EnhancerDB
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  3. vista28618[chr19:11206953-11207150]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28618[chr19:11206953-11207150]
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Tissue distribution of vista28618
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Transcription factor that possibly regulate vista28618[chr19:11206953-11207150]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 11206874 11207274 FOS UCSC Txn Factor no Conserved 108384531
chr19 11206947 11206962 PRDM1 JASPAR yes 70803879
chr19 11206947 11206962 PRDM1 JASPAR yes 112455996
chr19 11206963 11206984 IRF1 JASPAR yes 70803880
chr19 11206963 11206984 IRF1 JASPAR yes 112455997
chr19 11206965 11206980 IRF9 JASPAR yes 70803881
chr19 11206965 11206980 IRF9 JASPAR yes 112455998
chr19 11206966 11206980 IRF7 JASPAR yes 70803882
chr19 11206966 11206980 IRF8 JASPAR yes 70803883
chr19 11206966 11206980 IRF7 JASPAR yes 112455999
chr19 11206966 11206980 IRF8 JASPAR yes 112456000
chr19 11206967 11206981 SPIC JASPAR yes 70803884
chr19 11206967 11206981 STAT1 JASPAR yes 70803885
chr19 11206967 11206981 SPIC JASPAR yes 112456001
chr19 11206967 11206981 STAT1 JASPAR yes 112456002
chr19 11206967 11206982 PRDM1 JASPAR yes 70803886
chr19 11206967 11206982 STAT2 JASPAR yes 70803887
chr19 11206967 11206982 PRDM1 JASPAR yes 112456003
chr19 11206967 11206982 STAT2 JASPAR yes 112456004
chr19 11206967 11206985 IRF2 JASPAR yes 70803888
chr19 11206967 11206985 IRF2 JASPAR yes 112456005
chr19 11206968 11206989 ZNF263 JASPAR yes 70803889
chr19 11206968 11206989 ZNF263 JASPAR yes 112456006
chr19 11206969 11206990 IRF1 JASPAR yes 70803890
chr19 11206969 11206990 IRF1 JASPAR yes 112456007
chr19 11206989 11207000 DMRT3 JASPAR yes 70803891
chr19 11206989 11207000 DMRT3 JASPAR yes 112456008
chr19 11207014 11207026 POU2F1 JASPAR yes 70803892
chr19 11207014 11207026 POU2F1 JASPAR yes 112456009
chr19 11207014 11207027 POU3F3 JASPAR yes 70803893
chr19 11207014 11207027 POU3F3 JASPAR yes 112456010
chr19 11207014 11207028 POU1F1 JASPAR yes 70803894
chr19 11207014 11207028 POU1F1 JASPAR yes 112456011
chr19 11207015 11207027 POU3F1 JASPAR yes 70803895
chr19 11207015 11207027 POU3F2 JASPAR yes 70803896
chr19 11207015 11207027 POU3F1 JASPAR yes 112456012
chr19 11207015 11207027 POU3F2 JASPAR yes 112456013
chr19 11207016 11207025 POU3F4 JASPAR yes 70803897
chr19 11207016 11207025 POU5F1B JASPAR yes 70803898
chr19 11207016 11207025 POU3F4 JASPAR yes 112456014
chr19 11207016 11207025 POU5F1B JASPAR yes 112456015
chr19 11207018 11207029 HOXA10 JASPAR yes 70803899
chr19 11207018 11207029 HOXA10 JASPAR yes 112456016
chr19 11207019 11207029 EMX1 JASPAR yes 70803900
chr19 11207019 11207029 EMX2 JASPAR yes 70803901
chr19 11207019 11207029 EVX1 JASPAR yes 70803902
chr19 11207019 11207029 EVX2 JASPAR yes 70803903
chr19 11207019 11207029 GBX1 JASPAR yes 70803904
