EnhancerDB
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  3. vista28615[chr19:11202212-11202837]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28615[chr19:11202212-11202837]
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Tissue distribution of vista28615
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Transcription factor that possibly regulate vista28615[chr19:11202212-11202837]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 11199654 11203833 POLR2A UCSC Txn Factor no Conserved 108384248
chr19 11199654 11203833 POLR2A UCSC Txn Factor no Conserved 108384249
chr19 11202408 11202864 JUND UCSC Txn Factor no Conserved 108384280
chr19 11202435 11202845 FOSL2 UCSC Txn Factor no Conserved 108384287
chr19 11202486 11202770 FOS UCSC Txn Factor no Conserved 108384302
chr19 11202213 11202224 FOXA1 JASPAR yes 70803647
chr19 11202213 11202224 FOXA1 JASPAR yes 112455226
chr19 11202260 11202268 RHOXF1 JASPAR yes 70803648
chr19 11202260 11202268 RHOXF1 JASPAR yes 112455227
chr19 11202260 11202269 PITX3 JASPAR yes 70803649
chr19 11202260 11202269 PITX3 JASPAR yes 112455228
chr19 11202271 11202276 GATA1 TRANSFAC yes 70803650
chr19 11202271 11202276 GATA1 TRANSFAC yes 112455229
chr19 11202276 11202291 NFYB JASPAR yes 70803651
chr19 11202276 11202291 NFYB JASPAR yes 112455230
chr19 11202279 11202297 NFYA JASPAR yes 70803652
chr19 11202279 11202297 NFYA JASPAR yes 112455231
chr19 11202280 11202292 PBX1 JASPAR yes 70803653
chr19 11202280 11202292 PBX1 JASPAR yes 112455232
chr19 11202283 11202287 H1TF2 TRANSFAC yes 70803654
chr19 11202283 11202287 NFE TRANSFAC yes 70803655
chr19 11202283 11202287 SRF TRANSFAC yes 70803656
chr19 11202283 11202287 H1TF2 TRANSFAC yes 112455233
chr19 11202283 11202287 NFE TRANSFAC yes 112455234
chr19 11202283 11202287 SRF TRANSFAC yes 112455235
chr19 11202295 11202300 ETS2 TRANSFAC yes 70803657
chr19 11202295 11202300 ETS2 TRANSFAC yes 112455236
chr19 11202314 11202319 ETS2 TRANSFAC yes 70803658
chr19 11202314 11202319 ETS2 TRANSFAC yes 112455237
chr19 11202314 11202322 FEV JASPAR yes 70803659
chr19 11202314 11202322 FEV JASPAR yes 112455238
chr19 11202315 11202322 SPI1 JASPAR yes 70803660
chr19 11202315 11202322 SPI1 JASPAR yes 112455239
chr19 11202330 11202348 SRF JASPAR yes 70803661
chr19 11202330 11202348 SRF JASPAR yes 112455240
chr19 11202336 11202347 FOXA1 JASPAR yes 70803662
chr19 11202336 11202347 FOXA1 JASPAR yes 112455241
chr19 11202348 11202366 IRF2 JASPAR yes 70803663
chr19 11202348 11202366 IRF2 JASPAR yes 112455242
chr19 11202349 11202370 IRF1 JASPAR yes 70803664
chr19 11202349 11202370 IRF1 JASPAR yes 112455243
chr19 11202351 11202366 PRDM1 JASPAR yes 70803665
chr19 11202351 11202366 STAT2 JASPAR yes 70803666
chr19 11202351 11202366 PRDM1 JASPAR yes 112455244
