EnhancerDB
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  3. vista28619[chr19:11248443-11248964]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista28619[chr19:11248443-11248964]
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Tissue distribution of vista28619
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Transcription factor that possibly regulate vista28619[chr19:11248443-11248964]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr19 11248320 11248713 CTCF UCSC Txn Factor no Conserved 108384544
chr19 11248407 11248692 SMC3 UCSC Txn Factor no Conserved 108384565
chr19 11248422 11248686 RAD21 UCSC Txn Factor no Conserved 108384572
chr19 11248480 11248771 TFAP2C UCSC Txn Factor no Conserved 108384601
chr19 11248438 11248449 DUX4 JASPAR yes 70803953
chr19 11248438 11248449 DUX4 JASPAR yes 112457146
chr19 11248441 11248451 GSC JASPAR yes 70803954
chr19 11248441 11248451 GSC JASPAR yes 112457147
chr19 11248447 11248457 MZF1 JASPAR yes 70803955
chr19 11248447 11248457 MZF1 JASPAR yes 112457148
chr19 11248449 11248459 SP1 JASPAR yes 70803956
chr19 11248449 11248459 SP1 JASPAR yes 112457149
chr19 11248450 11248456 SP1 TRANSFAC yes 70803957
chr19 11248450 11248456 SP1 TRANSFAC yes 112457150
chr19 11248450 11248460 SP1 JASPAR yes 70803958
chr19 11248450 11248460 SP1 JASPAR yes 112457151
chr19 11248452 11248466 EBF1 JASPAR yes 70803959
chr19 11248452 11248466 EBF1 JASPAR yes 112457152
chr19 11248453 11248464 EBF1 JASPAR yes 70803960
chr19 11248453 11248464 EBF1 JASPAR yes 112457153
chr19 11248454 11248460 MZF1 JASPAR yes 70803961
chr19 11248454 11248460 MZF1 JASPAR yes 112457154
chr19 11248468 11248489 ZNF263 JASPAR yes 70803962
chr19 11248468 11248489 ZNF263 JASPAR yes 112457155
chr19 11248475 11248479 LFA1 TRANSFAC yes 70803963
chr19 11248475 11248479 LFA1 TRANSFAC yes 112457156
chr19 11248489 11248500 NRF1 JASPAR yes 70803964
chr19 11248489 11248500 NRF1 JASPAR yes 112457157
chr19 11248506 11248512 SOX10 JASPAR yes 70803965
chr19 11248506 11248512 SOX10 JASPAR yes 112457158
chr19 11248518 11248526 MEIS2 JASPAR yes 70803966
chr19 11248518 11248526 MEIS3 JASPAR yes 70803967
chr19 11248518 11248526 MEIS2 JASPAR yes 112457159
chr19 11248518 11248526 MEIS3 JASPAR yes 112457160
chr19 11248519 11248523 NFE TRANSFAC yes 70803968
chr19 11248519 11248523 NFE TRANSFAC yes 112457161
chr19 11248534 11248553 CTCF JASPAR yes 70803969
chr19 11248534 11248553 CTCF JASPAR yes 112457162
chr19 11248547 11248558 FLI1 JASPAR yes 70803970
chr19 11248547 11248558 FLI1 JASPAR yes 112457163
chr19 11248548 11248561 ELF1 JASPAR yes 70803971
chr19 11248548 11248561 ELF1 JASPAR yes 112457164
chr19 11248549 11248556 SPI1 JASPAR yes 70803972
chr19 11248549 11248556 SPI1 JASPAR yes 112457165
chr19 11248549 11248557 FEV JASPAR yes 70803973
chr19 11248549 11248557 FEV JASPAR yes 112457166
chr19 11248551 11248556 ETS2 TRANSFAC yes 70803974
chr19 11248551 11248556 ETS2 TRANSFAC yes 112457167
chr19 11248551 11248562 FLI1 JASPAR yes 70803975
chr19 11248551 11248562 FLI1 JASPAR yes 112457168
chr19 11248552 11248573 ZNF263 JASPAR yes 70803976
chr19 11248552 11248573 ZNF263 JASPAR yes 112457169
chr19 11248553 11248561 EHF JASPAR yes 70803977