chr19 11207019 11207029 GBX2 JASPAR yes 70803905
chr19 11207019 11207029 GSX2 JASPAR yes 70803906
chr19 11207019 11207029 HESX1 JASPAR yes 70803907
chr19 11207019 11207029 HOXA2 JASPAR yes 70803908
chr19 11207019 11207029 HOXB2 JASPAR yes 70803909
chr19 11207019 11207029 HOXB3 JASPAR yes 70803910
chr19 11207019 11207029 LHX2 JASPAR yes 70803911
chr19 11207019 11207029 LHX6 JASPAR yes 70803912
chr19 11207019 11207029 MEOX1 JASPAR yes 70803913
chr19 11207019 11207029 MEOX2 JASPAR yes 70803914
chr19 11207019 11207029 MIXL1 JASPAR yes 70803915
chr19 11207019 11207029 MNX1 JASPAR yes 70803916
chr19 11207019 11207029 NOTO JASPAR yes 70803917
chr19 11207019 11207029 RAX JASPAR yes 70803918
chr19 11207019 11207029 EMX1 JASPAR yes 112456017
chr19 11207019 11207029 EMX2 JASPAR yes 112456018
chr19 11207019 11207029 EVX1 JASPAR yes 112456019
chr19 11207019 11207029 EVX2 JASPAR yes 112456020
chr19 11207019 11207029 GBX1 JASPAR yes 112456021
chr19 11207019 11207029 GBX2 JASPAR yes 112456022
chr19 11207019 11207029 GSX2 JASPAR yes 112456023
chr19 11207019 11207029 HESX1 JASPAR yes 112456024
chr19 11207019 11207029 HOXA2 JASPAR yes 112456025
chr19 11207019 11207029 HOXB2 JASPAR yes 112456026
chr19 11207019 11207029 HOXB3 JASPAR yes 112456027
chr19 11207019 11207029 LHX2 JASPAR yes 112456028
chr19 11207019 11207029 LHX6 JASPAR yes 112456029
chr19 11207019 11207029 MEOX1 JASPAR yes 112456030
chr19 11207019 11207029 MEOX2 JASPAR yes 112456031
chr19 11207019 11207029 MIXL1 JASPAR yes 112456032
chr19 11207019 11207029 MNX1 JASPAR yes 112456033
chr19 11207019 11207029 NOTO JASPAR yes 112456034
chr19 11207019 11207029 RAX JASPAR yes 112456035
chr19 11207020 11207028 LMX1A JASPAR yes 70803919
chr19 11207020 11207028 LMX1B JASPAR yes 70803920
chr19 11207020 11207028 NKX6-1 JASPAR yes 70803921
chr19 11207020 11207028 NKX6-2 JASPAR yes 70803922
chr19 11207020 11207028 PDX1 JASPAR yes 70803923
chr19 11207020 11207028 VAX1 JASPAR yes 70803924
chr19 11207020 11207028 VAX2 JASPAR yes 70803925
chr19 11207020 11207028 VSX1 JASPAR yes 70803926
chr19 11207020 11207028 LMX1A JASPAR yes 112456036
chr19 11207020 11207028 LMX1B JASPAR yes 112456037
chr19 11207020 11207028 NKX6-1 JASPAR yes 112456038
chr19 11207020 11207028 NKX6-2 JASPAR yes 112456039
chr19 11207020 11207028 PDX1 JASPAR yes 112456040
chr19 11207020 11207028 VAX1 JASPAR yes 112456041
chr19 11207020 11207028 VAX2 JASPAR yes 112456042
chr19 11207020 11207028 VSX1 JASPAR yes 112456043
chr19 11207020 11207030 POU6F2 JASPAR yes 70803927
chr19 11207020 11207030 POU6F2 JASPAR yes 112456044
chr19 11207053 11207066 ELF1 JASPAR yes 70803928
chr19 11207053 11207066 ELF1 JASPAR yes 112456045
chr19 11207054 11207067 ELF3 JASPAR yes 70803929
chr19 11207054 11207067 ELF3 JASPAR yes 112456046
chr19 11207056 11207062 PEA3 TRANSFAC yes 70803930
chr19 11207056 11207062 PEA3 TRANSFAC yes 112456047
chr19 11207056 11207067 FLI1 JASPAR yes 70803931
chr19 11207056 11207067 FLI1 JASPAR yes 112456048
