no Conserved 108383108
chr19 10349934 10350072 BHLHE40 UCSC Txn Factor no Conserved 108383114
chr19 10349967 10350360 EP300 UCSC Txn Factor no Conserved 108383118
chr19 10349943 10349958 FOXP1 JASPAR yes 70801391
chr19 10349943 10349958 FOXP1 JASPAR yes 112415922
chr19 10349944 10349959 FOXP1 JASPAR yes 70801392
chr19 10349944 10349959 FOXP1 JASPAR yes 112415923
chr19 10349945 10349960 FOXP1 JASPAR yes 70801393
chr19 10349945 10349960 FOXP1 JASPAR yes 112415924
chr19 10349945 10349966 IRF1 JASPAR yes 70801394
chr19 10349945 10349966 IRF1 JASPAR yes 112415925
chr19 10349946 10349961 FOXP1 JASPAR yes 70801395
chr19 10349946 10349961 FOXP1 JASPAR yes 112415926
chr19 10349946 10349967 IRF1 JASPAR yes 70801396
chr19 10349946 10349967 IRF1 JASPAR yes 112415927
chr19 10349947 10349962 FOXP1 JASPAR yes 70801397
chr19 10349947 10349962 FOXP1 JASPAR yes 112415928
chr19 10349947 10349968 IRF1 JASPAR yes 70801398
chr19 10349947 10349968 IRF1 JASPAR yes 112415929
chr19 10349948 10349963 FOXP1 JASPAR yes 70801399
chr19 10349948 10349963 FOXP1 JASPAR yes 112415930
chr19 10349948 10349969 IRF1 JASPAR yes 70801400
chr19 10349948 10349969 IRF1 JASPAR yes 112415931
chr19 10349949 10349964 FOXP1 JASPAR yes 70801401
chr19 10349949 10349964 FOXP1 JASPAR yes 112415932
chr19 10349949 10349970 IRF1 JASPAR yes 70801402
chr19 10349949 10349970 IRF1 JASPAR yes 112415933
chr19 10349950 10349965 FOXP1 JASPAR yes 70801403
chr19 10349950 10349965 FOXP1 JASPAR yes 112415934
chr19 10349950 10349971 IRF1 JASPAR yes 70801404
chr19 10349950 10349971 IRF1 JASPAR yes 112415935
chr19 10349951 10349966 FOXP1 JASPAR yes 70801405
chr19 10349951 10349966 FOXP1 JASPAR yes 112415936
chr19 10349952 10349967 FOXP1 JASPAR yes 70801406
chr19 10349952 10349967 FOXP1 JASPAR yes 112415937
chr19 10349953 10349968 FOXP1 JASPAR yes 70801407
chr19 10349953 10349968 FOXP1 JASPAR yes 112415938
chr19 10349960 10349974 JUN JASPAR yes 70801408
chr19 10349960 10349974 JUN JASPAR yes 112415939
chr19 10349962 10349973 BATF JASPAR yes 70801409
chr19 10349962 10349973 BATF JASPAR yes 112415940
chr19 10349963 10349974 FOSL2 JASPAR yes 70801410
chr19 10349963 10349974 JUNB JASPAR yes 70801411
chr19 10349963 10349974 FOSL2 JASPAR yes 112415941
chr19 10349963 10349974 JUNB JASPAR yes 112415942
chr19 10349964 10349975 FOS JASPAR yes 70801412
chr19 10349964 10349975 FOSL1 JASPAR yes 70801413
chr19 10349964 10349975 JUND JASPAR yes 70801414
chr19 10349964 10349975 NFE2 JASPAR yes 70801415
chr19 10349964 10349975 FOS JASPAR yes 112415943
chr19 10349964 10349975 FOSL1 JASPAR yes 112415944
chr19 10349964 10349975 JUND JASPAR yes 112415945
chr19 10349964 10349975 NFE2 JASPAR yes 112415946
chr19 10349965 10349974 JDP2 JASPAR yes 70801416
chr19 10349965 10349974 JDP2 JASPAR yes 112415947
chr19 10349965 10349979 JUN JASPAR yes 70801417
chr19 10349965 10349979 JUN JASPAR yes 112415948
chr19 10349966 10349973 JUN TRANSFAC yes 70801418
chr19 10349966 10349973 JUN TRANSFAC yes 112415949
chr19 10349980 10349992 HES5 JASPAR yes 70801419
chr19 10349980 10349992 HES7 JASPAR yes 70801420
chr19 10349980 10349992 HES5 JASPAR yes 112415950
chr19 10349980 10349992 HES7 JASPAR yes 112415951
chr19 10349981 10349991 BHLHE40 JASPAR yes 70801421
chr19 10349981 10349991 BHLHE41 JASPAR yes 70801422
chr19 10349981 10349991 HEY1 JASPAR yes 70801423
chr19 10349981 10349991 HEY2 JASPAR yes 70801424
chr19 10349981 10349991 MAX JASPAR yes 70801425