chr19 11202351 11202366 STAT2 JASPAR yes 112455245
chr19 11202352 11202366 STAT1 JASPAR yes 70803667
chr19 11202352 11202366 STAT1 JASPAR yes 112455246
chr19 11202369 11202375 YY1 JASPAR yes 70803668
chr19 11202369 11202375 YY1 JASPAR yes 112455247
chr19 11202386 11202397 FOXA1 JASPAR yes 70803669
chr19 11202386 11202397 FOXA1 JASPAR yes 112455248
chr19 11202389 11202396 SPIB JASPAR yes 70803670
chr19 11202389 11202396 SPIB JASPAR yes 112455249
chr19 11202391 11202410 RFX2 JASPAR yes 70803671
chr19 11202391 11202410 RFX2 JASPAR yes 112455250
chr19 11202393 11202408 RFX5 JASPAR yes 70803672
chr19 11202393 11202408 RFX5 JASPAR yes 112455251
chr19 11202395 11202411 RFX2 JASPAR yes 70803673
chr19 11202395 11202411 RFX3 JASPAR yes 70803674
chr19 11202395 11202411 RFX4 JASPAR yes 70803675
chr19 11202395 11202411 RFX5 JASPAR yes 70803676
chr19 11202395 11202411 RFX2 JASPAR yes 112455252
chr19 11202395 11202411 RFX3 JASPAR yes 112455253
chr19 11202395 11202411 RFX4 JASPAR yes 112455254
chr19 11202395 11202411 RFX5 JASPAR yes 112455255
chr19 11202396 11202415 RFX2 JASPAR yes 70803677
chr19 11202396 11202415 RFX2 JASPAR yes 112455256
chr19 11202421 11202429 FOXO3 JASPAR yes 70803678
chr19 11202421 11202429 FOXO3 JASPAR yes 112455257
chr19 11202455 11202470 HSF1 JASPAR yes 70803679
chr19 11202455 11202470 HSF1 JASPAR yes 112455258
chr19 11202456 11202469 HSF1 JASPAR yes 70803680
chr19 11202456 11202469 HSF2 JASPAR yes 70803681
chr19 11202456 11202469 HSF4 JASPAR yes 70803682
chr19 11202456 11202469 HSF1 JASPAR yes 112455259
chr19 11202456 11202469 HSF2 JASPAR yes 112455260
chr19 11202456 11202469 HSF4 JASPAR yes 112455261
chr19 11202507 11202512 GATA2 JASPAR yes 70803683
chr19 11202507 11202512 GATA2 JASPAR yes 112455262
chr19 11202529 11202540 FLI1 JASPAR yes 70803684
chr19 11202529 11202540 FLI1 JASPAR yes 112455263
chr19 11202530 11202534 YY1 TRANSFAC yes 70803685
chr19 11202530 11202534 YY1 TRANSFAC yes 112455264
chr19 11202531 11202539 FEV JASPAR yes 70803686
chr19 11202531 11202539 FEV JASPAR yes 112455265
chr19 11202533 11202538 ETS2 TRANSFAC yes 70803687
chr19 11202533 11202538 ETS2 TRANSFAC yes 112455266
chr19 11202539 11202553 SPIC JASPAR yes 70803688
chr19 11202539 11202553 SPIC JASPAR yes 112455267
chr19 11202540 11202546 SOX10 JASPAR yes 70803689
chr19 11202540 11202546 SOX10 JASPAR yes 112455268
chr19 11202545 11202550 ETS2 TRANSFAC yes 70803690
chr19 11202545 11202550 ETS2 TRANSFAC yes 112455269
chr19 11202563 11202572 RUNX2 JASPAR yes 70803691
chr19 11202563 11202572 RUNX2 JASPAR yes 112455270
chr19 11202619 11202630 TBX2 JASPAR yes 70803692
chr19 11202619 11202630 TBX2 JASPAR yes 112455271
chr19 11202623 11202637 JUN JASPAR yes 70803693
chr19 11202623 11202637 JUN JASPAR yes 112455272
chr19 11202625 11202636 BATF JASPAR yes 70803694
