EnhancerDB
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  3. vista28617[chr19:11205696-11206011]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28617[chr19:11205696-11206011]
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Tissue distribution of vista28617
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Transcription factor that possibly regulate vista28617[chr19:11205696-11206011]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 11205101 11206226 POLR2A UCSC Txn Factor no Conserved 108384355
chr19 11205545 11206049 TCF7L2 UCSC Txn Factor no Conserved 108384362
chr19 11205625 11206165 EP300 UCSC Txn Factor no Conserved 108384374
chr19 11205642 11206082 TEAD4 UCSC Txn Factor no Conserved 108384383
chr19 11205712 11206065 JUND UCSC Txn Factor no Conserved 108384407
chr19 11205730 11206070 JUN UCSC Txn Factor no Conserved 108384422
chr19 11205765 11206049 FOSL2 UCSC Txn Factor no Conserved 108384448
chr19 11205782 11206100 CEBPB UCSC Txn Factor no Conserved 108384460
chr19 11205785 11206010 JUNB UCSC Txn Factor no Conserved 108384461
chr19 11205789 11205987 BATF UCSC Txn Factor no Conserved 108384466
chr19 11205790 11205918 PRDM1 UCSC Txn Factor no Conserved 108384468
chr19 11205792 11206064 FOS UCSC Txn Factor no Conserved 108384472
chr19 11205798 11206008 FOSL1 UCSC Txn Factor no Conserved 108384475
chr19 11205813 11205981 ATF3 UCSC Txn Factor no Conserved 108384486
chr19 11205821 11206083 FOXA1 UCSC Txn Factor no Conserved 108384491
chr19 11205844 11206078 FOXA2 UCSC Txn Factor no Conserved 108384507
chr19 11205723 11205732 PITX3 JASPAR yes 70803825
chr19 11205723 11205732 PITX3 JASPAR yes 112455808
chr19 11205732 11205736 ESR1 TRANSFAC yes 70803826
chr19 11205732 11205736 ESR1 TRANSFAC yes 112455809
chr19 11205747 11205751 ESR1 TRANSFAC yes 70803827
chr19 11205747 11205751 ESR1 TRANSFAC yes 112455810
chr19 11205748 11205760 HNF1B JASPAR yes 70803828
chr19 11205748 11205760 HNF1B JASPAR yes 112455811
chr19 11205756 11205766 SREBF1 JASPAR yes 70803829
chr19 11205756 11205766 SREBF2 JASPAR yes 70803830
chr19 11205756 11205766 SREBF1 JASPAR yes 112455812
chr19 11205756 11205766 SREBF2 JASPAR yes 112455813
chr19 11205791 11205800 NFIX JASPAR yes 70803831
chr19 11205791 11205800 NFIX JASPAR yes 112455814
chr19 11205793 11205799 NFIC JASPAR yes 70803832
chr19 11205793 11205799 NFIC JASPAR yes 112455815
chr19 11205807 11205825 IRF2 JASPAR yes 70803833
chr19 11205807 11205825 IRF2 JASPAR yes 112455816
chr19 11205808 11205829 IRF1 JASPAR yes 70803834
chr19 11205808 11205829 IRF1 JASPAR yes 112455817
chr19 11205810 11205825 PRDM1 JASPAR yes 70803835
chr19 11205810 11205825 STAT2 JASPAR yes 70803836
chr19 11205810 11205825 PRDM1 JASPAR yes 112455818
chr19 11205810 11205825 STAT2 JASPAR yes 112455819
chr19 11205815 11205820 ETS2 TRANSFAC yes 70803837
chr19 11205815 11205820 ETS2 TRANSFAC yes 112455820
chr19 11205823 11205827 YY1 TRANSFAC yes 70803838
chr19 11205823 11205827 YY1 TRANSFAC yes 112455821
chr19 11205861 11205875 ZIC1 JASPAR yes 70803839
chr19 11205861 11205875 ZIC1 JASPAR yes 112455822
chr19 11205861 11205876 ZIC3 JASPAR yes 70803840
chr19 11205861 11205876 ZIC4 JASPAR yes 70803841
chr19 11205861 11205876 ZIC3 JASPAR yes 112455823
chr19 11205861 11205876 ZIC4 JASPAR yes 112455824
chr19 11205869 11205887 MAFF JASPAR yes 70803842
chr19 11205869 11205887 MAFF JASPAR yes 112455825
chr19 11205870 11205885 MAFK JASPAR yes 70803843
chr19 11205870 11205885 MAFK JASPAR yes 112455826
chr19 11205874 11205885 NRL JASPAR yes 70803844
chr19 11205874 11205885 NRL JASPAR yes 112455827
chr19 11205882 11205896 JUN JASPAR yes 70803845
chr19 11205882 11205896 JUN JASPAR yes 112455828
chr19 11205883 11205889 HiNF-A TRANSFAC yes 70803846
chr19 11205883 11205889 HiNF-A TRANSFAC yes 112455829
chr19 11205884 11205895 BATF JASPAR yes 70803847
chr19 11205884 11205895 BATF JASPAR yes 112455830
chr19 11205885 11205896 FOSL2 JASPAR yes 70803848
chr19 11205885 11205896 JUNB JASPAR yes 70803849
chr19 11205885 11205896 FOSL2 JASPAR yes 112455831