chr19 10349981 10349991 MNT JASPAR yes 70801426
chr19 10349981 10349991 TFE3 JASPAR yes 70801427
chr19 10349981 10349991 TFEB JASPAR yes 70801428
chr19 10349981 10349991 BHLHE40 JASPAR yes 112415952
chr19 10349981 10349991 BHLHE41 JASPAR yes 112415953
chr19 10349981 10349991 HEY1 JASPAR yes 112415954
chr19 10349981 10349991 HEY2 JASPAR yes 112415955
chr19 10349981 10349991 MAX JASPAR yes 112415956
chr19 10349981 10349991 MNT JASPAR yes 112415957
chr19 10349981 10349991 TFE3 JASPAR yes 112415958
chr19 10349981 10349991 TFEB JASPAR yes 112415959
chr19 10349983 10349988 MYC TRANSFAC yes 70801429
chr19 10349983 10349988 USF1 TRANSFAC yes 70801430
chr19 10349983 10349988 USF2 TRANSFAC yes 70801431
chr19 10349983 10349988 MYC TRANSFAC yes 112415960
chr19 10349983 10349988 USF1 TRANSFAC yes 112415961
chr19 10349983 10349988 USF2 TRANSFAC yes 112415962
chr19 10349983 10350001 TP53 JASPAR yes 70801432
chr19 10349983 10350001 TP53 JASPAR yes 112415963
chr19 10349985 10350000 TP53 JASPAR yes 70801433
chr19 10349985 10350000 TP53 JASPAR yes 112415964
chr19 10350042 10350053 TBX2 JASPAR yes 70801434
chr19 10350042 10350053 TBX2 JASPAR yes 112415965
chr19 10350044 10350061 RXRA JASPAR yes 70801435
chr19 10350044 10350061 RXRA JASPAR yes 112415966
chr19 10350052 10350056 NFE TRANSFAC yes 70801436
chr19 10350052 10350056 NFE TRANSFAC yes 112415967
chr19 10350085 10350104 PAX5 JASPAR yes 70801437
chr19 10350085 10350104 PAX5 JASPAR yes 112415968
chr19 10350103 10350107 H1TF2 TRANSFAC yes 70801438
chr19 10350103 10350107 NFE TRANSFAC yes 70801439
chr19 10350103 10350107 SRF TRANSFAC yes 70801440
chr19 10350103 10350107 H1TF2 TRANSFAC yes 112415969
chr19 10350103 10350107 NFE TRANSFAC yes 112415970
chr19 10350103 10350107 SRF TRANSFAC yes 112415971
chr19 10350110 10350125 FOXP1 JASPAR yes 70801441
chr19 10350110 10350125 FOXP1 JASPAR yes 112415972
chr19 10350111 10350126 FOXP1 JASPAR yes 70801442
chr19 10350111 10350126 FOXP1 JASPAR yes 112415973
chr19 10350112 10350118 TBP TRANSFAC yes 70801443
chr19 10350112 10350118 TBP TRANSFAC yes 112415974
chr19 10350112 10350127 FOXP1 JASPAR yes 70801444
chr19 10350112 10350127 FOXP1 JASPAR yes 112415975
chr19 10350113 10350128 FOXP1 JASPAR yes 70801445
chr19 10350113 10350128 FOXP1 JASPAR yes 112415976
chr19 10350113 10350134 IRF1 JASPAR yes 70801446
chr19 10350113 10350134 IRF1 JASPAR yes 112415977
chr19 10350114 10350129 FOXP1 JASPAR yes 70801447
chr19 10350114 10350129 FOXP1 JASPAR yes 112415978
chr19 10350117 10350132 PRDM1 JASPAR yes 70801448
chr19 10350117 10350132 STAT2 JASPAR yes 70801449
chr19 10350117 10350132 PRDM1 JASPAR yes 112415979
chr19 10350117 10350132 STAT2 JASPAR yes 112415980
chr19 10350128 10350138 ZNF740 JASPAR yes 70801450
chr19 10350128 10350138 ZNF740 JASPAR yes 112415981
chr19 10350128 10350140 E2F8 JASPAR yes 70801451
chr19 10350128 10350140 E2F8 JASPAR yes 112415982
chr19 10350131 10350145 PLAG1 JASPAR yes 70801452
chr19 10350131 10350145 PLAG1 JASPAR yes 112415983
chr19 10350132 10350146 PLAG1 JASPAR yes 70801453
chr19 10350132 10350146 PLAG1 JASPAR yes 112415984
chr19 10350134 10350138 LFA1 TRANSFAC yes 70801454
chr19 10350134 10350138 LFA1 TRANSFAC yes 112415985
chr19 10350147 10350162 FOXP1 JASPAR yes 70801455
chr19 10350147 10350162 FOXP1 JASPAR yes 112415986
chr19 10350148 10350163 FOXP1 JASPAR yes 70801456
chr19 10350148 10350163 FOXP1 JASPAR yes 112415987
chr19 10350182 10350197 RUNX2 JASPAR yes 70801457
chr19 10350182 10350197 RUNX2 JASPAR yes 112415988