chr19 11202625 11202636 BATF JASPAR yes 112455273
chr19 11202626 11202637 FOSL2 JASPAR yes 70803695
chr19 11202626 11202637 JUNB JASPAR yes 70803696
chr19 11202626 11202637 FOSL2 JASPAR yes 112455274
chr19 11202626 11202637 JUNB JASPAR yes 112455275
chr19 11202627 11202638 FOS JASPAR yes 70803697
chr19 11202627 11202638 FOSL1 JASPAR yes 70803698
chr19 11202627 11202638 JUND JASPAR yes 70803699
chr19 11202627 11202638 NFE2 JASPAR yes 70803700
chr19 11202627 11202638 FOS JASPAR yes 112455276
chr19 11202627 11202638 FOSL1 JASPAR yes 112455277
chr19 11202627 11202638 JUND JASPAR yes 112455278
chr19 11202627 11202638 NFE2 JASPAR yes 112455279
chr19 11202628 11202637 JDP2 JASPAR yes 70803701
chr19 11202628 11202637 JDP2 JASPAR yes 112455280
chr19 11202628 11202639 FOSL2 JASPAR yes 70803702
chr19 11202628 11202639 JUNB JASPAR yes 70803703
chr19 11202628 11202639 FOSL2 JASPAR yes 112455281
chr19 11202628 11202639 JUNB JASPAR yes 112455282
chr19 11202628 11202642 JUN JASPAR yes 70803704
chr19 11202628 11202642 JUN JASPAR yes 112455283
chr19 11202644 11202650 JUN TRANSFAC yes 70803705
chr19 11202644 11202650 JUN TRANSFAC yes 112455284
chr19 11202663 11202674 HOXC11 JASPAR yes 70803706
chr19 11202663 11202674 HOXC12 JASPAR yes 70803707
chr19 11202663 11202674 HOXC13 JASPAR yes 70803708
chr19 11202663 11202674 HOXD12 JASPAR yes 70803709
chr19 11202663 11202674 HOXC11 JASPAR yes 112455285
chr19 11202663 11202674 HOXC12 JASPAR yes 112455286
chr19 11202663 11202674 HOXC13 JASPAR yes 112455287
chr19 11202663 11202674 HOXD12 JASPAR yes 112455288
chr19 11202666 11202669 MYB TRANSFAC yes 70803710
chr19 11202666 11202669 MYB TRANSFAC yes 112455289
chr19 11202677 11202690 NFKB1 JASPAR yes 70803711
chr19 11202677 11202690 NFKB2 JASPAR yes 70803712
chr19 11202677 11202690 NFKB1 JASPAR yes 112455290
chr19 11202677 11202690 NFKB2 JASPAR yes 112455291
chr19 11202678 11202691 NFKB1 JASPAR yes 70803713
chr19 11202678 11202691 NFKB1 JASPAR yes 112455292
chr19 11202692 11202703 ELK4 JASPAR yes 70803714
chr19 11202692 11202703 ELK4 JASPAR yes 112455293
chr19 11202693 11202697 YY1 TRANSFAC yes 70803715
chr19 11202693 11202697 YY1 TRANSFAC yes 112455294
chr19 11202693 11202703 ELK1 JASPAR yes 70803716
chr19 11202693 11202703 ELK3 JASPAR yes 70803717
chr19 11202693 11202703 ERG JASPAR yes 70803718
chr19 11202693 11202703 ETS1 JASPAR yes 70803719
chr19 11202693 11202703 ETV1 JASPAR yes 70803720
chr19 11202693 11202703 ETV3 JASPAR yes 70803721
chr19 11202693 11202703 ETV4 JASPAR yes 70803722
chr19 11202693 11202703 FEV JASPAR yes 70803723
chr19 11202693 11202703 FLI1 JASPAR yes 70803724
chr19 11202693 11202703 ELK1 JASPAR yes 112455295
chr19 11202693 11202703 ELK3 JASPAR yes 112455296
chr19 11202693 11202703 ERG JASPAR yes 112455297
chr19 11202693 11202703 ETS1 JASPAR yes 112455298