chr19 11248553 11248561 EHF JASPAR yes 112457170
chr19 11248560 11248574 SPI1 JASPAR yes 70803978
chr19 11248560 11248574 SPI1 JASPAR yes 112457171
chr19 11248562 11248568 ETS1 JASPAR yes 70803979
chr19 11248562 11248568 SPI1 JASPAR yes 70803980
chr19 11248562 11248568 ETS1 JASPAR yes 112457172
chr19 11248562 11248568 SPI1 JASPAR yes 112457173
chr19 11248568 11248580 IRF1 JASPAR yes 70803981
chr19 11248568 11248580 IRF1 JASPAR yes 112457174
chr19 11248568 11248582 IRF7 JASPAR yes 70803982
chr19 11248568 11248582 IRF7 JASPAR yes 112457175
chr19 11248570 11248576 TCF4 TRANSFAC yes 70803983
chr19 11248570 11248576 TCF4 TRANSFAC yes 112457176
chr19 11248593 11248598 SP1 TRANSFAC yes 70803984
chr19 11248593 11248598 SP1 TRANSFAC yes 112457177
chr19 11248594 11248605 EBF1 JASPAR yes 70803985
chr19 11248594 11248605 EBF1 JASPAR yes 112457178
chr19 11248601 11248607 MAZ TRANSFAC yes 70803986
chr19 11248601 11248607 MAZ TRANSFAC yes 112457179
chr19 11248601 11248612 E2F6 JASPAR yes 70803987
chr19 11248601 11248612 E2F6 JASPAR yes 112457180
chr19 11248601 11248616 STAT2 JASPAR yes 70803988
chr19 11248601 11248616 STAT2 JASPAR yes 112457181
chr19 11248613 11248632 REST JASPAR yes 70803989
chr19 11248613 11248632 REST JASPAR yes 112457182
chr19 11248622 11248635 ELF1 JASPAR yes 70803990
chr19 11248622 11248635 ELF1 JASPAR yes 112457183
chr19 11248625 11248635 ERF JASPAR yes 70803991
chr19 11248625 11248635 ERG JASPAR yes 70803992
chr19 11248625 11248635 ETS1 JASPAR yes 70803993
chr19 11248625 11248635 FLI1 JASPAR yes 70803994
chr19 11248625 11248635 GABPA JASPAR yes 70803995
chr19 11248625 11248635 ERF JASPAR yes 112457184
chr19 11248625 11248635 ERG JASPAR yes 112457185
chr19 11248625 11248635 ETS1 JASPAR yes 112457186
chr19 11248625 11248635 FLI1 JASPAR yes 112457187
chr19 11248625 11248635 GABPA JASPAR yes 112457188
chr19 11248625 11248636 ELK4 JASPAR yes 70803996
chr19 11248625 11248636 FLI1 JASPAR yes 70803997
chr19 11248625 11248636 ELK4 JASPAR yes 112457189
chr19 11248625 11248636 FLI1 JASPAR yes 112457190
chr19 11248660 11248670 GBX2 JASPAR yes 70803998
chr19 11248660 11248670 GBX2 JASPAR yes 112457191
chr19 11248707 11248712 GATA2 JASPAR yes 70803999
chr19 11248707 11248712 GATA2 JASPAR yes 112457192
chr19 11248722 11248728 YY1 JASPAR yes 70804000
chr19 11248722 11248728 YY1 JASPAR yes 112457193
chr19 11248737 11248743 MAZ TRANSFAC yes 70804001
chr19 11248737 11248743 MAZ TRANSFAC yes 112457194
chr19 11248739 11248753 PLAG1 JASPAR yes 70804002
chr19 11248739 11248753 PLAG1 JASPAR yes 112457195
chr19 11248762 11248780 ESR1 JASPAR yes 70804003
chr19 11248762 11248780 ESR1 JASPAR yes 112457196
chr19 11248763 11248778 MAFK JASPAR yes 70804004
chr19 11248763 11248778 MAFK JASPAR yes 112457197
chr19 11248782 11248788 MAZ TRANSFAC yes 70804005
chr19 11248782 11248788 MAZ TRANSFAC yes 112457198
chr19 11248787 11248792 SP1 TRANSFAC yes 70804006
chr19 11248787 11248792 SP1 TRANSFAC yes 112457199
chr19 11248790 11248794 LFA1 TRANSFAC yes 70804007
chr19 11248790 11248794 LFA1 TRANSFAC yes 112457200
chr19 11248801 11248814 NFKB1 JASPAR yes 70804008
chr19 11248801 11248814 NFKB2 JASPAR yes 70804009
chr19 11248801 11248814 NFKB1 JASPAR yes 112457201
chr19 11248801 11248814 NFKB2 JASPAR yes 112457202
