EnhancerDB
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  3. vista28585[chr19:10538657-10539326]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28585[chr19:10538657-10539326]
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Tissue distribution of vista28585
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Transcription factor that possibly regulate vista28585[chr19:10538657-10539326]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 10538688 10539130 MAX UCSC Txn Factor no Conserved 108383486
chr19 10538771 10539087 MYC UCSC Txn Factor no Conserved 108383492
chr19 10538797 10539169 RUNX3 UCSC Txn Factor no Conserved 108383496
chr19 10539020 10539156 ZZZ3 UCSC Txn Factor no Conserved 108383513
chr19 10538663 10538671 MEIS2 JASPAR yes 70802229
chr19 10538663 10538671 MEIS3 JASPAR yes 70802230
chr19 10538663 10538671 MEIS2 JASPAR yes 112421051
chr19 10538663 10538671 MEIS3 JASPAR yes 112421052
chr19 10538664 10538668 NFE TRANSFAC yes 70802231
chr19 10538664 10538668 NFE TRANSFAC yes 112421053
chr19 10538664 10538671 MEIS1 JASPAR yes 70802232
chr19 10538664 10538671 MEIS1 JASPAR yes 112421054
chr19 10538667 10538682 FOXP1 JASPAR yes 70802233
chr19 10538667 10538682 FOXP1 JASPAR yes 112421055
chr19 10538668 10538683 FOXP1 JASPAR yes 70802234
chr19 10538668 10538683 FOXP1 JASPAR yes 112421056
chr19 10538668 10538689 IRF1 JASPAR yes 70802235
chr19 10538668 10538689 IRF1 JASPAR yes 112421057
chr19 10538669 10538684 FOXP1 JASPAR yes 70802236
chr19 10538669 10538684 FOXP1 JASPAR yes 112421058
chr19 10538669 10538690 IRF1 JASPAR yes 70802237
chr19 10538669 10538690 IRF1 JASPAR yes 112421059
chr19 10538670 10538685 FOXP1 JASPAR yes 70802238
chr19 10538670 10538685 FOXP1 JASPAR yes 112421060
chr19 10538670 10538691 IRF1 JASPAR yes 70802239
chr19 10538670 10538691 IRF1 JASPAR yes 112421061
chr19 10538671 10538686 FOXP1 JASPAR yes 70802240
chr19 10538671 10538686 FOXP1 JASPAR yes 112421062
chr19 10538671 10538692 IRF1 JASPAR yes 70802241
chr19 10538671 10538692 IRF1 JASPAR yes 112421063
chr19 10538672 10538687 FOXP1 JASPAR yes 70802242
chr19 10538672 10538687 FOXP1 JASPAR yes 112421064
chr19 10538672 10538693 IRF1 JASPAR yes 70802243
chr19 10538672 10538693 IRF1 JASPAR yes 112421065
chr19 10538673 10538688 FOXP1 JASPAR yes 70802244
chr19 10538673 10538688 FOXP1 JASPAR yes 112421066
chr19 10538673 10538694 IRF1 JASPAR yes 70802245
chr19 10538673 10538694 IRF1 JASPAR yes 112421067
chr19 10538674 10538689 FOXP1 JASPAR yes 70802246
chr19 10538674 10538689 FOXP1 JASPAR yes 112421068
chr19 10538676 10538691 FOXP1 JASPAR yes 70802247
chr19 10538676 10538691 FOXP1 JASPAR yes 112421069
chr19 10538692 10538702 FIGLA JASPAR yes 70802248
chr19 10538692 10538702 FIGLA JASPAR yes 112421070
chr19 10538694 10538699 USF2 TRANSFAC yes 70802249
chr19 10538694 10538699 USF2 TRANSFAC yes 112421071
chr19 10538695 10538715 RREB1 JASPAR yes 70802250
chr19 10538695 10538715 RREB1 JASPAR yes 112421072
chr19 10538697 10538717 RREB1 JASPAR yes 70802251
chr19 10538697 10538717 RREB1 JASPAR yes 112421073
chr19 10538699 10538704 SP1 TRANSFAC yes 70802252
chr19 10538699 10538704 SP1 TRANSFAC yes 112421074
chr19 10538700 10538714 PLAG1 JASPAR yes 70802253
chr19 10538700 10538714 PLAG1 JASPAR yes 112421075
