EnhancerDB
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  3. vista28614[chr19:11044199-11044446]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28614[chr19:11044199-11044446]
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Tissue distribution of vista28614
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Transcription factor that possibly regulate vista28614[chr19:11044199-11044446]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 11044208 11044212 NFE TRANSFAC yes 70803594
chr19 11044208 11044212 NFE TRANSFAC yes 112445775
chr19 11044208 11044213 GATA1 TRANSFAC yes 70803595
chr19 11044208 11044213 GATA1 TRANSFAC yes 112445776
chr19 11044208 11044214 GATA3 JASPAR yes 70803596
chr19 11044208 11044214 GATA3 JASPAR yes 112445777
chr19 11044212 11044218 LEF1 TRANSFAC yes 70803597
chr19 11044212 11044218 SOX10 JASPAR yes 70803598
chr19 11044212 11044218 LEF1 TRANSFAC yes 112445778
chr19 11044212 11044218 SOX10 JASPAR yes 112445779
chr19 11044255 11044265 NFIA JASPAR yes 70803599
chr19 11044255 11044265 NFIA JASPAR yes 112445780
chr19 11044257 11044263 NFIC JASPAR yes 70803600
chr19 11044257 11044263 NFIC JASPAR yes 112445781
chr19 11044257 11044272 HNF4A JASPAR yes 70803601
chr19 11044257 11044272 HNF4A JASPAR yes 112445782
chr19 11044258 11044272 RXRB JASPAR yes 70803602
chr19 11044258 11044272 RXRG JASPAR yes 70803603
chr19 11044258 11044272 RXRB JASPAR yes 112445783
chr19 11044258 11044272 RXRG JASPAR yes 112445784
chr19 11044258 11044273 HNF4G JASPAR yes 70803604
chr19 11044258 11044273 HNF4G JASPAR yes 112445785
chr19 11044261 11044265 YY1 TRANSFAC yes 70803605
chr19 11044261 11044265 YY1 TRANSFAC yes 112445786
chr19 11044261 11044274 NR2F1 JASPAR yes 70803606
chr19 11044261 11044274 NR2F1 JASPAR yes 112445787
chr19 11044264 11044279 HNF4A JASPAR yes 70803607
chr19 11044264 11044279 HNF4A JASPAR yes 112445788
chr19 11044265 11044279 NR2F1 JASPAR yes 70803608
chr19 11044265 11044279 RXRB JASPAR yes 70803609
chr19 11044265 11044279 RXRG JASPAR yes 70803610
chr19 11044265 11044279 NR2F1 JASPAR yes 112445789
chr19 11044265 11044279 RXRB JASPAR yes 112445790
chr19 11044265 11044279 RXRG JASPAR yes 112445791
chr19 11044265 11044280 HNF4G JASPAR yes 70803611
chr19 11044265 11044280 HNF4G JASPAR yes 112445792
chr19 11044271 11044287 POU4F2 JASPAR yes 70803612
chr19 11044271 11044287 POU4F3 JASPAR yes 70803613
chr19 11044271 11044287 POU4F2 JASPAR yes 112445793
chr19 11044271 11044287 POU4F3 JASPAR yes 112445794
chr19 11044290 11044305 SCRT1 JASPAR yes 70803614
chr19 11044290 11044305 SCRT1 JASPAR yes 112445795
chr19 11044294 11044303 SNAI2 JASPAR yes 70803615
chr19 11044294 11044303 SNAI2 JASPAR yes 112445796
chr19 11044294 11044304 FIGLA JASPAR yes 70803616
chr19 11044294 11044304 ID4 JASPAR yes 70803617
chr19 11044294 11044304 MSC JASPAR yes 70803618
chr19 11044294 11044304 MYF6 JASPAR yes 70803619
chr19 11044294 11044304 TCF3 JASPAR yes 70803620
chr19 11044294 11044304 TCF4 JASPAR yes 70803621
chr19 11044294 11044304 TFAP4 JASPAR yes 70803622
chr19 11044294 11044304 FIGLA JASPAR yes 112445797
chr19 11044294 11044304 ID4 JASPAR yes 112445798
chr19 11044294 11044304 MSC JASPAR yes 112445799
chr19 11044294 11044304 MYF6 JASPAR yes 112445800
chr19 11044294 11044304 TCF3 JASPAR yes 112445801
chr19 11044294 11044304 TCF4 JASPAR yes 112445802
chr19 11044294 11044304 TFAP4 JASPAR yes 112445803
