EnhancerDB

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chrom.	Start	End	TF Name	Source	Predicted site?	Tissue/Cell line	id
chr19	10457197	10457409	EGR1	UCSC Txn Factor	no	Conserved	108383152
chr19	10457208	10457473	CEBPB	UCSC Txn Factor	no	Conserved	108383157
chr19	10457239	10457603	RFX5	UCSC Txn Factor	no	Conserved	108383159
chr19	10457284	10457295	PROP1	JASPAR	yes		70801569
chr19	10457284	10457296	POU3F1	JASPAR	yes		70801570
chr19	10457284	10457296	POU3F2	JASPAR	yes		70801571
chr19	10457284	10457297	POU3F3	JASPAR	yes		70801572
chr19	10457301	10457311	SP1	JASPAR	yes		70801573
chr19	10457301	10457322	ZNF263	JASPAR	yes		70801574
chr19	10457303	10457308	SP1	TRANSFAC	yes		70801575
chr19	10457303	10457315	HINFP	JASPAR	yes		70801576
chr19	10457326	10457337	CEBPB	JASPAR	yes		70801577
chr19	10457327	10457337	CEBPB	JASPAR	yes		70801578
chr19	10457327	10457337	CEBPD	JASPAR	yes		70801579
chr19	10457327	10457337	CEBPE	JASPAR	yes		70801580
chr19	10457327	10457337	CEBPG	JASPAR	yes		70801581
chr19	10457352	10457363	NFE2L2	JASPAR	yes		70801582
chr19	10457370	10457381	CEBPA	JASPAR	yes		70801583
chr19	10457382	10457387	TFAP2A	TRANSFAC	yes		70801584
chr19	10457382	10457388	MZF1	JASPAR	yes		70801585
chr19	10457385	10457399	FOXF2	JASPAR	yes		70801586
chr19	10457386	10457401	FOXA1	JASPAR	yes		70801587
chr19	10457395	10457398	MYB	TRANSFAC	yes		70801588
chr19	10457401	10457412	NRL	JASPAR	yes		70801589
chr19	10457405	10457420	RFX5	JASPAR	yes		70801590
chr19	10457406	10457411	MYC	TRANSFAC	yes		70801591
chr19	10457410	10457422	INSM1	JASPAR	yes		70801592
chr19	10457456	10457461	ATF1	TRANSFAC	yes		70801593
chr19	10457481	10457491	MAX	JASPAR	yes		70801594
chr19	10457498	10457503	SP1	TRANSFAC	yes		70801595

chrom	Position	dbSNP ID	Reference Allele	Alternative Allele	is SNP in TFBS	id
chr19	10457319	rs560454364	T	C	CEBPB EGR1 RFX5 ZNF263	5436125
chr19	10457333	rs528194440	G	A	CEBPB CEBPD CEBPE CEBPG EGR1 RFX5	5436126
chr19	10457382	rs78899861	A	G	CEBPB EGR1 MZF1 RFX5 TFAP2A	5436127
chr19	10457472	rs28378712	T	G	CEBPB RFX5	5436128

Blank TSI value indicates lack of sufficient expression for calculation
Chrom	Start	End	Strand	Gene Name	Ensembl ID	TSS	TSI of Normal tissues	TSI of Cancer tissues	Distance between enhancer and TSS	id
chr19	10362577	10370721	+	MRPL4	ENSG00000105364.9	10362577	0.79	1.0	16999	5296
chr19	10381511	10397291	+	ICAM1	ENSG00000090339.4	10381511	0.94	0.99	17000	24230
chr19	10397643	10399198	+	ICAM4	ENSG00000105371.8	10397643	0.97	0.97	17001	40362
chr19	10400657	10407454	+	ICAM5	ENSG00000105376.4	10400657	0.98	1.0	17002	43376
chr19	10415479	10420556	-	ZGLP1	ENSG00000220201.3	10420556	0.82	0.99	17003	63275
chr19	10416103	10426685	-	CTD-2369P2.10	ENSG00000167807.11	10426685	0.9	0.7	17005	69404
chr19	10416103	10426691	-	FDX1L	ENSG00000267673.2	10426691	0.62	0.7	17004	69410
chr19	10426147	10431354	-	CTD-2369P2.12	ENSG00000267303.1	10431354	0.91	0.88	17006	74073
chr19	10426888	10444316	-	RAVER1	ENSG00000161847.9	10444316	0.63	0.99	17007	87035
chr19	10444452	10450499	-	ICAM3	ENSG00000076662.5	10450499	0.86	0.99	17008	93218
chr19	10461209	10491352	-	TYK2	ENSG00000105397.9	10491352	0.77	1.0	17009	66190
chr19	10501810	10530797	-	CDC37	ENSG00000105401.2	10530797	0.65	1.0	17010	26745
chr19	10527449	10580305	+	PDE4A	ENSG00000065989.11	10527449	0.76	1.0	17011	30093

Blank TSI value indicates lack of sufficient expression for calculation
Chrom	Start	End	Strand	miRNA Name	miRBase ID	TSS	Score	TSI of Normal tissues	TSI of Cancer tissues	id	More

No results