chr19 10538702 10538718 ZNF143 JASPAR yes 70802254
chr19 10538702 10538718 ZNF143 JASPAR yes 112421076
chr19 10538710 10538715 SP1 TRANSFAC yes 70802255
chr19 10538710 10538715 SP1 TRANSFAC yes 112421077
chr19 10538718 10538724 SOX10 JASPAR yes 70802256
chr19 10538718 10538724 SOX10 JASPAR yes 112421078
chr19 10538724 10538734 GSC2 JASPAR yes 70802257
chr19 10538724 10538734 GSC2 JASPAR yes 112421079
chr19 10538725 10538733 OTX1 JASPAR yes 70802258
chr19 10538725 10538733 OTX2 JASPAR yes 70802259
chr19 10538725 10538733 OTX1 JASPAR yes 112421080
chr19 10538725 10538733 OTX2 JASPAR yes 112421081
chr19 10538729 10538744 JUND JASPAR yes 70802260
chr19 10538729 10538744 JUND JASPAR yes 112421082
chr19 10538732 10538747 JUND JASPAR yes 70802261
chr19 10538732 10538747 JUND JASPAR yes 112421083
chr19 10538733 10538746 JUN JASPAR yes 70802262
chr19 10538733 10538746 JUN JASPAR yes 112421084
chr19 10538749 10538761 GLI2 JASPAR yes 70802263
chr19 10538749 10538761 GLI2 JASPAR yes 112421085
chr19 10538754 10538765 FOSL2 JASPAR yes 70802264
chr19 10538754 10538765 FOSL2 JASPAR yes 112421086
chr19 10538770 10538791 LUN1 TRANSFAC yes 70802265
chr19 10538770 10538791 LUN1 TRANSFAC yes 112421087
chr19 10538787 10538801 PLAG1 JASPAR yes 70802266
chr19 10538787 10538801 PLAG1 JASPAR yes 112421088
chr19 10538794 10538799 SP1 TRANSFAC yes 70802267
chr19 10538794 10538799 SP1 TRANSFAC yes 112421089
chr19 10538795 10538800 SP1 TRANSFAC yes 70802268
chr19 10538795 10538800 SP1 TRANSFAC yes 112421090
chr19 10538795 10538804 THAP1 JASPAR yes 70802269
chr19 10538795 10538804 THAP1 JASPAR yes 112421091
chr19 10538798 10538802 LFA1 TRANSFAC yes 70802270
chr19 10538798 10538802 LFA1 TRANSFAC yes 112421092
chr19 10538836 10538840 LFA1 TRANSFAC yes 70802271
chr19 10538836 10538840 LFA1 TRANSFAC yes 112421093
chr19 10538845 10538856 NFKB1 JASPAR yes 70802272
chr19 10538845 10538856 NFKB1 JASPAR yes 112421094
chr19 10538846 10538856 NFKB1 JASPAR yes 70802273
chr19 10538846 10538856 RELA JASPAR yes 70802274
chr19 10538846 10538856 REL JASPAR yes 70802275
chr19 10538846 10538856 NFKB1 JASPAR yes 112421095
chr19 10538846 10538856 RELA JASPAR yes 112421096
chr19 10538846 10538856 REL JASPAR yes 112421097
chr19 10538875 10538894 PAX5 JASPAR yes 70802276
chr19 10538875 10538894 PAX5 JASPAR yes 112421098
chr19 10538913 10538921 FOXC1 JASPAR yes 70802277
chr19 10538913 10538921 FOXC1 JASPAR yes 112421099
chr19 10538935 10538949 RXRB JASPAR yes 70802278
chr19 10538935 10538949 RXRB JASPAR yes 112421100
chr19 10538956 10538967 ELK4 JASPAR yes 70802279
chr19 10538956 10538967 FLI1 JASPAR yes 70802280
chr19 10538956 10538967 ELK4 JASPAR yes 112421101
chr19 10538956 10538967 FLI1 JASPAR yes 112421102
chr19 10538957 10538965 EHF JASPAR yes 70802281
chr19 10538957 10538965 FEV JASPAR yes 70802282
chr19 10538957 10538965 EHF JASPAR yes 112421103
chr19 10538957 10538965 FEV JASPAR yes 112421104
chr19 10538958 10538965 SPI1 JASPAR yes 70802283
chr19 10538958 10538965 SPI1 JASPAR yes 112421105
chr19 10539026 10539030 NFE TRANSFAC yes 70802284
chr19 10539026 10539030 NFE TRANSFAC yes 112421106
chr19 10539033 10539054 ZNF263 JASPAR yes 70802285
chr19 10539033 10539054 ZNF263 JASPAR yes 112421107
chr19 10539034 10539049 PRDM1 JASPAR yes 70802286