chr19 11044294 11044306 TAL1 JASPAR yes 70803623
chr19 11044294 11044306 TAL1 JASPAR yes 112445804
chr19 11044306 11044324 MAFF JASPAR yes 70803624
chr19 11044306 11044324 MAFF JASPAR yes 112445805
chr19 11044307 11044322 MAFK JASPAR yes 70803625
chr19 11044307 11044322 MAFK JASPAR yes 112445806
chr19 11044311 11044322 NRL JASPAR yes 70803626
chr19 11044311 11044322 NRL JASPAR yes 112445807
chr19 11044330 11044337 SPIB JASPAR yes 70803627
chr19 11044330 11044337 SPIB JASPAR yes 112445808
chr19 11044356 11044366 NFAT4 TRANSFAC yes 70803628
chr19 11044356 11044366 NFAT4 TRANSFAC yes 112445809
chr19 11044357 11044361 YY1 TRANSFAC yes 70803629
chr19 11044357 11044361 YY1 TRANSFAC yes 112445810
chr19 11044359 11044369 NFATC3 JASPAR yes 70803630
chr19 11044359 11044369 NFATC3 JASPAR yes 112445811
chr19 11044360 11044367 NFATC2 JASPAR yes 70803631
chr19 11044360 11044367 NFATC2 JASPAR yes 112445812
chr19 11044396 11044399 MYB TRANSFAC yes 70803632
chr19 11044396 11044399 MYB TRANSFAC yes 112445813
chr19 11044414 11044423 PITX3 JASPAR yes 70803633
chr19 11044414 11044423 PITX3 JASPAR yes 112445814
chr19 11044414 11044424 GSC2 JASPAR yes 70803634
chr19 11044414 11044424 GSC JASPAR yes 70803635
chr19 11044414 11044424 GSC2 JASPAR yes 112445815
chr19 11044414 11044424 GSC JASPAR yes 112445816
chr19 11044415 11044423 OTX1 JASPAR yes 70803636
chr19 11044415 11044423 OTX2 JASPAR yes 70803637
chr19 11044415 11044423 OTX1 JASPAR yes 112445817
chr19 11044415 11044423 OTX2 JASPAR yes 112445818
chr19 11044425 11044440 FOXA1 JASPAR yes 70803638
chr19 11044425 11044440 FOXA1 JASPAR yes 112445819
chr19 11044430 11044445 HNF4A JASPAR yes 70803639
chr19 11044430 11044445 HNF4A JASPAR yes 112445820
chr19 11044431 11044445 NR2F1 JASPAR yes 70803640
chr19 11044431 11044445 RXRG JASPAR yes 70803641
chr19 11044431 11044445 NR2F1 JASPAR yes 112445821
chr19 11044431 11044445 RXRG JASPAR yes 112445822
chr19 11044431 11044446 HNF4G JASPAR yes 70803642
chr19 11044431 11044446 LEF1 JASPAR yes 70803643
chr19 11044431 11044446 HNF4G JASPAR yes 112445823
chr19 11044431 11044446 LEF1 JASPAR yes 112445824
chr19 11044432 11044446 TCF7L2 JASPAR yes 70803644
chr19 11044432 11044446 TCF7L2 JASPAR yes 112445825
chr19 11044435 11044441 LEF1 TRANSFAC yes 70803645
chr19 11044435 11044441 TCF4 TRANSFAC yes 70803646
chr19 11044435 11044441 LEF1 TRANSFAC yes 112445826
chr19 11044435 11044441 TCF4 TRANSFAC yes 112445827
SNP sites on vista28614[chr19:11044199-11044446]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 11044339 rs74216671 A G no 5439877
chr19 11044365 rs35887384 C T
NFAT4 NFATC2 NFATC3
5439878
Genes possibly regulated by vista28614[chr19:11044199-11044446]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 10943114 10946994 - TMED1 ENSG00000099203.2 10946994 0.67 1.0 17023 2795
chr19 10947251 10980466 + C19orf38 ENSG00000214212.4 10947251 0.95 0.99 17024 3052
chr19 10982189 11033453 + CARM1 ENSG00000142453.7 10982189 0.64 1.0 17025 37990
chr19 11033444 11039357 - YIPF2 ENSG00000130733.6 11039357 0.61 1.0 17026 95158
chr19 11039409 11044211 + C19orf52 ENSG00000142444.6 11039409 0.6 0.99 17027 95210
chr19 11071598 11176071 + SMARCA4 ENSG00000127616.13 11071598 0.8 1.0 17028 72848
Expression level of Genes
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miRNAs possibly regulated by vista28614[chr19:11044199-11044446]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results