chr19 11202693 11202703 ETV1 JASPAR yes 112455299
chr19 11202693 11202703 ETV3 JASPAR yes 112455300
chr19 11202693 11202703 ETV4 JASPAR yes 112455301
chr19 11202693 11202703 FEV JASPAR yes 112455302
chr19 11202693 11202703 FLI1 JASPAR yes 112455303
chr19 11202693 11202705 EHF JASPAR yes 70803725
chr19 11202693 11202705 ELF1 JASPAR yes 70803726
chr19 11202693 11202705 ELF4 JASPAR yes 70803727
chr19 11202693 11202705 EHF JASPAR yes 112455304
chr19 11202693 11202705 ELF1 JASPAR yes 112455305
chr19 11202693 11202705 ELF4 JASPAR yes 112455306
chr19 11202694 11202702 FEV JASPAR yes 70803728
chr19 11202694 11202702 FEV JASPAR yes 112455307
chr19 11202694 11202703 ELK4 JASPAR yes 70803729
chr19 11202694 11202703 ELK4 JASPAR yes 112455308
chr19 11202694 11202705 STAT1 JASPAR yes 70803730
chr19 11202694 11202705 STAT3 JASPAR yes 70803731
chr19 11202694 11202705 STAT1 JASPAR yes 112455309
chr19 11202694 11202705 STAT3 JASPAR yes 112455310
chr19 11202695 11202701 ETS1 JASPAR yes 70803732
chr19 11202695 11202701 ETS1 JASPAR yes 112455311
chr19 11202695 11202706 STAT1 JASPAR yes 70803733
chr19 11202695 11202706 STAT3 JASPAR yes 70803734
chr19 11202695 11202706 STAT1 JASPAR yes 112455312
chr19 11202695 11202706 STAT3 JASPAR yes 112455313
chr19 11202695 11202707 EHF JASPAR yes 70803735
chr19 11202695 11202707 ELF1 JASPAR yes 70803736
chr19 11202695 11202707 ELF4 JASPAR yes 70803737
chr19 11202695 11202707 EHF JASPAR yes 112455314
chr19 11202695 11202707 ELF1 JASPAR yes 112455315
chr19 11202695 11202707 ELF4 JASPAR yes 112455316
chr19 11202697 11202706 ELK4 JASPAR yes 70803738
chr19 11202697 11202706 ELK4 JASPAR yes 112455317
chr19 11202697 11202707 ELK1 JASPAR yes 70803739
chr19 11202697 11202707 ELK3 JASPAR yes 70803740
chr19 11202697 11202707 ERG JASPAR yes 70803741
chr19 11202697 11202707 ETS1 JASPAR yes 70803742
chr19 11202697 11202707 ETV1 JASPAR yes 70803743
chr19 11202697 11202707 ETV4 JASPAR yes 70803744
chr19 11202697 11202707 FEV JASPAR yes 70803745
chr19 11202697 11202707 FLI1 JASPAR yes 70803746
chr19 11202697 11202707 ELK1 JASPAR yes 112455318
chr19 11202697 11202707 ELK3 JASPAR yes 112455319
chr19 11202697 11202707 ERG JASPAR yes 112455320
chr19 11202697 11202707 ETS1 JASPAR yes 112455321
chr19 11202697 11202707 ETV1 JASPAR yes 112455322
chr19 11202697 11202707 ETV4 JASPAR yes 112455323
chr19 11202697 11202707 FEV JASPAR yes 112455324
chr19 11202697 11202707 FLI1 JASPAR yes 112455325
chr19 11202698 11202706 FEV JASPAR yes 70803747
chr19 11202698 11202706 FEV JASPAR yes 112455326
chr19 11202699 11202705 ETS1 JASPAR yes 70803748
chr19 11202699 11202705 ETS1 JASPAR yes 112455327
chr19 11202708 11202712 NFE TRANSFAC yes 70803749
chr19 11202708 11202712 NFE TRANSFAC yes 112455328
chr19 11202708 11202713 GATA1 TRANSFAC yes 70803750
