EnhancerDB
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  3. vista28616[chr19:11202963-11203178]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28616[chr19:11202963-11203178]
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Tissue distribution of vista28616
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Transcription factor that possibly regulate vista28616[chr19:11202963-11203178]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 11199654 11203833 POLR2A UCSC Txn Factor no Conserved 108384248
chr19 11199654 11203833 POLR2A UCSC Txn Factor no Conserved 108384249
chr19 11202956 11202963 MEIS1 JASPAR yes 70803768
chr19 11202956 11202963 MEIS1 JASPAR yes 112455362
chr19 11202972 11202991 RFX2 JASPAR yes 70803769
chr19 11202972 11202991 RFX2 JASPAR yes 112455363
chr19 11202973 11202979 TCF4 TRANSFAC yes 70803770
chr19 11202973 11202979 TCF4 TRANSFAC yes 112455364
chr19 11202974 11202989 RFX5 JASPAR yes 70803771
chr19 11202974 11202989 RFX5 JASPAR yes 112455365
chr19 11202998 11203001 MYB TRANSFAC yes 70803772
chr19 11202998 11203001 MYB TRANSFAC yes 112455366
chr19 11203013 11203027 JUN JASPAR yes 70803773
chr19 11203013 11203027 JUN JASPAR yes 112455367
chr19 11203016 11203027 FOSL2 JASPAR yes 70803774
chr19 11203016 11203027 JUNB JASPAR yes 70803775
chr19 11203016 11203027 FOSL2 JASPAR yes 112455368
chr19 11203016 11203027 JUNB JASPAR yes 112455369
chr19 11203017 11203028 FOS JASPAR yes 70803776
chr19 11203017 11203028 FOSL1 JASPAR yes 70803777
chr19 11203017 11203028 JUND JASPAR yes 70803778
chr19 11203017 11203028 FOS JASPAR yes 112455370
chr19 11203017 11203028 FOSL1 JASPAR yes 112455371
chr19 11203017 11203028 JUND JASPAR yes 112455372
chr19 11203018 11203032 JUN JASPAR yes 70803779
chr19 11203018 11203032 JUN JASPAR yes 112455373
chr19 11203019 11203026 JUN TRANSFAC yes 70803780
chr19 11203019 11203026 JUN TRANSFAC yes 112455374
chr19 11203034 11203040 ETS1 JASPAR yes 70803781
chr19 11203034 11203040 SPI1 JASPAR yes 70803782
chr19 11203034 11203040 ETS1 JASPAR yes 112455375
chr19 11203034 11203040 SPI1 JASPAR yes 112455376
chr19 11203034 11203044 ELK1 JASPAR yes 70803783
chr19 11203034 11203044 ELK1 JASPAR yes 112455377
chr19 11203034 11203046 ELF4 JASPAR yes 70803784
chr19 11203034 11203046 ELF4 JASPAR yes 112455378
chr19 11203036 11203045 ELK4 JASPAR yes 70803785
chr19 11203036 11203045 ELK4 JASPAR yes 112455379
chr19 11203036 11203046 ELK1 JASPAR yes 70803786
chr19 11203036 11203046 ELK3 JASPAR yes 70803787
chr19 11203036 11203046 ERG JASPAR yes 70803788
chr19 11203036 11203046 ETV1 JASPAR yes 70803789
chr19 11203036 11203046 ETV4 JASPAR yes 70803790
chr19 11203036 11203046 ETV5 JASPAR yes 70803791
chr19 11203036 11203046 FEV JASPAR yes 70803792
chr19 11203036 11203046 FLI1 JASPAR yes 70803793
chr19 11203036 11203046 ELK1 JASPAR yes 112455380
chr19 11203036 11203046 ELK3 JASPAR yes 112455381
chr19 11203036 11203046 ERG JASPAR yes 112455382
chr19 11203036 11203046 ETV1 JASPAR yes 112455383
chr19 11203036 11203046 ETV4 JASPAR yes 112455384
chr19 11203036 11203046 ETV5 JASPAR yes 112455385
chr19 11203036 11203046 FEV JASPAR yes 112455386
chr19 11203036 11203046 FLI1 JASPAR yes 112455387
chr19 11203036 11203047 ELK4 JASPAR yes 70803794
chr19 11203036 11203047 ELK4 JASPAR yes 112455388
chr19 11203038 11203044 ETS1 JASPAR yes 70803795
chr19 11203038 11203044 SPI1 JASPAR yes 70803796
chr19 11203038 11203044 ETS1 JASPAR yes 112455389
chr19 11203038 11203044 SPI1 JASPAR yes 112455390