chr19 10539034 10539049 PRDM1 JASPAR yes 112421108
chr19 10539035 10539056 ZNF263 JASPAR yes 70802287
chr19 10539035 10539056 ZNF263 JASPAR yes 112421109
chr19 10539036 10539051 PRDM1 JASPAR yes 70802288
chr19 10539036 10539051 PRDM1 JASPAR yes 112421110
chr19 10539037 10539058 ZNF263 JASPAR yes 70802289
chr19 10539037 10539058 ZNF263 JASPAR yes 112421111
chr19 10539038 10539053 PRDM1 JASPAR yes 70802290
chr19 10539038 10539053 PRDM1 JASPAR yes 112421112
chr19 10539039 10539060 ZNF263 JASPAR yes 70802291
chr19 10539039 10539060 ZNF263 JASPAR yes 112421113
chr19 10539040 10539055 PRDM1 JASPAR yes 70802292
chr19 10539040 10539055 PRDM1 JASPAR yes 112421114
chr19 10539041 10539062 ZNF263 JASPAR yes 70802293
chr19 10539041 10539062 ZNF263 JASPAR yes 112421115
chr19 10539042 10539057 PRDM1 JASPAR yes 70802294
chr19 10539042 10539057 PRDM1 JASPAR yes 112421116
chr19 10539043 10539064 ZNF263 JASPAR yes 70802295
chr19 10539043 10539064 ZNF263 JASPAR yes 112421117
chr19 10539044 10539059 PRDM1 JASPAR yes 70802296
chr19 10539044 10539059 PRDM1 JASPAR yes 112421118
chr19 10539045 10539066 ZNF263 JASPAR yes 70802297
chr19 10539045 10539066 ZNF263 JASPAR yes 112421119
chr19 10539046 10539061 PRDM1 JASPAR yes 70802298
chr19 10539046 10539061 PRDM1 JASPAR yes 112421120
chr19 10539047 10539068 ZNF263 JASPAR yes 70802299
chr19 10539047 10539068 ZNF263 JASPAR yes 112421121
chr19 10539048 10539063 PRDM1 JASPAR yes 70802300
chr19 10539048 10539063 PRDM1 JASPAR yes 112421122
chr19 10539050 10539065 PRDM1 JASPAR yes 70802301
chr19 10539050 10539065 PRDM1 JASPAR yes 112421123
chr19 10539052 10539067 PRDM1 JASPAR yes 70802302
chr19 10539052 10539067 PRDM1 JASPAR yes 112421124
chr19 10539054 10539069 PRDM1 JASPAR yes 70802303
chr19 10539054 10539069 PRDM1 JASPAR yes 112421125
chr19 10539073 10539094 ZNF263 JASPAR yes 70802304
chr19 10539073 10539094 ZNF263 JASPAR yes 112421126
chr19 10539074 10539089 PRDM1 JASPAR yes 70802305
chr19 10539074 10539089 PRDM1 JASPAR yes 112421127
chr19 10539076 10539091 PRDM1 JASPAR yes 70802306
chr19 10539076 10539091 PRDM1 JASPAR yes 112421128
chr19 10539078 10539093 PRDM1 JASPAR yes 70802307
chr19 10539078 10539093 PRDM1 JASPAR yes 112421129
chr19 10539080 10539095 PRDM1 JASPAR yes 70802308
chr19 10539080 10539095 PRDM1 JASPAR yes 112421130
chr19 10539118 10539128 GABPA JASPAR yes 70802309
chr19 10539118 10539128 GABPA JASPAR yes 112421131
chr19 10539118 10539129 FLI1 JASPAR yes 70802310
chr19 10539118 10539129 FLI1 JASPAR yes 112421132
chr19 10539145 10539149 NFE TRANSFAC yes 70802311
chr19 10539145 10539149 NFE TRANSFAC yes 112421133
chr19 10539162 10539176 POU1F1 JASPAR yes 70802312
chr19 10539162 10539176 POU1F1 JASPAR yes 112421134
chr19 10539164 10539168 YY1 TRANSFAC yes 70802313
chr19 10539164 10539168 YY1 TRANSFAC yes 112421135
chr19 10539200 10539213 POU2F2 JASPAR yes 70802314
chr19 10539200 10539213 POU2F2 JASPAR yes 112421136
chr19 10539200 10539214 POU1F1 JASPAR yes 70802315
chr19 10539200 10539214 POU1F1 JASPAR yes 112421137
chr19 10539201 10539210 POU2F1 TRANSFAC yes 70802316
chr19 10539201 10539210 POU2F1 TRANSFAC yes 112421138
chr19 10539201 10539213 POU3F1 JASPAR yes 70802317
chr19 10539201 10539213 POU3F2 JASPAR yes 70802318
chr19 10539201 10539213 POU3F1 JASPAR yes 112421139