chr19 11202708 11202713 GATA1 TRANSFAC yes 112455329
chr19 11202708 11202714 GATA3 JASPAR yes 70803751
chr19 11202708 11202714 GATA3 JASPAR yes 112455330
chr19 11202745 11202751 LEF1 TRANSFAC yes 70803752
chr19 11202745 11202751 SOX10 JASPAR yes 70803753
chr19 11202745 11202751 LEF1 TRANSFAC yes 112455331
chr19 11202745 11202751 SOX10 JASPAR yes 112455332
chr19 11202790 11202804 GATA2 JASPAR yes 70803754
chr19 11202790 11202804 GATA2 JASPAR yes 112455333
chr19 11202794 11202802 GATA3 JASPAR yes 70803755
chr19 11202794 11202802 GATA5 JASPAR yes 70803756
chr19 11202794 11202802 GATA3 JASPAR yes 112455334
chr19 11202794 11202802 GATA5 JASPAR yes 112455335
chr19 11202805 11202818 ELF1 JASPAR yes 70803757
chr19 11202805 11202818 ELF1 JASPAR yes 112455336
chr19 11202806 11202813 SPI1 JASPAR yes 70803758
chr19 11202806 11202813 SPI1 JASPAR yes 112455337
chr19 11202806 11202814 EHF JASPAR yes 70803759
chr19 11202806 11202814 EHF JASPAR yes 112455338
chr19 11202814 11202828 GATA2 JASPAR yes 70803760
chr19 11202814 11202828 GATA2 JASPAR yes 112455339
chr19 11202816 11202822 GATA1 TRANSFAC yes 70803761
chr19 11202816 11202822 GATA1 TRANSFAC yes 112455340
chr19 11202816 11202824 GATA5 JASPAR yes 70803762
chr19 11202816 11202824 GATA5 JASPAR yes 112455341
chr19 11202825 11202829 H1TF2 TRANSFAC yes 70803763
chr19 11202825 11202829 NFE TRANSFAC yes 70803764
chr19 11202825 11202829 SRF TRANSFAC yes 70803765
chr19 11202825 11202829 H1TF2 TRANSFAC yes 112455342
chr19 11202825 11202829 NFE TRANSFAC yes 112455343
chr19 11202825 11202829 SRF TRANSFAC yes 112455344
chr19 11202829 11202842 HSF2 JASPAR yes 70803766
chr19 11202829 11202842 HSF4 JASPAR yes 70803767
chr19 11202829 11202842 HSF2 JASPAR yes 112455345
chr19 11202829 11202842 HSF4 JASPAR yes 112455346
SNP sites on vista28615[chr19:11202212-11202837]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 11202306 rs6511720 G T
POLR2A
5441054
chr19 11202356 rs375480781 T C
IRF1 IRF2 POLR2A PRDM1 STAT1 STAT2
5441055
chr19 11202460 rs17242787 T A
FOSL2 HSF1 HSF2 HSF4 JUND POLR2A
5441056
chr19 11202516 rs8104549 G C
FOS FOSL2 JUND POLR2A
5441057
chr19 11202568 rs564232452 C T
FOS FOSL2 JUND POLR2A RUNX2
5441058
chr19 11202569 rs8104576 G A,T
FOS FOSL2 JUND POLR2A RUNX2
5441059
chr19 11202575 rs546639142 C G
FOS FOSL2 JUND POLR2A
5441060
Genes possibly regulated by vista28615[chr19:11202212-11202837]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 11200038 11244492 + LDLR ENSG00000130164.7 11200038 0.9 1.0 17029 97826
chr19 11242196 11266484 - SPC24 ENSG00000161888.7 11266484 0.92 1.0 17030 36353
Expression level of Genes
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miRNAs possibly regulated by vista28615[chr19:11202212-11202837]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results