chr19 11248808 11248814 MZF1 JASPAR yes 70804010
chr19 11248808 11248814 MZF1 JASPAR yes 112457203
chr19 11248820 11248825 SP1 TRANSFAC yes 70804011
chr19 11248820 11248825 SP1 TRANSFAC yes 112457204
chr19 11248822 11248827 TFAP2A TRANSFAC yes 70804012
chr19 11248822 11248827 TFAP2A TRANSFAC yes 112457205
chr19 11248822 11248828 MZF1 JASPAR yes 70804013
chr19 11248822 11248828 MZF1 JASPAR yes 112457206
chr19 11248823 11248833 SP1 JASPAR yes 70804014
chr19 11248823 11248833 SP1 JASPAR yes 112457207
chr19 11248844 11248849 SP1 TRANSFAC yes 70804015
chr19 11248844 11248849 SP1 TRANSFAC yes 112457208
chr19 11248848 11248852 LFA1 TRANSFAC yes 70804016
chr19 11248848 11248852 LFA1 TRANSFAC yes 112457209
chr19 11248865 11248879 RXRB JASPAR yes 70804017
chr19 11248865 11248879 RXRG JASPAR yes 70804018
chr19 11248865 11248879 RXRB JASPAR yes 112457210
chr19 11248865 11248879 RXRG JASPAR yes 112457211
chr19 11248873 11248890 RARA JASPAR yes 70804019
chr19 11248873 11248890 RXRA JASPAR yes 70804020
chr19 11248873 11248890 RARA JASPAR yes 112457212
chr19 11248873 11248890 RXRA JASPAR yes 112457213
chr19 11248880 11248895 HSF1 JASPAR yes 70804021
chr19 11248880 11248895 HSF1 JASPAR yes 112457214
chr19 11248881 11248894 HSF1 JASPAR yes 70804022
chr19 11248881 11248894 HSF2 JASPAR yes 70804023
chr19 11248881 11248894 HSF4 JASPAR yes 70804024
chr19 11248881 11248894 HSF1 JASPAR yes 112457215
chr19 11248881 11248894 HSF2 JASPAR yes 112457216
chr19 11248881 11248894 HSF4 JASPAR yes 112457217
chr19 11248920 11248931 DMRT3 JASPAR yes 70804025
chr19 11248920 11248931 DMRT3 JASPAR yes 112457218
chr19 11248927 11248943 ZNF143 JASPAR yes 70804026
chr19 11248927 11248943 ZNF143 JASPAR yes 112457219
chr19 11248938 11248953 ESR2 JASPAR yes 70804027
chr19 11248938 11248953 ESR2 JASPAR yes 112457220
chr19 11248957 11248971 IRF7 JASPAR yes 70804028
chr19 11248957 11248971 IRF7 JASPAR yes 112457221
chr19 11248957 11248972 IRF9 JASPAR yes 70804029
chr19 11248957 11248972 IRF9 JASPAR yes 112457222
SNP sites on vista28619[chr19:11248443-11248964]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr19 11248453 rs150029678 C A,T
CTCF EBF1 MZF1 RAD21 SMC3 SP1
5441364
chr19 11248502 rs8107304 C T
CTCF RAD21 SMC3 TFAP2C
5441365
chr19 11248567 rs551134951 C A
CTCF ETS1 RAD21 SMC3 SPI1 TFAP2C ZNF263
5441366
chr19 11248708 rs538070666 G A
CTCF GATA2 TFAP2C
5441367
chr19 11248768 rs545675229 T G
ESR1 MAFK TFAP2C
5441368
chr19 11248782 rs74862316 C T
MAZ
5441369
chr19 11248897 rs75920121 C T no 5441370
chr19 11248918 rs189151874 G A,T no 5441371
Genes possibly regulated by vista28619[chr19:11248443-11248964]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr19 11200038 11244492 + LDLR ENSG00000130164.7 11200038 0.9 1.0 17029 51595
chr19 11242196 11266484 - SPC24 ENSG00000161888.7 11266484 0.92 1.0 17030 82480
chr19 11274943 11308467 - KANK2 ENSG00000197256.6 11308467 0.85 0.99 17031 40497
chr19 11348178 11352619 + C19orf80 ENSG00000130173.9 11348178 1.0 1.0 17033 786
Expression level of Genes
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miRNAs possibly regulated by vista28619[chr19:11248443-11248964]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results