chr19 11205885 11205896 JUNB JASPAR yes 112455832
chr19 11205886 11205897 FOS JASPAR yes 70803850
chr19 11205886 11205897 FOSL1 JASPAR yes 70803851
chr19 11205886 11205897 JUND JASPAR yes 70803852
chr19 11205886 11205897 NFE2 JASPAR yes 70803853
chr19 11205886 11205897 FOS JASPAR yes 112455833
chr19 11205886 11205897 FOSL1 JASPAR yes 112455834
chr19 11205886 11205897 JUND JASPAR yes 112455835
chr19 11205886 11205897 NFE2 JASPAR yes 112455836
chr19 11205887 11205896 JDP2 JASPAR yes 70803854
chr19 11205887 11205896 JDP2 JASPAR yes 112455837
chr19 11205887 11205898 FOSL2 JASPAR yes 70803855
chr19 11205887 11205898 JUNB JASPAR yes 70803856
chr19 11205887 11205898 FOSL2 JASPAR yes 112455838
chr19 11205887 11205898 JUNB JASPAR yes 112455839
chr19 11205887 11205901 JUN JASPAR yes 70803857
chr19 11205887 11205901 JUN JASPAR yes 112455840
chr19 11205888 11205899 BATF JASPAR yes 70803858
chr19 11205888 11205899 BATF JASPAR yes 112455841
chr19 11205892 11205903 FLI1 JASPAR yes 70803859
chr19 11205892 11205903 FLI1 JASPAR yes 112455842
chr19 11205892 11205905 ELF3 JASPAR yes 70803860
chr19 11205892 11205905 ELF3 JASPAR yes 112455843
chr19 11205893 11205897 YY1 TRANSFAC yes 70803861
chr19 11205893 11205897 YY1 TRANSFAC yes 112455844
chr19 11205893 11205906 ELF1 JASPAR yes 70803862
chr19 11205893 11205906 ELF1 JASPAR yes 112455845
chr19 11205894 11205902 FEV JASPAR yes 70803863
chr19 11205894 11205902 FEV JASPAR yes 112455846
chr19 11205911 11205916 MYC TRANSFAC yes 70803864
chr19 11205911 11205916 MYC TRANSFAC yes 112455847
chr19 11205922 11205936 JUN JASPAR yes 70803865
chr19 11205922 11205936 JUN JASPAR yes 112455848
chr19 11205923 11205936 SMAD2 JASPAR yes 70803866
chr19 11205923 11205936 SMAD2 JASPAR yes 112455849
chr19 11205925 11205936 FOSL2 JASPAR yes 70803867
chr19 11205925 11205936 JUNB JASPAR yes 70803868
chr19 11205925 11205936 FOSL2 JASPAR yes 112455850
chr19 11205925 11205936 JUNB JASPAR yes 112455851
chr19 11205926 11205937 FOS JASPAR yes 70803869
chr19 11205926 11205937 FOSL1 JASPAR yes 70803870
chr19 11205926 11205937 JUND JASPAR yes 70803871
chr19 11205926 11205937 FOS JASPAR yes 112455852
chr19 11205926 11205937 FOSL1 JASPAR yes 112455853
chr19 11205926 11205937 JUND JASPAR yes 112455854
chr19 11205928 11205935 JUN TRANSFAC yes 70803872
chr19 11205928 11205935 JUN TRANSFAC yes 112455855
chr19 11205938 11205946 TBX5 JASPAR yes 70803873
chr19 11205938 11205946 TBX5 JASPAR yes 112455856
chr19 11205955 11205970 ZIC3 JASPAR yes 70803874
chr19 11205955 11205970 ZIC3 JASPAR yes 112455857
chr19 11205955 11205971 GLIS1 JASPAR yes 70803875
chr19 11205955 11205971 GLIS1 JASPAR yes 112455858
chr19 11205977 11205984 MEIS1 JASPAR yes 70803876
chr19 11205977 11205984 MEIS1 JASPAR yes 112455859
chr19 11205977 11205985 MEIS2 JASPAR yes 70803877
chr19 11205977 11205985 MEIS2 JASPAR yes 112455860
chr19 11205994 11205998 LFA1 TRANSFAC yes 70803878
chr19 11205994 11205998 LFA1 TRANSFAC yes 112455861
SNP sites on vista28617[chr19:11205696-11206011]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 11205754 rs76106226 C T
EP300 HNF1B JUN JUND POLR2A TCF7L2 TEAD4
5441103
chr19 11205885 rs148516070 GA G
ATF3 BATF CEBPB EP300 FOS FOSL1 FOSL2 FOXA1 FOXA2 HiNF-A JUN JUNB JUND MAFF MAFK NRL POLR2A PRDM1 TCF7L2 TEAD4
5441104
chr19 11205919 rs549174926 A G
ATF3 BATF CEBPB EP300 FOS FOSL1 FOSL2 FOXA1 FOXA2 JUN JUNB JUND POLR2A TCF7L2 TEAD4
5441105
chr19 11205975 rs8102912 G A
ATF3 BATF CEBPB EP300 FOS FOSL1 FOSL2 FOXA1 FOXA2 JUN JUNB JUND POLR2A TCF7L2 TEAD4
5441106
Genes possibly regulated by vista28617[chr19:11205696-11206011]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 11200038 11244492 + LDLR ENSG00000130164.7 11200038 0.9 1.0 17029 94342
chr19 11242196 11266484 - SPC24 ENSG00000161888.7 11266484 0.92 1.0 17030 39527
Expression level of Genes
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miRNAs possibly regulated by vista28617[chr19:11205696-11206011]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results