chr19 11203043 11203057 ONECUT1 JASPAR yes 70803797
chr19 11203043 11203057 ONECUT2 JASPAR yes 70803798
chr19 11203043 11203057 ONECUT3 JASPAR yes 70803799
chr19 11203043 11203057 ONECUT1 JASPAR yes 112455391
chr19 11203043 11203057 ONECUT2 JASPAR yes 112455392
chr19 11203043 11203057 ONECUT3 JASPAR yes 112455393
chr19 11203046 11203056 PAX3 JASPAR yes 70803800
chr19 11203046 11203056 PAX7 JASPAR yes 70803801
chr19 11203046 11203056 PAX3 JASPAR yes 112455394
chr19 11203046 11203056 PAX7 JASPAR yes 112455395
chr19 11203048 11203066 MAFF JASPAR yes 70803802
chr19 11203048 11203066 MAFF JASPAR yes 112455396
chr19 11203050 11203061 NRL JASPAR yes 70803803
chr19 11203050 11203061 NRL JASPAR yes 112455397
chr19 11203064 11203075 EBF1 JASPAR yes 70803804
chr19 11203064 11203075 EBF1 JASPAR yes 112455398
chr19 11203068 11203073 TFAP2A TRANSFAC yes 70803805
chr19 11203068 11203073 TFAP2A TRANSFAC yes 112455399
chr19 11203068 11203074 MZF1 JASPAR yes 70803806
chr19 11203068 11203074 MZF1 JASPAR yes 112455400
chr19 11203070 11203081 NFKB1 JASPAR yes 70803807
chr19 11203070 11203081 NFKB1 JASPAR yes 112455401
chr19 11203078 11203096 SRF JASPAR yes 70803808
chr19 11203078 11203096 SRF JASPAR yes 112455402
chr19 11203080 11203096 SRF JASPAR yes 70803809
chr19 11203080 11203096 SRF JASPAR yes 112455403
chr19 11203080 11203098 SRF JASPAR yes 70803810
chr19 11203080 11203098 SRF JASPAR yes 112455404
chr19 11203081 11203093 SRF JASPAR yes 70803811
chr19 11203081 11203093 SRF JASPAR yes 112455405
chr19 11203083 11203095 SRF JASPAR yes 70803812
chr19 11203083 11203095 SRF JASPAR yes 112455406
chr19 11203086 11203090 YY1 TRANSFAC yes 70803813
chr19 11203086 11203090 YY1 TRANSFAC yes 112455407
chr19 11203118 11203122 YY1 TRANSFAC yes 70803814
chr19 11203118 11203122 YY1 TRANSFAC yes 112455408
chr19 11203119 11203134 FOXP1 JASPAR yes 70803815
chr19 11203119 11203134 FOXP1 JASPAR yes 112455409
chr19 11203120 11203135 FOXP1 JASPAR yes 70803816
chr19 11203120 11203135 FOXP1 JASPAR yes 112455410
chr19 11203121 11203136 FOXP1 JASPAR yes 70803817
chr19 11203121 11203136 FOXP1 JASPAR yes 112455411
chr19 11203122 11203137 FOXP1 JASPAR yes 70803818
chr19 11203122 11203137 FOXP1 JASPAR yes 112455412
chr19 11203123 11203143 RREB1 JASPAR yes 70803819
chr19 11203123 11203143 RREB1 JASPAR yes 112455413
chr19 11203142 11203161 PAX5 JASPAR yes 70803820
chr19 11203142 11203161 PAX5 JASPAR yes 112455414
chr19 11203149 11203157 MEIS3 JASPAR yes 70803821
chr19 11203149 11203157 MEIS3 JASPAR yes 112455415
chr19 11203150 11203154 NFE TRANSFAC yes 70803822
chr19 11203150 11203154 NFE TRANSFAC yes 112455416
chr19 11203171 11203183 HLF JASPAR yes 70803823
chr19 11203171 11203183 HLF JASPAR yes 112455417
chr19 11203172 11203185 JUN JASPAR yes 70803824
chr19 11203172 11203185 JUN JASPAR yes 112455418
SNP sites on vista28616[chr19:11202963-11203178]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 11203065 rs557384433 ACT A
EBF1 MAFF POLR2A
5441061
chr19 11203104 rs568807185 TG T
POLR2A
5441062
Genes possibly regulated by vista28616[chr19:11202963-11203178]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 11200038 11244492 + LDLR ENSG00000130164.7 11200038 0.9 1.0 17029 97075
chr19 11242196 11266484 - SPC24 ENSG00000161888.7 11266484 0.92 1.0 17030 36694
Expression level of Genes
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miRNAs possibly regulated by vista28616[chr19:11202963-11203178]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results