chr19 11207057 11207065 FEV JASPAR yes 70803932
chr19 11207057 11207065 FEV JASPAR yes 112456049
chr19 11207058 11207072 JUN JASPAR yes 70803933
chr19 11207058 11207072 JUN JASPAR yes 112456050
chr19 11207060 11207071 BATF JASPAR yes 70803934
chr19 11207060 11207071 BATF JASPAR yes 112456051
chr19 11207061 11207072 FOSL2 JASPAR yes 70803935
chr19 11207061 11207072 JUNB JASPAR yes 70803936
chr19 11207061 11207072 FOSL2 JASPAR yes 112456052
chr19 11207061 11207072 JUNB JASPAR yes 112456053
chr19 11207062 11207073 FOS JASPAR yes 70803937
chr19 11207062 11207073 FOSL1 JASPAR yes 70803938
chr19 11207062 11207073 JUND JASPAR yes 70803939
chr19 11207062 11207073 NFE2 JASPAR yes 70803940
chr19 11207062 11207073 FOS JASPAR yes 112456054
chr19 11207062 11207073 FOSL1 JASPAR yes 112456055
chr19 11207062 11207073 JUND JASPAR yes 112456056
chr19 11207062 11207073 NFE2 JASPAR yes 112456057
chr19 11207063 11207072 JDP2 JASPAR yes 70803941
chr19 11207063 11207072 JDP2 JASPAR yes 112456058
chr19 11207063 11207074 FOSL2 JASPAR yes 70803942
chr19 11207063 11207074 JUNB JASPAR yes 70803943
chr19 11207063 11207074 FOSL2 JASPAR yes 112456059
chr19 11207063 11207074 JUNB JASPAR yes 112456060
chr19 11207063 11207077 JUN JASPAR yes 70803944
chr19 11207063 11207077 JUN JASPAR yes 112456061
chr19 11207064 11207075 BATF JASPAR yes 70803945
chr19 11207064 11207075 BATF JASPAR yes 112456062
chr19 11207069 11207073 YY1 TRANSFAC yes 70803946
chr19 11207069 11207073 YY1 TRANSFAC yes 112456063
chr19 11207074 11207085 DMRT3 JASPAR yes 70803947
chr19 11207074 11207085 DMRT3 JASPAR yes 112456064
chr19 11207078 11207094 POU4F2 JASPAR yes 70803948
chr19 11207078 11207094 POU4F2 JASPAR yes 112456065
chr19 11207121 11207125 YY1 TRANSFAC yes 70803949
chr19 11207121 11207125 YY1 TRANSFAC yes 112456066
chr19 11207122 11207133 CDX2 JASPAR yes 70803950
chr19 11207122 11207133 CDX2 JASPAR yes 112456067
chr19 11207128 11207133 H4TF1 TRANSFAC yes 70803951
chr19 11207128 11207133 H4TF1 TRANSFAC yes 112456068
chr19 11207149 11207159 TEAD4 JASPAR yes 70803952
chr19 11207149 11207159 TEAD4 JASPAR yes 112456069
SNP sites on vista28618[chr19:11206953-11207150]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 11206968 rs532321156 C T
FOS IRF1 IRF2 IRF7 IRF8 IRF9 PRDM1 SPIC STAT1 STAT2 ZNF263
5441116
chr19 11206969 rs17242395 G A
FOS IRF1 IRF2 IRF7 IRF8 IRF9 PRDM1 SPIC STAT1 STAT2 ZNF263
5441117
chr19 11207102 rs1010679 T C
FOS
5441118
Genes possibly regulated by vista28618[chr19:11206953-11207150]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 11200038 11244492 + LDLR ENSG00000130164.7 11200038 0.9 1.0 17029 93085
chr19 11242196 11266484 - SPC24 ENSG00000161888.7 11266484 0.92 1.0 17030 40666
Expression level of Genes
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miRNAs possibly regulated by vista28618[chr19:11206953-11207150]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results