chr19 10350185 10350196 RUNX1 JASPAR yes 70801458
chr19 10350185 10350196 RUNX1 JASPAR yes 112415989
chr19 10350186 10350196 RUNX3 JASPAR yes 70801459
chr19 10350186 10350196 RUNX3 JASPAR yes 112415990
chr19 10350187 10350196 RUNX2 JASPAR yes 70801460
chr19 10350187 10350196 RUNX2 JASPAR yes 112415991
chr19 10350198 10350208 MLX JASPAR yes 70801461
chr19 10350198 10350208 MLX JASPAR yes 112415992
chr19 10350204 10350220 SRF JASPAR yes 70801462
chr19 10350204 10350220 SRF JASPAR yes 112415993
chr19 10350216 10350227 STAT3 JASPAR yes 70801463
chr19 10350216 10350227 STAT3 JASPAR yes 112415994
chr19 10350229 10350242 ZBTB18 JASPAR yes 70801464
chr19 10350229 10350242 ZBTB18 JASPAR yes 112415995
chr19 10350236 10350248 POU2F1 JASPAR yes 70801465
chr19 10350236 10350248 POU2F1 JASPAR yes 112415996
chr19 10350236 10350250 POU1F1 JASPAR yes 70801466
chr19 10350236 10350250 POU1F1 JASPAR yes 112415997
chr19 10350237 10350249 POU3F1 JASPAR yes 70801467
chr19 10350237 10350249 POU3F2 JASPAR yes 70801468
chr19 10350237 10350249 POU3F1 JASPAR yes 112415998
chr19 10350237 10350249 POU3F2 JASPAR yes 112415999
chr19 10350237 10350250 POU2F2 JASPAR yes 70801469
chr19 10350237 10350250 POU2F2 JASPAR yes 112416000
chr19 10350238 10350247 POU3F4 JASPAR yes 70801470
chr19 10350238 10350247 POU5F1B JASPAR yes 70801471
chr19 10350238 10350247 POU3F4 JASPAR yes 112416001
chr19 10350238 10350247 POU5F1B JASPAR yes 112416002
chr19 10350243 10350257 SPI1 JASPAR yes 70801472
chr19 10350243 10350257 SPIC JASPAR yes 70801473
chr19 10350243 10350257 SPI1 JASPAR yes 112416003
chr19 10350243 10350257 SPIC JASPAR yes 112416004
chr19 10350249 10350254 ETS2 TRANSFAC yes 70801474
chr19 10350249 10350254 ETS2 TRANSFAC yes 112416005
chr19 10350277 10350296 PAX5 JASPAR yes 70801475
chr19 10350277 10350296 PAX5 JASPAR yes 112416006
chr19 10350285 10350289 NFE TRANSFAC yes 70801476
chr19 10350285 10350289 NFE TRANSFAC yes 112416007
SNP sites on vista28570[chr19:10349944-10350302]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 10350221 rs190170816 T C
EP300 RUNX3 STAT3
5435566
chr19 10350261 rs113617266 C CTTTCTTTCTTTT,CTTTCTTTTTTT,CTTTCTTTTTTTT
EP300 RUNX3
5435567
chr19 10350261 rs71162055 C CTTTCTTTTTTTT
EP300 RUNX3
5435568
Genes possibly regulated by vista28570[chr19:10349944-10350302]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 10244021 10341962 - DNMT1 ENSG00000130816.10 10341962 0.87 1.0 16997 92018
chr19 10334520 10341948 - S1PR2 ENSG00000267534.1 10341948 0.86 1.0 16998 92004
chr19 10362577 10370721 + MRPL4 ENSG00000105364.9 10362577 0.79 1.0 16999 87725
chr19 10381511 10397291 + ICAM1 ENSG00000090339.4 10381511 0.94 0.99 17000 68791
chr19 10397643 10399198 + ICAM4 ENSG00000105371.8 10397643 0.97 0.97 17001 52659
chr19 10400657 10407454 + ICAM5 ENSG00000105376.4 10400657 0.98 1.0 17002 49645
chr19 10415479 10420556 - ZGLP1 ENSG00000220201.3 10420556 0.82 0.99 17003 29746
chr19 10416103 10426685 - CTD-2369P2.10 ENSG00000167807.11 10426685 0.9 0.7 17005 23617
chr19 10416103 10426691 - FDX1L ENSG00000267673.2 10426691 0.62 0.7 17004 23611
chr19 10426147 10431354 - CTD-2369P2.12 ENSG00000267303.1 10431354 0.91 0.88 17006 18948
chr19 10426888 10444316 - RAVER1 ENSG00000161847.9 10444316 0.63 0.99 17007 5986
Expression level of Genes
Back to top
miRNAs possibly regulated by vista28570[chr19:10349944-10350302]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results