chr19 10539201 10539213 POU3F2 JASPAR yes 112421140
chr19 10539201 10539214 POU3F3 JASPAR yes 70802319
chr19 10539201 10539214 POU3F3 JASPAR yes 112421141
chr19 10539202 10539214 POU2F1 JASPAR yes 70802320
chr19 10539202 10539214 POU2F1 JASPAR yes 112421142
chr19 10539203 10539210 POU2F1 TRANSFAC yes 70802321
chr19 10539203 10539210 POU2F2C TRANSFAC yes 70802322
chr19 10539203 10539210 POU2F2 TRANSFAC yes 70802323
chr19 10539203 10539210 POU2F1 TRANSFAC yes 112421143
chr19 10539203 10539210 POU2F2C TRANSFAC yes 112421144
chr19 10539203 10539210 POU2F2 TRANSFAC yes 112421145
chr19 10539203 10539211 POU2F1 TRANSFAC yes 70802324
chr19 10539203 10539211 POU2F1 TRANSFAC yes 112421146
chr19 10539203 10539212 POU3F4 JASPAR yes 70802325
chr19 10539203 10539212 POU5F1B JASPAR yes 70802326
chr19 10539203 10539212 POU3F4 JASPAR yes 112421147
chr19 10539203 10539212 POU5F1B JASPAR yes 112421148
chr19 10539213 10539217 TEAD2 TRANSFAC yes 70802327
chr19 10539213 10539217 TEAD2 TRANSFAC yes 112421149
chr19 10539222 10539233 FOXB1 JASPAR yes 70802328
chr19 10539222 10539233 FOXC1 JASPAR yes 70802329
chr19 10539222 10539233 FOXB1 JASPAR yes 112421150
chr19 10539222 10539233 FOXC1 JASPAR yes 112421151
chr19 10539222 10539234 FOXC2 JASPAR yes 70802330
chr19 10539222 10539234 FOXC2 JASPAR yes 112421152
chr19 10539230 10539234 YY1 TRANSFAC yes 70802331
chr19 10539230 10539234 YY1 TRANSFAC yes 112421153
chr19 10539235 10539247 HNF1B JASPAR yes 70802332
chr19 10539235 10539247 HNF1B JASPAR yes 112421154
chr19 10539250 10539253 MYB TRANSFAC yes 70802333
chr19 10539250 10539253 MYB TRANSFAC yes 112421155
chr19 10539317 10539327 SREBF1 JASPAR yes 70802334
chr19 10539317 10539327 SREBF2 JASPAR yes 70802335
chr19 10539317 10539327 SREBF1 JASPAR yes 112421156
chr19 10539317 10539327 SREBF2 JASPAR yes 112421157
SNP sites on vista28585[chr19:10538657-10539326]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 10538657 rs535214356 G A no 5436554
chr19 10538719 rs8112675 C T
MAX SOX10
5436555
chr19 10538748 rs535916961 C T
MAX
5436556
chr19 10538773 rs145613226 A G
LUN1 MAX MYC
5436557
chr19 10538799 rs1387025 G A,T
LFA1 MAX MYC PLAG1 RUNX3 SP1 THAP1
5436558
chr19 10538989 rs558236637 G A
MAX MYC RUNX3
5436559
chr19 10539032 rs548679214 T G
MAX MYC RUNX3 ZZZ3
5436560
chr19 10539033 rs142155407 CGAGAGA C
MAX MYC RUNX3 ZNF263 ZZZ3
5436561
chr19 10539160 rs563707066 A G
RUNX3
5436562
Genes possibly regulated by vista28585[chr19:10538657-10539326]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 10426888 10444316 - RAVER1 ENSG00000161847.9 10444316 0.63 0.99 17007 5659
chr19 10444452 10450499 - ICAM3 ENSG00000076662.5 10450499 0.86 0.99 17008 11842
chr19 10461209 10491352 - TYK2 ENSG00000105397.9 10491352 0.77 1.0 17009 52695
chr19 10501810 10530797 - CDC37 ENSG00000105401.2 10530797 0.65 1.0 17010 92140
chr19 10527449 10580305 + PDE4A ENSG00000065989.11 10527449 0.76 1.0 17011 88792
chr19 10596796 10614417 - KEAP1 ENSG00000079999.9 10614417 0.53 1.0 17012 24909
chr19 10623623 10628607 - S1PR5 ENSG00000180739.12 10628607 0.9 1.0 17013 10719
Expression level of Genes
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miRNAs possibly regulated by vista28585[chr19:10538657-10539326]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results